Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-114 415.6 225 100.0
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-81 305.4 233 76.8
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-66 255.8 238 65.5
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-56 221.1 238 57.1
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.8e-53 213.4 233 56.7
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-53 212.6 237 57.0
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 5.8e-52 208.4 238 58.4
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 4.9e-51 205.3 238 58.0
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-51 204.5 232 56.9
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-49 199.5 238 56.7
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-47 191.4 212 56.1
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-41 172.9 206 56.8
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-41 171.4 240 50.0
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-35 153.3 224 47.3
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-33 146.7 137 60.6
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-32 142.9 226 44.2
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 7.4e-31 138.3 152 53.9
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 4.8e-30 135.6 215 45.1
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 1.1e-26 124.4 233 38.6
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 2.1e-25 120.2 166 53.6
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.6e-25 119.4 148 50.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-24 115.9 193 42.5
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-23 111.7 212 41.5
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.3e-22 110.9 219 37.0
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-22 110.5 231 39.8
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-22 110.2 219 39.7
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 6.3e-22 108.6 219 36.5
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-21 106.3 231 38.5
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 4.1e-21 105.9 151 47.0
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 5.3e-21 105.5 198 40.4
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-21 105.1 206 40.3
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-21 104.8 204 38.7
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-20 104.4 182 41.2
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 3.4e-20 102.8 225 37.8
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 3.4e-20 102.8 151 45.7
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-19 100.5 185 42.7
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 2.2e-19 100.1 203 40.4
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-19 98.2 226 37.2
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 1.1e-18 97.8 99 56.6
BcaNung02556 Brassica carinata HOM05D000496 ORTHO05D095281 1.4e-18 97.4 101 58.4
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-18 97.1 217 37.8
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-18 95.9 234 36.3
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 5.5e-18 95.5 196 40.3
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 7.2e-18 95.1 199 39.2
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 9.4e-18 94.7 199 39.2
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 9.4e-18 94.7 201 39.8
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-17 94.4 232 36.2
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-17 92.8 154 42.9
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 6.1e-17 92.0 199 37.2
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 7.9e-17 91.7 214 36.4
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 7.9e-17 91.7 188 38.8
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 7.9e-17 91.7 188 38.8
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.6e-15 86.7 139 41.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 4.8e-14 82.4 176 38.1
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.3e-14 82.0 198 33.8
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 8.2e-14 81.6 130 43.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 226 34.5
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-13 80.9 183 36.1
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 1.4e-13 80.9 130 43.1
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 1.0e-11 74.7 83 53.0
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-11 73.9 228 34.6
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-11 73.9 135 41.5
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 1.7e-11 73.9 128 43.0
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.7e-11 73.9 143 37.1
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-11 73.2 211 33.2
BolC7t42802H Brassica oleracea HOM05D000496 ORTHO05D104510 1.1e-10 71.2 71 56.3
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 1.5e-10 70.9 140 38.6
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-10 70.5 202 34.2
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 2.5e-10 70.1 134 38.1
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 7.2e-10 68.6 202 33.7
BcaB04g17612 Brassica carinata HOM05D000496 ORTHO05D090729 1.2e-09 67.8 235 29.4
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-09 67.4 226 32.3
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 3.6e-09 66.2 184 34.8
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 3.6e-09 66.2 111 40.5
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 4.7e-09 65.9 150 36.7
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 4.7e-09 65.9 216 32.9
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-09 65.5 209 33.5
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 1.4e-08 64.3 100 47.0
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 1.4e-08 64.3 222 29.7
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-08 63.5 228 32.0
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-08 63.2 199 34.7
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 5.2e-08 62.4 168 33.3
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 8.8e-08 61.6 61 55.7
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 61.2 226 31.0
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 60.8 53 58.5
BcaC06g36712 Brassica carinata HOM05D000496 ORTHO05D032668 1.5e-07 60.8 112 42.0
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.0e-07 60.5 152 38.8
BcaC08g44104 Brassica carinata HOM05D010392 ORTHO05D000411 2.6e-07 60.1 155 32.3
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 2.6e-07 60.1 62 53.2
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 3.3e-07 59.7 82 48.8
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-07 58.9 211 33.2
BcaC09g50699 Brassica carinata HOM05D010392 ORTHO05D091246 5.7e-07 58.9 144 33.3
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-07 58.5 217 30.9
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-06 55.8 212 31.6
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 4.8e-06 55.8 126 38.1
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 4.8e-06 55.8 107 41.1
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 6.3e-06 55.5 97 40.2
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-06 55.1 231 30.3


User provided reference genes

Program Settings