Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00804 Brassica carinata HOM05D001962 ORTHO05D021668 1.3e-57 226.1 108 100.0
BolC3t19778H Brassica oleracea HOM05D001962 ORTHO05D021668 4.2e-48 194.5 108 88.0
A03p52040 Brassica napus HOM05D001962 ORTHO05D021668 1.5e-42 176.0 109 79.8
A04p25730 Brassica napus HOM05D001962 ORTHO05D021668 2.5e-32 142.1 108 70.4
BcaC01g00054 Brassica carinata HOM05D000942 ORTHO05D016627 3.6e-31 138.3 66 98.5
BcaB05g24180 Brassica carinata HOM05D001962 ORTHO05D091321 1.2e-26 123.2 66 89.4
THA.LOC104817442 Tarenaya hassleriana HOM05D000494 ORTHO05D000556 7.2e-08 60.8 54 57.4
C04p30740 Brassica napus HOM05D000494 ORTHO05D000556 1.6e-07 59.7 54 61.1
BcaC02g10292 Brassica carinata HOM05D000494 ORTHO05D000556 3.6e-07 58.5 54 59.3
BolC4t24593H Brassica oleracea HOM05D000494 ORTHO05D000556 3.6e-07 58.5 54 59.3
Aa31LG1G28460 Aethionema arabicum HOM05D000494 ORTHO05D000556 6.1e-07 57.8 54 55.6
CARHR142540 Cardamine hirsuta HOM05D000494 ORTHO05D000556 1.0e-06 57.0 54 61.1
CARHR172590 Cardamine hirsuta HOM05D000494 ORTHO05D000556 1.0e-06 57.0 54 57.4
BcaC07g42741 Brassica carinata HOM05D000494 ORTHO05D000556 1.4e-06 56.6 54 59.3
A09p54290 Brassica napus HOM05D000494 ORTHO05D000556 1.4e-06 56.6 54 59.3
BraA09t40841Z Brassica rapa HOM05D000494 ORTHO05D000556 1.4e-06 56.6 54 59.3
Thhalv10006037m.g Eutrema salsugineum HOM05D000494 ORTHO05D000556 1.4e-06 56.6 54 59.3
Sp4g29130 Schrenkiella parvula HOM05D000494 ORTHO05D000556 1.4e-06 56.6 54 55.6
BolC8t51294H Brassica oleracea HOM05D000494 ORTHO05D000556 2.3e-06 55.8 54 57.4
BcaC07g40714 Brassica carinata HOM05D000494 ORTHO05D000556 3.0e-06 55.5 54 57.4
A04p00660 Brassica napus HOM05D000494 ORTHO05D000556 3.0e-06 55.5 54 57.4
C08p37170 Brassica napus HOM05D000494 ORTHO05D000556 3.0e-06 55.5 54 57.4
BraA04t15785Z Brassica rapa HOM05D000494 ORTHO05D000556 3.0e-06 55.5 54 57.4
Manes.05G011300 Manihot esculenta HOM05D000494 ORTHO05D000556 3.0e-06 55.5 58 51.7
Sp5g01120 Schrenkiella parvula HOM05D000494 ORTHO05D000556 5.2e-06 54.7 54 55.6
Carub.0005s2898 Capsella rubella HOM05D000494 ORTHO05D000556 8.8e-06 53.9 54 55.6


User provided reference genes

Program Settings