Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01098 Brassica carinata HOM05D000043 ORTHO05D093991 7.7e-42 173.3 83 100.0
Sp2g27550 Schrenkiella parvula HOM05D000043 ORTHO05D002888 8.8e-14 80.1 51 78.4
AL8G41840 Arabidopsis lyrata HOM05D000043 ORTHO05D002888 4.4e-13 77.8 54 72.2
Carub.0008s2526 Capsella rubella HOM05D000043 ORTHO05D002888 5.7e-13 77.4 51 76.5
AT5G64470 Arabidopsis thaliana HOM05D000043 ORTHO05D002888 1.3e-12 76.3 51 74.5
C03p61770 Brassica napus HOM05D000043 ORTHO05D002888 1.1e-11 73.2 51 72.5
BolC3t18438H Brassica oleracea HOM05D000043 ORTHO05D002888 1.1e-11 73.2 51 72.5
BraA06t26060Z Brassica rapa HOM05D000043 ORTHO05D002888 1.1e-11 73.2 51 72.5
BcaC01g02684 Brassica carinata HOM05D000043 ORTHO05D002888 1.4e-11 72.8 51 70.6
CARHR278430 Cardamine hirsuta HOM05D000043 ORTHO05D002888 1.4e-11 72.8 51 70.6
Aa31LG1G17440 Aethionema arabicum HOM05D000043 ORTHO05D002888 4.1e-11 71.2 51 70.6
A06p31210 Brassica napus HOM05D000043 ORTHO05D002888 3.5e-10 68.2 53 69.8
CSS0036096 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D002888 1.0e-09 66.6 52 65.4
Potri.001G286100 Populus trichocarpa HOM05D000043 ORTHO05D002888 1.3e-09 66.2 54 61.1
THA.LOC104799667 Tarenaya hassleriana HOM05D000043 ORTHO05D002888 1.3e-09 66.2 51 66.7
Sabra16G0178600 Salix brachista HOM05D000043 ORTHO05D002888 2.2e-09 65.5 54 61.1
CSS0022705 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D002888 2.9e-09 65.1 52 63.5
Thecc.02G037400 Theobroma cacao HOM05D000043 ORTHO05D002888 3.8e-09 64.7 51 62.7
Actinidia00327 Actinidia chinensis HOM05D000043 ORTHO05D002888 6.5e-09 63.9 51 62.7
Hma1.2p1_0703F.1_g206270 Hydrangea macrophylla HOM05D000043 ORTHO05D002888 6.5e-09 63.9 51 64.7
Cpa.g.sc20.52 Carica papaya HOM05D000043 ORTHO05D002888 8.5e-09 63.5 51 62.7
FAN20G1731 Fragaria x ananassa HOM05D000043 ORTHO05D002888 8.5e-09 63.5 52 61.5
Gohir.A01G178700 Gossypium hirsutum HOM05D000043 ORTHO05D002888 8.5e-09 63.5 51 62.7
Gohir.D01G169500 Gossypium hirsutum HOM05D000043 ORTHO05D002888 8.5e-09 63.5 51 62.7
Gorai.002G211100 Gossypium raimondii HOM05D000043 ORTHO05D002888 8.5e-09 63.5 51 62.7
Hma1.2p1_0435F.1_g152550 Hydrangea macrophylla HOM05D000043 ORTHO05D002888 8.5e-09 63.5 51 60.8
Ciclev10028582m.g Citrus clementina HOM05D000043 ORTHO05D002888 1.1e-08 63.2 54 57.4
Migut.B00515 Erythranthe guttata HOM05D000043 ORTHO05D002888 1.5e-08 62.8 51 58.8
GSVIVG01005668001 Vitis vinifera HOM05D000043 ORTHO05D002888 1.5e-08 62.8 51 60.8
Haze_10367 Corylus avellana HOM05D000043 ORTHO05D002888 1.9e-08 62.4 51 60.8
Ca_18416_v3 Cicer arietinum L. HOM05D000043 ORTHO05D002888 2.5e-08 62.0 51 58.8
Dinv16037 Davidia involucrata HOM05D000043 ORTHO05D002888 2.5e-08 62.0 51 62.7
Lalb_Chr16g0383131 Lupinus albus HOM05D000043 ORTHO05D002888 2.5e-08 62.0 51 58.8
Rhsim05G0095300 Rhododendron simsii HOM05D000043 ORTHO05D002888 2.5e-08 62.0 51 62.7
RcHm_v2.0_Chr6g0269281 Rosa chinensis HOM05D000043 ORTHO05D002888 2.5e-08 62.0 51 62.7
Duzib052G0824 Durio zibethinus HOM05D000043 ORTHO05D002888 3.2e-08 61.6 51 62.7
Peaxi162Scf00299g00237 Petunia axillaris HOM05D000043 ORTHO05D002888 3.2e-08 61.6 51 60.8
arahy.Tifrunner.gnm1.ann1.QX5YQP Arachis hypogaea HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 54.9
arahy.Tifrunner.gnm1.ann1.Z3ANCQ Arachis hypogaea HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 54.9
Glyma.08G064800 Glycine max HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 58.8
Oeu008550.1 Olea europaea HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 56.9
PSO675G7183 Papaver somniferum HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 58.8
TPR.G16894 Trifolium pratense HOM05D000043 ORTHO05D002888 4.2e-08 61.2 51 58.8
CSS0003193 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 58.8
CSS0003277 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 58.8
CiPaw.05G026100 Carya illinoinensis HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 58.8
Ca_18431_v3 Cicer arietinum L. HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 56.9
Lsat_1_v5_gn_7_83160 Lactuca sativa HOM05D000043 ORTHO05D002888 5.5e-08 60.8 54 57.4
Lj5A225G69 Lonicera japonica HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 64.7
Solyc01g106370.3 Solanum lycopersicum HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 58.8
Sopen01g048740 Solanum pennellii HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 58.8
TAR376G0145 Trochodendron aralioides HOM05D000043 ORTHO05D002888 5.5e-08 60.8 51 56.9
FAN27G0864 Fragaria x ananassa HOM05D000043 ORTHO05D002888 7.2e-08 60.5 52 59.6
PGSC0003DMG400003117 Solanum tuberosum HOM05D000043 ORTHO05D002888 7.2e-08 60.5 51 58.8
TWI14G0696 Tripterygium wilfordii HOM05D000043 ORTHO05D002888 7.2e-08 60.5 51 54.9
CANSAT54G2259 Cannabis sativa HOM05D000043 ORTHO05D002888 9.4e-08 60.1 51 58.8
CDE01G0583 Ceratophyllum demersum HOM05D000043 ORTHO05D002888 9.4e-08 60.1 54 57.4
Hund06481 Selenicereus undatus HOM05D000043 ORTHO05D002888 9.4e-08 60.1 51 58.8
Ah.01g024220 Amaranthus hybridus HOM05D000043 ORTHO05D002888 1.2e-07 59.7 51 56.9
Nitab4.5_0010352g0040 Nicotiana tabacum HOM05D000043 ORTHO05D002888 1.2e-07 59.7 51 56.9
CAN.G504.55 Capsicum annuum HOM05D000043 ORTHO05D002888 1.6e-07 59.3 51 56.9
Lalb_Chr09g0327021 Lupinus albus HOM05D000043 ORTHO05D002888 1.6e-07 59.3 51 56.9
Nitab4.5_0009020g0040 Nicotiana tabacum HOM05D000043 ORTHO05D002888 1.6e-07 59.3 51 56.9
SEGI_06634 Sequoiadendron giganteum HOM05D000043 ORTHO05D002888 1.6e-07 59.3 51 54.9
Duzib132G1151 Durio zibethinus HOM05D000043 ORTHO05D002888 2.1e-07 58.9 51 60.8
Lj4g0014730 Lotus japonicus HOM05D000043 ORTHO05D002888 2.1e-07 58.9 51 56.9
Prupe.8G076500 Prunus persica HOM05D000043 ORTHO05D002888 2.1e-07 58.9 52 57.7
TAR381G0162 Trochodendron aralioides HOM05D000043 ORTHO05D002888 2.1e-07 58.9 51 56.9
CsaV3_7G007380 Cucumis sativus L. HOM05D000043 ORTHO05D002888 2.7e-07 58.5 51 54.9
Manes.10G092300 Manihot esculenta HOM05D000043 ORTHO05D002888 2.7e-07 58.5 54 57.4
PSO675G3113 Papaver somniferum HOM05D000043 ORTHO05D002888 2.7e-07 58.5 51 56.9
Phvul.002G216000 Phaseolus vulgaris HOM05D000043 ORTHO05D002888 2.7e-07 58.5 51 54.9
PGR142G1902 Punica granatum HOM05D000043 ORTHO05D002888 2.7e-07 58.5 51 52.9
Sc18g0007200 Simmondsia chinensis HOM05D000043 ORTHO05D002888 2.7e-07 58.5 51 56.9
AUR62030914 Chenopodium quinoa HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 56.9
ClCG09G016400 Citrullus lanatus HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
Eucgr.I02565 Eucalyptus grandis HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
Medtr4g092830 Medicago truncatula HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
Nn5g29759 Nelumbo nucifera HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
Sed0010680 Sechium edule HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
HPP92_025506 Vanilla planifolia HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
HPP92_025529 Vanilla planifolia HOM05D000043 ORTHO05D002888 3.6e-07 58.2 51 54.9
FAN15G1370 Fragaria x ananassa HOM05D000043 ORTHO05D002888 4.7e-07 57.8 52 59.6
Glyma.07G184600 Glycine max HOM05D000043 ORTHO05D002888 4.7e-07 57.8 51 54.9
unitig_46.g18840 Utricularia gibba HOM05D000043 ORTHO05D002888 4.7e-07 57.8 51 58.8
EL10Ac9g22133 Beta vulgaris HOM05D000043 ORTHO05D002888 6.1e-07 57.4 51 56.9
AUR62043645 Chenopodium quinoa HOM05D000043 ORTHO05D002888 6.1e-07 57.4 51 54.9
MD10G1057700 Malus domestica HOM05D000043 ORTHO05D002888 6.1e-07 57.4 52 57.7
SGA_v2.0_scaffold342G49398 Striga asiatica HOM05D000043 ORTHO05D002888 6.1e-07 57.4 51 56.9
Cc02_g20530 Coffea canephora HOM05D000043 ORTHO05D002888 8.0e-07 57.0 51 52.9
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 1.0e-06 56.6 51 54.9
AUR62027074 Chenopodium quinoa HOM05D000043 ORTHO05D002888 1.0e-06 56.6 51 54.9
MELO3C018564.2 Cucumis melo HOM05D000043 ORTHO05D002888 1.0e-06 56.6 51 52.9
DCAR_029283 Daucus carota HOM05D000043 ORTHO05D002888 1.0e-06 56.6 51 54.9
QL11p026756 Quercus lobata HOM05D000043 ORTHO05D002888 1.0e-06 56.6 54 55.6
Sed0006774 Sechium edule HOM05D000043 ORTHO05D002888 1.4e-06 56.2 51 54.9
ATR0820G156 Amborella trichopoda HOM05D000043 ORTHO05D002888 1.8e-06 55.8 51 54.9
VMungo0251G1165 Vigna mungo HOM05D000043 ORTHO05D002888 2.3e-06 55.5 51 52.9
Atru.chr6.1373 Acer truncatum HOM05D000043 ORTHO05D002888 4.0e-06 54.7 51 54.9
MBI16_g17832_MAGBIO Magnolia biondii HOM05D000043 ORTHO05D002888 8.8e-06 53.5 51 51.0
SalBow6G7053 Salvia bowleyana HOM05D000043 ORTHO05D002888 8.8e-06 53.5 51 52.9


User provided reference genes

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