Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01258 Brassica carinata HOM05D004114 ORTHO05D004667 7.8e-228 793.5 415 100.0
BolC3t21309H Brassica oleracea HOM05D004114 ORTHO05D004667 2.4e-168 595.9 412 81.3
Sp1g38010 Schrenkiella parvula HOM05D004114 ORTHO05D004667 8.3e-145 517.7 610 53.9
BcaB07g33582 Brassica carinata HOM05D004114 ORTHO05D004667 1.2e-143 513.8 608 53.5
Thhalv10011291m.g Eutrema salsugineum HOM05D004114 ORTHO05D004667 1.7e-142 510.0 610 53.8
BraA06t23464Z Brassica rapa HOM05D004114 ORTHO05D004667 4.3e-141 505.4 609 53.2
AL1G59170 Arabidopsis lyrata HOM05D004114 ORTHO05D004667 2.8e-140 502.7 609 52.5
BcaC08g43302 Brassica carinata HOM05D004114 ORTHO05D004667 1.4e-139 500.4 609 52.9
BolC6t35762H Brassica oleracea HOM05D004114 ORTHO05D004667 1.4e-139 500.4 609 52.9
AT1G51350 Arabidopsis thaliana HOM05D004114 ORTHO05D004667 5.7e-138 495.0 612 52.1
A06p02560 Brassica napus HOM05D004114 ORTHO05D004667 9.8e-138 494.2 593 53.0
C06p06490 Brassica napus HOM05D004114 ORTHO05D004667 9.2e-136 487.6 593 52.4
Carub.0001s4022 Capsella rubella HOM05D004114 ORTHO05D004667 2.3e-134 483.0 609 50.9
CARHR041420 Cardamine hirsuta HOM05D004114 ORTHO05D004667 3.3e-133 479.2 613 50.7
Aa31LG10G3520 Aethionema arabicum HOM05D004114 ORTHO05D004667 2.3e-131 473.0 614 49.7
THA.LOC104817907 Tarenaya hassleriana HOM05D004114 ORTHO05D004667 3.3e-109 399.4 617 43.9
TWI60G1569 Tripterygium wilfordii HOM05D004114 ORTHO05D004667 8.4e-97 358.2 574 40.8
TWI34G1345 Tripterygium wilfordii HOM05D004114 ORTHO05D004667 3.2e-96 356.3 384 53.4
Thecc.09G233600 Theobroma cacao HOM05D004114 ORTHO05D004667 3.0e-94 349.7 622 38.3
Gohir.D09G111100 Gossypium hirsutum HOM05D004114 ORTHO05D004667 3.9e-94 349.4 617 38.9
Gorai.006G128700 Gossypium raimondii HOM05D004114 ORTHO05D004667 5.1e-94 349.0 617 38.9
C03p89880 Brassica napus HOM05D004114 ORTHO05D004667 7.4e-93 345.1 420 56.2
Dinv36259 Davidia involucrata HOM05D004114 ORTHO05D004667 9.6e-93 344.7 371 53.6
Glyma.02G304000 Glycine max HOM05D004114 ORTHO05D004667 1.3e-92 344.4 368 52.4
Dinv22178 Davidia involucrata HOM05D004114 ORTHO05D004667 3.6e-92 342.8 614 38.8
QL01p004694 Quercus lobata HOM05D004114 ORTHO05D004667 4.8e-92 342.4 388 51.5
Ca_06427_v3 Cicer arietinum L. HOM05D004114 ORTHO05D004667 2.4e-91 340.1 367 51.0
GSVIVG01025259001 Vitis vinifera HOM05D004114 ORTHO05D004667 3.1e-91 339.7 606 38.6
Glyma.08G335400 Glycine max HOM05D004114 ORTHO05D004667 4.0e-91 339.3 366 52.7
Gohir.A09G114400 Gossypium hirsutum HOM05D004114 ORTHO05D004667 6.9e-91 338.6 621 38.2
COL.COLO4_07585 Corchorus olitorius HOM05D004114 ORTHO05D004667 2.0e-90 337.0 615 37.9
LjContig00081g0000990 Lotus japonicus HOM05D004114 ORTHO05D004667 5.8e-90 335.5 611 37.5
Duzib150G0789 Durio zibethinus HOM05D004114 ORTHO05D004667 1.7e-89 334.0 619 37.2
VMungo0647G1293 Vigna mungo HOM05D004114 ORTHO05D004667 1.7e-89 334.0 611 37.5
vmacro12717 Vaccinium macrocarpon HOM05D004114 ORTHO05D004667 2.2e-89 333.6 613 37.7
Glyma.18G070400 Glycine max HOM05D004114 ORTHO05D004667 3.8e-89 332.8 365 52.1
Phvul.006G062700 Phaseolus vulgaris HOM05D004114 ORTHO05D004667 3.8e-89 332.8 366 51.9
CSS0048735 Camellia sinensis var. sinensis HOM05D004114 ORTHO05D004667 4.9e-89 332.4 611 38.1
MELO3C015192.2 Cucumis melo HOM05D004114 ORTHO05D004667 6.4e-89 332.0 383 48.3
CsaV3_1G042830 Cucumis sativus L. HOM05D004114 ORTHO05D004667 6.4e-89 332.0 383 48.0
Medtr5g096860 Medicago truncatula HOM05D004114 ORTHO05D004667 6.4e-89 332.0 367 50.7
TPR.G1262 Trifolium pratense HOM05D004114 ORTHO05D004667 6.4e-89 332.0 367 50.1
Cfa009771 Carpinus fangiana HOM05D004114 ORTHO05D004667 2.4e-88 330.1 606 37.6
Lalb_Chr18g0050571 Lupinus albus HOM05D004114 ORTHO05D004667 3.2e-88 329.7 583 37.0
Lalb_Chr15g0082581 Lupinus albus HOM05D004114 ORTHO05D004667 5.5e-88 328.9 366 50.0
arahy.Tifrunner.gnm1.ann1.49TU8N Arachis hypogaea HOM05D004114 ORTHO05D004667 9.3e-88 328.2 366 48.6
arahy.Tifrunner.gnm1.ann1.Q5U408 Arachis hypogaea HOM05D004114 ORTHO05D004667 1.2e-87 327.8 366 48.9
Prupe.4G249300 Prunus persica HOM05D004114 ORTHO05D004667 7.9e-87 325.1 364 50.5
Sabra09G0038900 Salix brachista HOM05D004114 ORTHO05D004667 7.9e-87 325.1 383 50.4
Eucgr.J00767 Eucalyptus grandis HOM05D004114 ORTHO05D004667 1.8e-86 323.9 409 46.9
Nn2g15370 Nelumbo nucifera HOM05D004114 ORTHO05D004667 2.3e-86 323.6 378 49.5
Phvul.008G283500 Phaseolus vulgaris HOM05D004114 ORTHO05D004667 2.3e-86 323.6 611 36.0
Manes.06G164400 Manihot esculenta HOM05D004114 ORTHO05D004667 5.1e-86 322.4 383 47.8
MD03G1175100 Malus domestica HOM05D004114 ORTHO05D004667 1.5e-85 320.9 372 50.0
MD11G1193200 Malus domestica HOM05D004114 ORTHO05D004667 1.5e-85 320.9 368 49.5
arahy.Tifrunner.gnm1.ann1.4V7EDQ Arachis hypogaea HOM05D004114 ORTHO05D004667 2.5e-85 320.1 364 48.1
Psat2g005360 Pisum sativum HOM05D004114 ORTHO05D004667 4.3e-85 319.3 396 45.5
Actinidia23972 Actinidia chinensis HOM05D004114 ORTHO05D004667 7.4e-85 318.5 383 49.3
Ciclev10014795m.g Citrus clementina HOM05D004114 ORTHO05D004667 7.4e-85 318.5 385 48.6
Atru.chr3.2717 Acer truncatum HOM05D004114 ORTHO05D004667 9.6e-85 318.2 377 48.5
TAR633G1524 Trochodendron aralioides HOM05D004114 ORTHO05D004667 1.3e-84 317.8 383 48.3
Potri.009G053400 Populus trichocarpa HOM05D004114 ORTHO05D004667 1.6e-84 317.4 383 48.8
Oeu015664.1 Olea europaea HOM05D004114 ORTHO05D004667 2.1e-84 317.0 385 47.8
RcHm_v2.0_Chr5g0052041 Rosa chinensis HOM05D004114 ORTHO05D004667 2.1e-84 317.0 364 50.0
FvH4_3g28860 Fragaria vesca HOM05D004114 ORTHO05D004667 2.8e-84 316.6 364 49.5
Ah.06g194200 Amaranthus hybridus HOM05D004114 ORTHO05D004667 3.7e-84 316.2 368 46.7
TAR636G2716 Trochodendron aralioides HOM05D004114 ORTHO05D004667 8.1e-84 315.1 371 49.9
FAN16G1351 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.8e-83 313.9 364 49.2
FAN11G0384 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.5e-82 310.8 353 49.3
Nn7g36204 Nelumbo nucifera HOM05D004114 ORTHO05D004667 3.4e-82 309.7 601 36.4
FAN21G1677 Fragaria x ananassa HOM05D004114 ORTHO05D004667 5.8e-82 308.9 353 49.0
PGR119G0430 Punica granatum HOM05D004114 ORTHO05D004667 5.8e-82 308.9 387 45.5
Sed0020827 Sechium edule HOM05D004114 ORTHO05D004667 5.8e-82 308.9 349 50.1
Sopen11g025510 Solanum pennellii HOM05D004114 ORTHO05D004667 3.8e-81 306.2 367 48.8
PSO339G0497 Papaver somniferum HOM05D004114 ORTHO05D004667 4.9e-81 305.8 371 47.7
Solyc11g065750.2 Solanum lycopersicum HOM05D004114 ORTHO05D004667 8.4e-81 305.1 368 48.4
Peaxi162Scf00004g00237 Petunia axillaris HOM05D004114 ORTHO05D004667 1.4e-80 304.3 369 47.7
ClCG03G013250 Citrullus lanatus HOM05D004114 ORTHO05D004667 3.2e-80 303.1 383 45.7
Nitab4.5_0001587g0080 Nicotiana tabacum HOM05D004114 ORTHO05D004667 3.2e-80 303.1 366 47.0
Cc00_g05950 Coffea canephora HOM05D004114 ORTHO05D004667 9.3e-80 301.6 383 46.5
SGA_v2.0_scaffold42G16101 Striga asiatica HOM05D004114 ORTHO05D004667 2.1e-79 300.4 391 47.3
AUR62000120 Chenopodium quinoa HOM05D004114 ORTHO05D004667 6.0e-79 298.9 370 46.5
HanXRQChr07g0197461 Helianthus annuus HOM05D004114 ORTHO05D004667 1.1e-77 294.7 368 46.2
DCAR_029951 Daucus carota HOM05D004114 ORTHO05D004667 1.5e-77 294.3 385 45.5
Duzib168G0105 Durio zibethinus HOM05D004114 ORTHO05D004667 1.9e-77 293.9 605 36.0
CANSAT54G0770 Cannabis sativa HOM05D004114 ORTHO05D004667 3.3e-77 293.1 359 48.2
CAN.G599.3 Capsicum annuum HOM05D004114 ORTHO05D004667 3.3e-77 293.1 368 46.2
arahy.Tifrunner.gnm1.ann1.JLH2AW Arachis hypogaea HOM05D004114 ORTHO05D004667 5.7e-77 292.4 609 34.2
MSTRG.12468 Avicennia marina HOM05D004114 ORTHO05D004667 1.6e-76 290.8 371 45.0
CSS0035176 Camellia sinensis var. sinensis HOM05D004114 ORTHO05D004667 1.6e-76 290.8 611 35.7
arahy.Tifrunner.gnm1.ann1.V027MD Arachis hypogaea HOM05D004114 ORTHO05D004667 2.8e-76 290.0 609 33.8
Lsat_1_v5_gn_2_97760 Lactuca sativa HOM05D004114 ORTHO05D004667 6.3e-76 288.9 365 46.8
Aqoxy2G00130 Aquilegia oxysepala HOM05D004114 ORTHO05D004667 1.4e-75 287.7 358 45.5
unitig_699.g19135 Utricularia gibba HOM05D004114 ORTHO05D004667 6.9e-75 285.4 367 45.8
CDE05G0406 Ceratophyllum demersum HOM05D004114 ORTHO05D004667 1.5e-74 284.3 540 34.8
Cpa.g.sc84.54 Carica papaya HOM05D004114 ORTHO05D004667 2.0e-74 283.9 365 48.2
Hund07507 Selenicereus undatus HOM05D004114 ORTHO05D004667 5.9e-74 282.3 370 44.9
Oeu063322.2 Olea europaea HOM05D004114 ORTHO05D004667 7.6e-74 282.0 379 44.6
EL10Ac4g10249 Beta vulgaris HOM05D004114 ORTHO05D004667 1.7e-73 280.8 383 42.6
Migut.D00601 Erythranthe guttata HOM05D004114 ORTHO05D004667 5.0e-73 279.3 385 44.7
ECA238G2774 Erigeron canadensis HOM05D004114 ORTHO05D004667 2.5e-72 276.9 537 37.6
CDE05G0618 Ceratophyllum demersum HOM05D004114 ORTHO05D004667 3.2e-72 276.6 381 43.6
SalBow6G3263 Salvia bowleyana HOM05D004114 ORTHO05D004667 6.1e-71 272.3 428 40.2
AUR62019301 Chenopodium quinoa HOM05D004114 ORTHO05D004667 1.8e-70 270.8 380 42.6
FAN25G0168 Fragaria x ananassa HOM05D004114 ORTHO05D004667 6.3e-68 262.3 337 46.3
Sc16g0011490 Simmondsia chinensis HOM05D004114 ORTHO05D004667 8.2e-68 261.9 372 41.4
BraA08t32330Z Brassica rapa HOM05D004114 ORTHO05D004667 1.5e-66 257.7 248 63.7
Psat3g081440 Pisum sativum HOM05D004114 ORTHO05D004667 8.5e-65 251.9 292 47.9
C03p89900 Brassica napus HOM05D004114 ORTHO05D004667 4.2e-64 249.6 343 52.8
ATR0332G053 Amborella trichopoda HOM05D004114 ORTHO05D004667 3.6e-63 246.5 365 44.4
EL10Ac4g10252 Beta vulgaris HOM05D004114 ORTHO05D004667 6.7e-62 242.3 383 39.7
CiPaw.13G160800 Carya illinoinensis HOM05D004114 ORTHO05D004667 6.7e-62 242.3 518 34.7
BcaC08g43303 Brassica carinata HOM05D004114 ORTHO05D004667 1.1e-59 235.0 290 54.5
Haze_23137 Corylus avellana HOM05D004114 ORTHO05D004667 4.5e-58 229.6 306 46.1
SEGI_01130 Sequoiadendron giganteum HOM05D004114 ORTHO05D004667 7.7e-58 228.8 377 39.0
Actinidia06341 Actinidia chinensis HOM05D004114 ORTHO05D004667 2.2e-57 227.3 240 51.7
Zm00001eb166150 Zea mays HOM05D004114 ORTHO05D004667 6.5e-57 225.7 542 33.2
HPP92_020382 Vanilla planifolia HOM05D004114 ORTHO05D004667 1.9e-56 224.2 378 38.4
Lj1A330G24 Lonicera japonica HOM05D004114 ORTHO05D004667 7.2e-56 222.2 252 49.2
Mapoly0179s0020 Marchantia polymorpha HOM05D004114 ORTHO05D004667 9.7e-53 211.8 369 36.0
Zm00001eb115370 Zea mays HOM05D004114 ORTHO05D004667 2.2e-52 210.7 358 38.5
Pp3c9_10010 Physcomitrium patens HOM05D004114 ORTHO05D004667 5.0e-49 199.5 396 35.9
Oeu043295.1 Olea europaea HOM05D004114 ORTHO05D004667 7.2e-48 195.7 324 40.7
Nitab4.5_0002741g0170 Nicotiana tabacum HOM05D004114 ORTHO05D004667 3.0e-46 190.3 260 43.5
Pp3c15_7590 Physcomitrium patens HOM05D004114 ORTHO05D004667 4.4e-45 186.4 356 36.0
SMO347G0278 Selaginella moellendorffii HOM05D004114 ORTHO05D004667 4.1e-43 179.9 559 29.9
AagrBONN_evm.TU.Sc2ySwM_340.1837 Anthoceros agrestis HOM05D004114 ORTHO05D004667 5.3e-43 179.5 382 32.2
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 1.5e-37 161.4 212 46.2
Psat4g064240 Pisum sativum HOM05D004114 ORTHO05D004667 1.1e-32 145.2 267 36.3
Os11g0638900 Oryza sativa ssp. japonica HOM05D004114 ORTHO05D004667 4.4e-29 133.3 155 47.1
FAN23G2589 Fragaria x ananassa HOM05D004114 ORTHO05D004667 2.9e-25 120.6 134 49.3
Oeu054838.1 Olea europaea HOM05D004114 ORTHO05D004667 1.5e-21 108.2 108 51.9
A08p02990 Brassica napus HOM05D004114 ORTHO05D004667 4.4e-21 106.7 60 91.7
C03p89890 Brassica napus HOM05D004114 ORTHO05D004667 2.2e-20 104.4 65 78.5
Psat5g252640 Pisum sativum HOM05D004114 ORTHO05D004667 2.9e-20 104.0 163 41.1
Haze_23136 Corylus avellana HOM05D004114 ORTHO05D004667 9.2e-19 99.0 96 52.1
C03p89870 Brassica napus HOM05D004114 ORTHO05D004667 2.7e-18 97.4 49 98.0
Cpa.g.sc84.55 Carica papaya HOM05D004114 ORTHO05D004667 2.6e-13 80.9 79 57.0
FvH4_1g30480 Fragaria vesca HOM05D001826 ORTHO05D015538 9.8e-13 79.0 97 48.5
Actinidia06340 Actinidia chinensis HOM05D004114 ORTHO05D004667 6.4e-12 76.3 72 54.2
FAN28G1325 Fragaria x ananassa HOM05D004114 ORTHO05D004667 6.4e-12 76.3 57 63.2
FAN19G0092 Fragaria x ananassa HOM05D004114 ORTHO05D004667 8.3e-12 75.9 139 35.3
TAR636G0924 Trochodendron aralioides HOM05D004114 ORTHO05D004667 3.2e-11 73.9 64 56.2
FvH4_1g27570 Fragaria vesca HOM05D004114 ORTHO05D004667 5.4e-11 73.2 55 61.8
FvH4_7g05120 Fragaria vesca HOM05D004114 ORTHO05D004667 9.2e-11 72.4 63 52.4
FAN06G1142 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.2e-10 72.0 55 60.0
FAN26G0366 Fragaria x ananassa HOM05D004114 ORTHO05D004667 2.0e-10 71.2 54 61.1
FAN19G1745 Fragaria x ananassa HOM05D004114 ORTHO05D004667 3.5e-10 70.5 54 61.1
Lj1A330G26 Lonicera japonica HOM05D004114 ORTHO05D004667 3.5e-10 70.5 74 55.4
FvH4_1g27340 Fragaria vesca HOM05D004114 ORTHO05D004667 8.6e-09 65.9 114 38.6
arahy.Tifrunner.gnm1.ann1.HDR10P Arachis hypogaea HOM05D004114 ORTHO05D004667 1.2e-07 62.0 97 39.2
arahy.Tifrunner.gnm1.ann1.LY7CXU Arachis hypogaea HOM05D004114 ORTHO05D004667 3.6e-07 60.5 70 41.4
Dinv18208 Davidia involucrata HOM05D000103 ORTHO05D000049 3.6e-07 60.5 41 68.3
EL10Ac3g06409 Beta vulgaris HOM05D004114 ORTHO05D004667 4.0e-06 57.0 55 43.6
arahy.Tifrunner.gnm1.ann1.WKB59G Arachis hypogaea HOM05D004114 ORTHO05D004667 5.2e-06 56.6 70 40.0


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