Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01110 Brassica carinata HOM05D008236 ORTHO05D010394 3.3e-42 174.5 79 100.0
BolC3t21132H Brassica oleracea HOM05D008236 ORTHO05D010394 3.3e-42 174.5 79 100.0
C03p88220 Brassica napus HOM05D008236 ORTHO05D010394 1.6e-41 172.2 79 98.7
BraA08t33846Z Brassica rapa HOM05D008236 ORTHO05D010394 2.3e-40 168.3 79 96.2
A08p18850 Brassica napus HOM05D008236 ORTHO05D010394 5.2e-40 167.2 79 94.9
BcaB03g12677 Brassica carinata HOM05D008236 ORTHO05D010394 3.0e-35 151.4 79 86.1
C03p88270 Brassica napus HOM05D008236 ORTHO05D010394 5.4e-29 130.6 80 76.2
BolC3t21135H Brassica oleracea HOM05D008236 ORTHO05D010394 1.0e-27 126.3 80 73.8
A08p18860 Brassica napus HOM05D008236 ORTHO05D010394 3.0e-27 124.8 80 72.5
BraA08t33847Z Brassica rapa HOM05D008236 ORTHO05D010394 3.0e-27 124.8 80 72.5
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 7.3e-26 120.2 79 68.4
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 1.7e-22 109.0 79 64.6
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 1.7e-22 109.0 79 64.6
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 1.7e-22 109.0 79 64.6
A08p21920 Brassica napus HOM05D008236 ORTHO05D010394 5.4e-21 104.0 80 60.0
BraA08t34144Z Brassica rapa HOM05D008236 ORTHO05D010394 5.4e-21 104.0 80 60.0
BraA08t34143Z Brassica rapa HOM05D008236 ORTHO05D010394 1.6e-20 102.4 80 61.2
BolC3t20299H Brassica oleracea HOM05D008236 ORTHO05D010394 2.7e-20 101.7 80 60.0
A08p21900 Brassica napus HOM05D008236 ORTHO05D010394 3.5e-20 101.3 80 60.0
C03p80550 Brassica napus HOM05D008236 ORTHO05D010394 4.6e-20 100.9 80 60.0
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 1.3e-19 99.4 79 59.5
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 8.7e-19 96.7 79 59.5
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.9e-18 95.5 79 59.5
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 4.3e-18 94.4 79 58.2
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 3.6e-17 91.3 79 57.0
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 6.2e-17 90.5 79 57.0
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 8.1e-17 90.1 79 54.4
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.4e-16 88.6 80 60.0
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.0e-16 87.8 79 55.7
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 5.3e-16 87.4 79 55.7
CARHR237080 Cardamine hirsuta HOM05D008236 ORTHO05D010394 6.9e-16 87.0 79 59.5
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 9.0e-16 86.7 79 54.4
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 9.0e-16 86.7 79 54.4
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.5e-15 84.3 79 55.7
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.2e-14 82.0 80 55.0
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 1.2e-12 76.3 79 51.9
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 1.3e-11 72.8 83 49.4
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 5.6e-10 67.4 79 41.8
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.0e-08 61.2 79 44.3
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.9e-08 60.5 81 45.7
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 9.0e-08 60.1 79 40.5
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 4.5e-07 57.8 77 41.6
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 4.5e-07 57.8 80 40.0
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 4.5e-07 57.8 77 41.6
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 4.5e-07 57.8 77 41.6
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 4.5e-07 57.8 80 40.0
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 4.5e-07 57.8 77 41.6
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 7.6e-07 57.0 80 38.8
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 1.3e-06 56.2 80 38.8
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 2.2e-06 55.5 85 40.0
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 2.9e-06 55.1 79 40.5
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 2.9e-06 55.1 79 40.5
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.8e-06 54.7 80 42.5
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.4e-06 53.9 81 43.2
C07p39500 Brassica napus HOM05D010086 ORTHO05D010053 6.4e-06 53.9 79 35.4
BolC7t44469H Brassica oleracea HOM05D010086 ORTHO05D010053 6.4e-06 53.9 79 35.4
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 8.4e-06 53.5 80 36.2
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 8.4e-06 53.5 80 36.2
CARHR183110 Cardamine hirsuta HOM05D010086 ORTHO05D010053 8.4e-06 53.5 79 35.4
Thhalv10005401m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 8.4e-06 53.5 79 38.0


User provided reference genes

Program Settings