Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.7e-49 199.1 175 100.0
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-35 152.1 181 77.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 5.0e-35 151.8 181 72.4
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-34 148.7 181 76.8
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 7.3e-34 147.9 177 68.4
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 2.1e-33 146.4 180 79.4
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 3.6e-33 145.6 180 68.9
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-32 142.9 98 77.6
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-32 142.9 98 77.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 6.4e-30 134.8 181 66.9
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-29 133.3 181 68.5
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-29 133.3 181 68.5
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 1.2e-28 130.6 169 79.3
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 6.0e-28 128.3 181 63.5
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 6.6e-27 124.8 78 80.8
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 3.1e-24 115.9 159 71.1
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 6.8e-24 114.8 169 74.6
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 1.2e-23 114.0 79 79.7
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 2.0e-23 113.2 159 71.7
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-23 111.7 73 76.7
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-21 106.7 91 69.2
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.4e-21 106.3 174 77.0
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-21 105.9 76 75.0
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 3.2e-21 105.9 159 68.6
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 1.2e-20 104.0 61 86.9
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 6.6e-19 98.2 90 63.3
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-17 94.0 61 82.0
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 2.1e-17 93.2 174 49.4
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-16 89.7 95 60.0
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 3.1e-16 89.4 61 77.0
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 3.1e-16 89.4 61 77.0
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-15 85.9 58 79.3
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 4.4e-15 85.5 91 57.1
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 4.4e-15 85.5 91 57.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-14 83.2 101 55.4
C03p85510 Brassica napus HOM05D004128 ORTHO05D013239 2.9e-14 82.8 40 100.0
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.7e-14 82.4 143 57.3
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-13 79.3 94 54.3
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 4.1e-13 79.0 55 76.4
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-13 79.0 55 76.4
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 7.1e-13 78.2 67 67.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-12 75.9 97 52.6
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.6e-12 75.5 45 82.2
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 6.0e-12 75.1 88 48.9
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 1.0e-11 74.3 67 64.2
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-11 73.6 83 51.8
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.7e-11 73.6 83 51.8
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 3.0e-11 72.8 96 49.0
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 3.0e-11 72.8 92 51.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.0e-11 72.8 83 51.8
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 3.9e-11 72.4 92 51.1
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 5.1e-11 72.0 78 52.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 5.1e-11 72.0 100 50.0
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 6.6e-11 71.6 88 51.1
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 8.6e-11 71.2 83 50.6
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 2.5e-10 69.7 92 50.0
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.3e-10 69.3 83 50.6
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 3.3e-10 69.3 83 50.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.3e-10 69.3 83 50.6
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 9.6e-10 67.8 88 55.7
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 1.2e-09 67.4 77 53.2
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-09 65.9 83 48.2
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 4.7e-09 65.5 83 48.2
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-08 64.3 97 48.5
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-08 64.3 97 48.5
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-08 64.3 97 48.5
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 1.4e-08 63.9 100 48.0
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.8e-08 63.5 87 50.6
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 2.4e-08 63.2 70 60.0
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 4.0e-08 62.4 83 50.6
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 4.0e-08 62.4 71 56.3
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 6.8e-08 61.6 94 40.4
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 8.9e-08 61.2 76 55.3
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-07 60.5 76 57.9
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-07 60.1 80 53.8
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 2.6e-07 59.7 85 51.8
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 3.4e-07 59.3 54 64.8
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-07 58.9 89 38.2
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 5.8e-07 58.5 66 54.5
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 7.6e-07 58.2 73 56.2
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 9.9e-07 57.8 72 56.9
BcaC04g22448 Brassica carinata HOM05D004128 ORTHO05D096019 2.2e-06 56.6 123 72.4
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-06 56.2 59 54.2
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-06 56.2 59 54.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-06 56.2 59 54.2
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-06 56.2 59 54.2
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 3.8e-06 55.8 88 50.0
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.8e-06 55.8 88 48.9
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 3.8e-06 55.8 72 55.6
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 4.9e-06 55.5 59 54.2
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 6.4e-06 55.1 83 38.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 8.4e-06 54.7 49 61.2


User provided reference genes

Program Settings