Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 1.3e-146 523.1 267 100.0
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 1.8e-145 519.2 267 99.3
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 1.5e-144 516.2 267 98.9
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 5.0e-143 511.1 267 98.1
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 2.6e-139 498.8 267 95.5
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 6.3e-130 467.6 255 92.5
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.1e-129 465.3 267 89.1
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 6.5e-127 457.6 255 91.0
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.8e-124 449.5 255 89.0
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.0e-119 433.7 251 88.0
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.3e-119 433.3 267 80.9
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 6.4e-106 387.9 201 97.5
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.3e-103 379.4 267 70.8
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 1.9e-102 376.3 267 70.4
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 3.6e-101 372.1 205 91.7
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 2.0e-99 366.3 262 69.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 4.4e-99 365.2 266 67.3
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.2e-98 362.8 267 66.7
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.9e-98 362.5 267 66.7
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 2.9e-98 362.5 262 67.6
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 8.3e-98 360.9 267 67.4
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 8.3e-98 360.9 267 66.3
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 8.3e-98 360.9 248 72.2
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 1.1e-97 360.5 259 68.3
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.4e-97 360.1 267 65.5
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 1.9e-97 359.8 267 67.8
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 2.4e-97 359.4 248 71.4
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 3.2e-97 359.0 267 66.3
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 3.2e-97 359.0 267 66.7
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 3.2e-97 359.0 248 72.6
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 5.4e-97 358.2 267 64.8
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 7.1e-97 357.8 248 73.0
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 9.2e-97 357.5 267 66.7
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 1.2e-96 357.1 259 68.0
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 2.1e-96 356.3 267 65.5
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 2.1e-96 356.3 262 66.4
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 2.7e-96 355.9 267 66.7
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 3.5e-96 355.5 269 66.9
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.6e-96 355.1 267 64.8
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.0e-96 354.8 254 69.7
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.0e-95 354.0 246 69.5
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.0e-95 354.0 259 67.6
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 1.3e-95 353.6 259 68.3
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 1.7e-95 353.2 262 66.4
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.7e-95 353.2 246 69.1
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.7e-95 353.2 247 68.8
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 3.0e-95 352.4 267 66.7
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 5.1e-95 351.7 259 68.0
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 6.6e-95 351.3 267 65.5
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 8.6e-95 350.9 304 59.9
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 8.6e-95 350.9 267 64.0
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.5e-94 350.1 267 64.4
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.9e-94 349.7 267 64.4
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 1.9e-94 349.7 254 68.1
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.3e-94 349.0 267 64.4
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 5.6e-94 348.2 267 62.9
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 5.6e-94 348.2 267 62.5
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 5.6e-94 348.2 267 64.4
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.6e-93 346.7 267 64.4
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 2.1e-93 346.3 251 66.5
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 4.7e-93 345.1 265 66.4
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 6.2e-93 344.7 243 70.0
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 8.1e-93 344.4 252 63.9
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 8.1e-93 344.4 245 66.9
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.1e-92 344.0 246 68.7
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.4e-92 343.6 269 66.2
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.3e-92 342.8 247 65.6
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 3.1e-92 342.4 246 67.5
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 4.0e-92 342.0 250 67.2
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.0e-92 342.0 252 65.9
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 4.0e-92 342.0 247 67.2
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 4.0e-92 342.0 255 66.7
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 5.2e-92 341.7 268 61.9
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 8.9e-92 340.9 246 65.9
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 8.9e-92 340.9 250 65.6
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.2e-91 340.5 267 61.8
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.2e-91 340.5 244 66.0
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.5e-91 340.1 253 65.6
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.5e-91 340.1 234 71.8
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 3.4e-91 339.0 256 63.7
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 3.4e-91 339.0 245 65.7
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 9.9e-91 337.4 246 67.5
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.3e-90 337.0 235 67.7
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 1.7e-90 336.7 243 67.1
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.7e-90 336.7 267 63.7
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 2.2e-90 336.3 267 61.8
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.9e-90 335.9 247 65.2
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 3.7e-90 335.5 282 61.3
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 1.1e-89 334.0 267 61.4
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 1.1e-89 334.0 280 59.3
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.9e-89 333.2 301 56.1
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 2.4e-89 332.8 234 70.9
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 2.4e-89 332.8 247 65.2
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.4e-89 332.8 253 67.2
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 3.2e-89 332.4 246 65.0
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 5.4e-89 331.6 260 62.3
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 7.1e-89 331.3 267 63.3
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 1.2e-88 330.5 246 66.7
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 2.7e-88 329.3 232 69.8
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 7.8e-88 327.8 234 68.4
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.0e-87 327.4 249 65.1
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 1.0e-87 327.4 249 65.1
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.7e-87 326.6 232 68.5
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.7e-87 326.6 275 59.6
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.3e-87 326.2 244 63.5
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 3.0e-87 325.9 228 69.7
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 3.0e-87 325.9 213 74.2
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.9e-87 325.5 254 63.0
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 3.9e-87 325.5 245 64.9
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 2.1e-85 319.7 249 63.9
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 4.7e-85 318.5 215 73.0
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 8.1e-85 317.8 247 61.9
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 8.1e-85 317.8 216 72.2
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.1e-84 317.4 249 63.1
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.8e-84 316.6 213 72.3
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.0e-84 315.5 263 60.5
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 5.2e-84 315.1 337 52.8
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 1.7e-82 310.1 267 59.9
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 2.2e-82 309.7 267 59.9
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.6e-80 303.5 213 69.0
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 7.8e-80 301.2 213 68.5
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 3.0e-79 299.3 250 59.2
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.1e-79 298.5 273 57.9
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 8.7e-79 297.7 239 59.4
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 2.1e-77 293.1 212 67.9
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 6.2e-77 291.6 276 58.0
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 6.9e-76 288.1 249 58.2
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 3.4e-75 285.8 247 57.5
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.9e-74 282.0 245 58.0
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.7e-72 276.2 243 57.2
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.0e-72 275.0 234 59.8
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 7.9e-72 274.6 255 54.5
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 2.3e-71 273.1 184 73.4
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 5.1e-71 271.9 250 56.0
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.9e-70 270.0 250 55.2
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.3e-70 268.9 196 68.9
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.6e-70 268.5 206 64.1
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 1.3e-69 267.3 243 55.1
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 2.8e-69 266.2 267 53.6
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.5e-67 260.4 234 56.4
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.4e-67 259.2 305 47.9
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.4e-65 253.8 180 67.2
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 2.4e-65 253.1 245 52.2
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 2.1e-61 240.0 252 48.4
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 1.2e-59 234.2 181 61.3
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 7.6e-59 231.5 247 50.6
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 4.9e-58 228.8 244 48.4
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.1e-56 223.4 147 74.8
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.2e-51 207.6 205 56.1
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 1.7e-50 203.8 234 45.7
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 2.5e-49 199.9 139 71.2
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.3e-47 194.1 187 55.1
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.2e-42 176.8 166 54.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.3e-39 166.8 122 66.4
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.8e-36 157.1 105 70.5
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 9.1e-36 154.8 148 56.1
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.9e-33 147.1 104 67.3
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.2e-33 146.0 100 69.0
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 7.2e-33 145.2 238 36.1
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 2.2e-26 123.6 84 70.2
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 2.3e-23 113.6 118 47.5
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 2.3e-23 113.6 118 47.5
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.8e-20 104.0 66 74.2
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 3.1e-20 103.2 82 59.8
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 6.5e-18 95.5 85 56.5
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 4.2e-17 92.8 159 38.4
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 7.2e-17 92.0 157 40.1
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 1.8e-15 87.4 99 45.5
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.5e-14 84.3 68 57.4
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 7.5e-14 82.0 66 57.6
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.4e-12 75.9 63 65.1
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 1.4e-07 61.2 122 37.7
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 9.8e-06 55.1 39 71.8


User provided reference genes

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