Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 1.1e-80 303.1 145 100.0
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 2.1e-63 245.7 117 98.3
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 1.4e-62 243.0 117 98.3
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 1.4e-62 243.0 117 98.3
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 5.2e-62 241.1 117 97.4
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 5.2e-62 241.1 117 97.4
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 5.2e-62 241.1 117 97.4
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 5.2e-62 241.1 117 97.4
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 8.9e-62 240.4 117 96.6
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 8.9e-62 240.4 117 96.6
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 8.9e-62 240.4 117 96.6
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 8.9e-62 240.4 117 96.6
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 8.9e-62 240.4 117 96.6
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 1.2e-61 240.0 117 97.4
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 1.5e-61 239.6 117 96.6
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 3.4e-61 238.4 117 96.6
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 3.4e-61 238.4 117 95.7
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 4.4e-61 238.0 117 95.7
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 8.3e-60 233.8 117 94.9
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 3.0e-57 225.3 152 75.7
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 6.6e-57 224.2 117 88.0
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 6.2e-55 217.6 112 91.1
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 1.8e-54 216.1 117 85.5
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 3.2e-51 205.3 115 82.6
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 5.4e-51 204.5 112 83.0
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 7.1e-51 204.1 115 82.6
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 7.1e-51 204.1 115 81.7
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 7.1e-51 204.1 115 81.7
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 7.1e-51 204.1 115 81.7
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 1.6e-50 203.0 115 81.7
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.7e-50 202.2 115 81.7
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.5e-50 201.8 115 80.9
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 6.0e-50 201.1 115 81.7
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 6.0e-50 201.1 115 80.9
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 6.0e-50 201.1 115 80.9
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 7.8e-50 200.7 116 80.2
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.0e-49 200.3 115 80.0
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 1.7e-49 199.5 115 80.0
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.7e-49 199.5 115 80.0
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 2.3e-49 199.1 115 80.9
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 2.3e-49 199.1 115 80.9
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 2.3e-49 199.1 113 79.6
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 3.0e-49 198.7 115 80.9
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 3.0e-49 198.7 115 80.0
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 3.9e-49 198.4 115 79.1
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 5.1e-49 198.0 112 81.2
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 5.1e-49 198.0 115 79.1
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 6.6e-49 197.6 118 78.0
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 8.7e-49 197.2 113 80.5
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.1e-48 196.8 115 78.3
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 1.1e-48 196.8 124 75.0
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.9e-48 196.1 115 79.1
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.9e-48 196.1 112 82.1
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 1.9e-48 196.1 119 73.9
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 3.3e-48 195.3 113 77.9
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 3.3e-48 195.3 115 79.1
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 5.6e-48 194.5 112 81.2
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 1.2e-47 193.4 112 79.5
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.6e-47 193.0 113 77.9
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 1.6e-47 193.0 112 78.6
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.8e-47 192.2 113 77.0
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 2.8e-47 192.2 115 78.3
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 3.6e-47 191.8 112 77.7
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 3.6e-47 191.8 111 77.5
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 4.7e-47 191.4 111 79.3
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 6.2e-47 191.0 111 78.4
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 6.2e-47 191.0 112 76.8
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 6.2e-47 191.0 110 78.2
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 8.1e-47 190.7 113 76.1
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 8.1e-47 190.7 116 74.1
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 8.1e-47 190.7 112 75.0
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 8.1e-47 190.7 112 75.0
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 1.1e-46 190.3 112 78.6
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 1.4e-46 189.9 113 77.0
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.8e-46 189.5 113 75.2
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 2.4e-46 189.1 113 76.1
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.4e-46 189.1 117 76.9
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 4.0e-46 188.3 112 78.6
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 5.2e-46 188.0 112 75.9
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 5.2e-46 188.0 120 72.5
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.2e-46 188.0 114 75.4
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 6.9e-46 187.6 112 75.9
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 6.9e-46 187.6 114 74.6
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 9.0e-46 187.2 113 76.1
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.2e-45 186.8 114 76.3
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.2e-45 186.8 114 76.3
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 1.5e-45 186.4 114 73.7
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 2.0e-45 186.0 115 73.9
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 2.6e-45 185.7 112 74.1
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 3.4e-45 185.3 113 75.2
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 7.6e-45 184.1 104 82.7
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 7.6e-45 184.1 115 75.7
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 7.6e-45 184.1 108 77.8
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 7.6e-45 184.1 113 73.5
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 7.6e-45 184.1 112 69.6
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 9.9e-45 183.7 108 76.9
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 2.2e-44 182.6 114 71.9
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 4.9e-44 181.4 112 76.8
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 6.4e-44 181.0 114 71.9
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 6.4e-44 181.0 111 74.8
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.1e-43 180.3 113 69.9
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.1e-43 180.3 114 73.7
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 2.4e-43 179.1 111 73.9
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 5.4e-43 177.9 117 76.9
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 5.4e-43 177.9 133 64.7
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.0e-41 173.7 99 75.8
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 1.0e-41 173.7 98 81.6
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.3e-41 173.3 99 75.8
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.7e-41 172.9 99 76.8
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 3.9e-41 171.8 110 70.0
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 6.6e-41 171.0 101 79.2
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.9e-40 169.5 104 75.0
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 3.3e-40 168.7 99 73.7
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 3.3e-40 168.7 115 71.3
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 1.6e-39 166.4 99 72.7
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 2.1e-39 166.0 109 70.6
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 2.4e-38 162.5 96 79.2
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 9.0e-38 160.6 118 65.3
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 2.6e-37 159.1 176 48.9
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 3.4e-37 158.7 98 73.5
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 6.4e-36 154.5 115 67.0
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 5.1e-33 144.8 112 58.9
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.1e-33 144.8 114 63.2
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 1.5e-32 143.3 113 54.9
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 3.7e-31 138.7 115 60.9
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 6.2e-31 137.9 111 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 5.8e-29 131.3 109 53.2
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 7.6e-29 131.0 84 70.2
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 1.1e-24 117.1 103 53.4
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-24 116.7 129 46.5
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 4.3e-24 115.2 82 75.6
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 9.6e-24 114.0 99 54.5
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.1e-22 109.0 84 64.3
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 5.3e-22 108.2 58 77.6
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 2.0e-21 106.3 55 90.9
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 2.6e-21 105.9 91 57.1
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 3.4e-21 105.5 59 74.6
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 2.2e-20 102.8 57 77.2
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 7.1e-19 97.8 113 47.8
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 1.2e-18 97.1 47 93.6
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 1.2e-18 97.1 96 49.0
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 1.0e-17 94.0 58 70.7
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 1.1e-16 90.5 154 37.7
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.9e-16 89.7 55 76.4
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 9.7e-16 87.4 52 80.8
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 1.2e-13 80.5 78 55.1
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 1.8e-09 66.6 99 35.4


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