Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00635 Brassica carinata HOM05D030859 ORTHO05D000001 9.0e-75 283.5 142 100.0
BcaC06g34903 Brassica carinata HOM05D030859 ORTHO05D000001 2.6e-50 202.2 139 71.2
BcaB08g34655 Brassica carinata HOM05D030859 ORTHO05D000001 1.9e-48 196.1 135 72.6
BcaC09g48989 Brassica carinata HOM05D030859 ORTHO05D000001 5.5e-40 167.9 118 69.5
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 4.0e-22 108.6 128 41.4
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 4.8e-20 101.7 121 40.5
BolC6t35286H Brassica oleracea HOM05D000002 ORTHO05D000001 4.1e-19 98.6 121 38.8
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 3.5e-18 95.5 126 36.5
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-16 87.8 109 41.3
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-15 87.0 106 39.6
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.3e-14 82.8 105 38.1
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 2.3e-14 82.8 121 37.2
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-14 81.6 115 38.3
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 6.8e-14 81.3 117 37.6
Oeu022190.1 Olea europaea HOM05D000002 ORTHO05D000001 8.9e-14 80.9 115 38.3
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.0e-13 79.7 104 36.5
Oeu008172.1 Olea europaea HOM05D000002 ORTHO05D000001 2.0e-13 79.7 115 36.5
Oeu057465.1 Olea europaea HOM05D000002 ORTHO05D000001 2.0e-13 79.7 115 37.4
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.6e-13 79.3 116 36.2
Oeu011917.1 Olea europaea HOM05D000002 ORTHO05D000001 3.4e-13 79.0 121 34.7
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 3.4e-13 79.0 122 31.1
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-13 79.0 127 30.7
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 4.4e-13 78.6 115 35.7
Oeu053596.1 Olea europaea HOM05D000002 ORTHO05D000001 4.4e-13 78.6 112 37.5
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.4e-13 78.6 122 31.1
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.8e-13 77.4 102 38.2
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-12 77.0 111 36.0
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 2.8e-12 75.9 106 37.7
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-12 75.9 126 34.9
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.3e-12 74.3 125 32.8
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.4e-11 73.6 110 32.7
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.4e-11 73.6 95 34.7
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-11 73.6 102 37.3
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-11 73.6 125 32.8
SHI07546 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-11 73.6 106 32.1
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 1.8e-11 73.2 119 32.8
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 4.1e-11 72.0 102 36.3
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-11 72.0 106 30.2
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-11 71.6 113 36.3
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.4e-11 71.6 107 33.6
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 5.4e-11 71.6 114 28.9
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 7.0e-11 71.2 106 34.9
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 9.2e-11 70.9 107 35.5
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 9.2e-11 70.9 120 35.0
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-10 70.5 102 35.3
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-10 70.1 105 35.2
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-10 70.1 96 33.3
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-10 70.1 103 36.9
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.6e-10 70.1 121 31.4
QL04p082088 Quercus lobata HOM05D000002 ORTHO05D000001 3.5e-10 68.9 122 32.8
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-10 68.6 113 36.3
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 4.5e-10 68.6 113 34.5
C06p01570 Brassica napus HOM05D000002 ORTHO05D000001 5.9e-10 68.2 71 43.7
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.9e-10 68.2 92 35.9
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 1.0e-09 67.4 78 39.7
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.0 113 35.4
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 67.0 83 34.9
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.7e-09 66.6 120 28.3
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 2.3e-09 66.2 121 31.4
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.9e-09 65.9 113 31.9
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 2.9e-09 65.9 113 33.6
COL.COLO4_29402 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.8e-09 65.5 77 37.7
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.8e-09 65.5 102 37.3
SHI14897 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-09 65.5 76 43.4
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.0e-09 65.1 120 27.5
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 5.0e-09 65.1 113 31.0
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.6e-09 64.7 106 35.8
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 6.6e-09 64.7 104 34.6
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-09 64.7 73 41.1
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-09 64.7 79 36.7
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-09 64.3 108 32.4
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-08 63.9 104 34.6
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-08 63.5 106 34.9
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-08 63.2 100 35.0
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-08 63.2 104 33.7
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 1.9e-08 63.2 121 30.6
Eucgr.F03845 Eucalyptus grandis HOM05D000053 ORTHO05D000035 2.5e-08 62.8 102 29.4
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-08 62.8 104 30.8
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 62.8 110 29.1
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-08 62.8 124 29.0
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 2.5e-08 62.8 109 33.9
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 2.5e-08 62.8 120 32.5
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-08 62.4 106 34.0
PSO135G0295 Papaver somniferum HOM05D000002 ORTHO05D000001 3.3e-08 62.4 87 41.4
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 3.3e-08 62.4 111 29.7
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 3.3e-08 62.4 121 30.6
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 4.3e-08 62.0 102 33.3
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 4.3e-08 62.0 102 37.3
Hma1.2p1_0354F.1_g133710 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 4.3e-08 62.0 92 35.9
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 5.6e-08 61.6 106 30.2
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 7.3e-08 61.2 115 31.3
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 7.3e-08 61.2 75 41.3
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-08 60.8 127 31.5
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 9.5e-08 60.8 77 33.8
Atru.chr2.1090 Acer truncatum HOM05D000034 ORTHO05D000001 1.6e-07 60.1 105 33.3
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 60.1 127 31.5
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-07 60.1 106 29.2
Oeu060318.1 Olea europaea HOM05D000002 ORTHO05D000001 1.6e-07 60.1 81 35.8
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 1.6e-07 60.1 115 30.4
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-07 60.1 115 30.4
Hma1.2p1_0006F.1_g004720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-07 59.7 98 32.7
Sed0021821 Sechium edule HOM05D000002 ORTHO05D000001 2.1e-07 59.7 107 29.9
ECA238G4167 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-07 59.3 109 33.9
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 3.6e-07 58.9 66 43.9
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-07 58.5 98 32.7
Hma1.2p1_0021F.1_g014420 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 4.7e-07 58.5 90 32.2
Oeu051830.1 Olea europaea HOM05D000002 ORTHO05D000001 4.7e-07 58.5 84 35.7
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 6.1e-07 58.2 113 30.1
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 6.1e-07 58.2 119 31.1
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 6.1e-07 58.2 117 28.2
SHI35638 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-07 58.2 63 42.9
Atru.chr2.1455 Acer truncatum HOM05D000002 ORTHO05D000001 8.0e-07 57.8 118 31.4
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-07 57.8 98 33.7
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-07 57.8 98 33.7
HanXRQChr03g0070601 Helianthus annuus HOM05D000002 ORTHO05D000001 8.0e-07 57.8 113 31.0
Hma1.2p1_0242F.1_g100810 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 8.0e-07 57.8 114 28.9
Hma1.2p1_0700F.1_g205820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-07 57.8 106 28.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 1.0e-06 57.4 114 28.1
Hma1.2p1_2459F.1_g322540 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 1.4e-06 57.0 96 33.3
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 1.4e-06 57.0 68 41.2
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.0 56 46.4
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 56.6 127 30.7
FvH4_5g03532 Fragaria vesca HOM05D000002 ORTHO05D000001 2.3e-06 56.2 104 28.8
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 2.3e-06 56.2 71 42.3
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-06 55.8 116 31.9
PSO017G4051 Papaver somniferum HOM05D000002 ORTHO05D000001 4.0e-06 55.5 73 38.4
COL.COLO4_29142 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.2e-06 55.1 81 37.0
Sabra16G0137700 Salix brachista HOM05D000002 ORTHO05D000001 5.2e-06 55.1 77 37.7
SHI16766 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 55.1 63 39.7
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.8e-06 54.7 82 29.3
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.8e-06 54.7 103 32.0
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 8.9e-06 54.3 112 27.7
Psat1g047720 Pisum sativum HOM05D000002 ORTHO05D000001 8.9e-06 54.3 122 26.2
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 8.9e-06 54.3 114 27.2
SHI11018 Sapria himalayana HOM05D004993 ORTHO05D000001 8.9e-06 54.3 90 35.6


User provided reference genes

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