Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 1.8e-288 995.3 532 100.0
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 1.8e-288 995.3 532 100.0
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 2.8e-281 971.5 539 97.2
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 1.2e-265 919.5 532 93.2
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 9.9e-263 909.8 554 89.5
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 3.9e-235 818.1 550 83.1
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 2.0e-223 779.2 555 78.7
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 1.2e-220 770.0 564 79.6
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 6.3e-201 704.5 558 72.9
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 2.2e-193 679.5 562 72.1
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 1.7e-190 669.8 574 72.3
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 2.7e-183 646.0 532 72.0
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 1.1e-181 640.6 546 71.8
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 1.3e-177 627.1 566 69.4
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 2.5e-173 612.8 543 70.3
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 2.5e-173 612.8 543 70.3
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 1.2e-172 610.5 571 66.7
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 3.4e-170 602.4 547 68.6
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 1.9e-165 586.6 476 73.1
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 7.6e-122 441.8 606 52.3
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 8.2e-116 421.8 629 48.5
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 1.2e-58 231.9 324 46.6
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 1.5e-56 224.9 598 36.8
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 5.6e-56 223.0 598 36.5
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 7.3e-56 222.6 622 33.9
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 8.0e-55 219.2 548 37.0
BraA03t15110Z Brassica rapa HOM05D005642 ORTHO05D006672 2.3e-54 217.6 204 69.6
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 2.6e-53 214.2 600 34.3
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 2.2e-52 211.1 633 34.0
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 3.2e-51 207.2 327 44.3
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 5.4e-51 206.5 329 45.0
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 7.8e-50 202.6 324 46.0
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.0e-49 200.7 418 37.6
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 3.9e-49 200.3 583 34.5
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 1.1e-48 198.7 325 43.1
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 1.5e-48 198.4 592 34.5
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 9.5e-48 195.7 658 32.7
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.6e-47 193.7 316 44.3
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 6.2e-47 193.0 576 35.2
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 8.1e-47 192.6 576 34.4
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 3.1e-46 190.7 317 42.9
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 5.2e-46 189.9 318 43.7
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 6.8e-46 189.5 335 42.7
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 2.6e-45 187.6 338 45.3
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 1.3e-44 185.3 317 42.6
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 2.2e-44 184.5 372 39.0
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 8.3e-44 182.6 542 34.5
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 1.1e-43 182.2 324 42.3
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 1.4e-43 181.8 612 31.7
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 1.9e-43 181.4 517 36.2
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 1.9e-43 181.4 543 34.8
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 2.1e-42 177.9 469 35.8
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 3.5e-42 177.2 649 33.1
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 7.8e-42 176.0 313 41.5
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 1.3e-41 175.3 577 32.6
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 3.9e-41 173.7 397 38.5
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 3.9e-41 173.7 327 42.5
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 1.1e-40 172.2 337 41.8
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 7.3e-40 169.5 624 30.4
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 1.2e-39 168.7 327 41.6
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 2.8e-39 167.5 575 33.0
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 2.8e-39 167.5 449 35.6
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 3.6e-39 167.2 292 42.1
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 4.7e-39 166.8 586 32.9
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 1.4e-38 165.2 412 36.7
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 4.0e-38 163.7 601 32.1
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 5.2e-38 163.3 335 36.1
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 2.6e-37 161.0 279 42.7
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 2.6e-37 161.0 569 32.0
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 3.4e-37 160.6 579 32.8
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 5.8e-37 159.8 397 35.8
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 2.2e-36 157.9 299 39.8
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 2.2e-36 157.9 587 32.7
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 8.4e-36 156.0 558 32.3
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 1.1e-35 155.6 584 32.2
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 1.4e-35 155.2 407 37.1
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 1.4e-35 155.2 307 40.1
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 2.4e-35 154.5 574 31.5
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 3.2e-35 154.1 606 30.4
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 5.4e-35 153.3 502 33.5
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.7e-34 151.0 280 41.4
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 7.8e-34 149.4 403 35.7
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 1.7e-33 148.3 315 38.1
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 1.7e-33 148.3 397 37.3
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 1.1e-32 145.6 358 34.6
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.9e-32 144.8 547 31.6
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 4.3e-32 143.7 299 35.5
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 4.3e-32 143.7 295 40.3
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 2.1e-31 141.4 336 39.6
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 2.1e-31 141.4 283 40.6
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 2.1e-31 141.4 427 33.5
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 3.6e-31 140.6 511 30.3
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 3.6e-31 140.6 306 38.9
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 6.2e-31 139.8 367 35.4
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 2.4e-30 137.9 438 32.4
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 3.2e-27 127.5 470 32.3
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 2.1e-26 124.8 449 29.6
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 6.0e-26 123.2 517 28.6
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 1.7e-25 121.7 301 35.5
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 6.6e-25 119.8 377 30.5
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 8.7e-25 119.4 491 30.1
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 8.7e-25 119.4 173 42.2
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 8.7e-25 119.4 416 30.0
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 8.7e-25 119.4 550 30.0
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 3.3e-24 117.5 408 30.4
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 1.3e-23 115.5 416 30.8
AUR62009051 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.8e-23 114.4 360 31.7
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 6.9e-22 109.8 461 28.6
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 1.5e-21 108.6 430 30.0
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 7.6e-21 106.3 183 39.9
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 1.1e-19 102.4 295 32.2
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 2.4e-19 101.3 612 27.9
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 3.2e-19 100.9 421 29.7
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 7.1e-19 99.8 364 29.7
Atru.chr7.2632 Acer truncatum HOM05D005642 ORTHO05D006672 4.6e-18 97.1 164 46.3
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 7.9e-18 96.3 141 42.6
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 1.9e-16 91.7 308 30.2
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 4.8e-15 87.0 53 77.4
CDE07G1180 Ceratophyllum demersum HOM05D005642 ORTHO05D006672 1.1e-14 85.9 231 30.3
ECA240G1730 Erigeron canadensis HOM05D000542 ORTHO05D006672 6.9e-14 83.2 346 28.6
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 1.5e-13 82.0 401 26.2
unitig_0.g2821 Utricularia gibba HOM05D005642 ORTHO05D006672 4.5e-13 80.5 105 46.7
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 6.4e-12 76.6 376 30.3
MD00G1205700 Malus domestica HOM05D005642 ORTHO05D006672 6.4e-12 76.6 67 62.7
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 3.2e-11 74.3 279 31.9
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 1.2e-10 72.4 163 36.8
Os04g0655600 Oryza sativa ssp. japonica HOM05D005642 ORTHO05D006672 4.6e-10 70.5 301 29.6
A02p30240 Brassica napus HOM05D003055 ORTHO05D027220 1.3e-09 68.9 47 70.2
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 5.1e-09 67.0 90 42.2
HanXRQChr03g0082481 Helianthus annuus HOM05D005642 ORTHO05D006672 8.7e-09 66.2 197 34.5
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 1.1e-08 65.9 241 27.4
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 1.5e-08 65.5 90 41.1
DCAR_000668 Daucus carota HOM05D005642 ORTHO05D006672 5.6e-08 63.5 334 26.0
SEGI_30019 Sequoiadendron giganteum HOM05D003044 ORTHO05D006672 2.1e-07 61.6 263 30.4
HPP92_018374 Vanilla planifolia HOM05D005642 ORTHO05D006672 2.8e-07 61.2 361 26.6
BraA01t02912Z Brassica rapa HOM05D005642 ORTHO05D006672 4.8e-07 60.5 70 45.7
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 2.4e-06 58.2 260 24.2
arahy.Tifrunner.gnm1.ann1.GW4HJP Arachis hypogaea HOM05D000013 ORTHO05D021469 3.1e-06 57.8 99 36.4
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 4.0e-06 57.4 267 28.5
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 5.3e-06 57.0 232 28.0


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