Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00570 Brassica carinata HOM05D000209 ORTHO05D014056 8.9e-50 199.9 97 100.0
BolC3t20418H Brassica oleracea HOM05D000209 ORTHO05D014056 8.9e-50 199.9 97 100.0
A08p13990 Brassica napus HOM05D000209 ORTHO05D014056 6.6e-45 183.7 97 92.8
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 6.6e-45 183.7 97 92.8
CARHR260790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.7e-13 77.4 91 51.6
AL3G25680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-12 74.7 77 51.9
AL1G40170 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-11 73.2 94 53.2
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-11 72.8 94 52.1
AL3G33370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.3e-11 70.9 82 53.7
CARHR260760 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.3e-11 70.9 89 50.6
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-10 69.7 102 48.0
Thhalv10009753m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.4e-10 69.7 92 51.1
AL2G23050 Arabidopsis lyrata HOM05D000209 ORTHO05D014056 1.8e-10 69.3 80 51.2
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.8e-10 69.3 93 48.4
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 94 50.0
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 94 50.0
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 94 50.0
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 94 50.0
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 94 50.0
Carub.0008s1500 Capsella rubella HOM05D000209 ORTHO05D000129 4.1e-10 68.2 92 47.8
Carub.0005s2337 Capsella rubella HOM05D000209 ORTHO05D000129 6.9e-10 67.4 92 47.8
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.0e-10 67.0 97 47.4
AL3G27510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-09 66.2 86 47.7
BcaB06g28930 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-09 66.2 76 52.6
AL1G40160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-09 65.1 93 47.3
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-09 65.1 94 48.9
AL7G39300 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-09 65.1 79 46.8
AL1G39630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-09 64.3 88 46.6
AT3G20030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 73 47.9
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.3e-08 63.2 88 50.0
BcaB06g28931 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-08 63.2 77 48.1
BolC4t28014H Brassica oleracea HOM05D000209 ORTHO05D000129 1.7e-08 62.8 92 45.7
CARHR088870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 62.8 75 46.7
Thhalv10000447m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.7e-08 62.8 74 52.7
Carub.0001s2538 Capsella rubella HOM05D000209 ORTHO05D000129 2.2e-08 62.4 99 43.4
CARHR223800 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.2e-08 62.4 95 41.1
AL3G29750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-08 62.0 85 44.7
A04p28060 Brassica napus HOM05D000209 ORTHO05D000129 2.9e-08 62.0 92 45.7
CARHR025790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.0e-08 61.2 92 47.8
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 6.5e-08 60.8 70 51.4
C04p65350 Brassica napus HOM05D000209 ORTHO05D000129 8.5e-08 60.5 80 45.0
CARHR088590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.5e-08 60.5 80 46.2
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.5e-08 60.5 57 56.1
AL1G40180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-07 60.1 88 48.9
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-07 60.1 89 49.4
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-07 60.1 68 54.4
A09p46300 Brassica napus HOM05D000209 ORTHO05D014056 1.1e-07 60.1 86 39.5
A04p27850 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-07 59.3 80 43.8
C03p50600 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-07 59.3 87 40.2
BolC3t17349H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-07 59.3 87 40.2
Carub.0001s2537 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-07 59.3 103 42.7
Carub.0003s1337 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-07 59.3 78 44.9
Thhalv10023095m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-07 59.3 68 47.1
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-07 58.9 81 50.6
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-07 58.9 71 47.9
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-07 58.9 87 49.4
Carub.0003s1978 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-07 58.9 79 49.4
CARHR088850 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.5e-07 58.9 78 48.7
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.5e-07 58.9 92 43.5
AL5G29320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.2e-07 58.5 70 52.9
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.2e-07 58.5 81 48.1
BcaC06g34070 Brassica carinata HOM05D000209 ORTHO05D000129 3.2e-07 58.5 71 52.1
A01p10800 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-07 58.5 81 43.2
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-07 58.5 81 40.7
AL2G18650 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.2e-07 58.2 90 47.8
AL3G33440 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-07 57.8 90 43.3
AT3G20710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.5e-07 57.8 64 46.9
BcaC03g15722 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-07 57.8 103 43.7
C02p34380 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-07 57.8 103 43.7
BolC2t09468H Brassica oleracea HOM05D000209 ORTHO05D000129 5.5e-07 57.8 103 43.7
BolC5t32735H Brassica oleracea HOM05D013566 ORTHO05D014975 5.5e-07 57.8 80 48.8
BraA04t18277Z Brassica rapa HOM05D000209 ORTHO05D000129 5.5e-07 57.8 80 42.5
Carub.0003s1653 Capsella rubella HOM05D000209 ORTHO05D000129 5.5e-07 57.8 70 40.0
Carub.0003s2561 Capsella rubella HOM05D000209 ORTHO05D000129 5.5e-07 57.8 87 43.7
CARHR095400 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.5e-07 57.8 76 46.1
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.5e-07 57.8 82 43.9
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.2e-07 57.4 81 39.5
BcaB05g25213 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-07 57.4 79 50.6
BcaC01g03599 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-07 57.4 81 39.5
A03p41890 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 80 41.2
C04p65340 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 72 50.0
BolC3t17361H Brassica oleracea HOM05D000209 ORTHO05D000129 7.2e-07 57.4 81 39.5
BraA03t13343Z Brassica rapa HOM05D000209 ORTHO05D000129 7.2e-07 57.4 80 41.2
BraA04t18276Z Brassica rapa HOM05D000209 ORTHO05D000129 7.2e-07 57.4 72 50.0
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 7.2e-07 57.4 77 48.1
Carub.0003s1295 Capsella rubella HOM05D000209 ORTHO05D000129 7.2e-07 57.4 78 50.0
AL3G25970 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.3e-07 57.0 78 47.4
AT3G19890 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.3e-07 57.0 84 44.0
BcaC02g07611 Brassica carinata HOM05D000209 ORTHO05D000129 9.3e-07 57.0 80 43.8
BcaC09g48938 Brassica carinata HOM05D000209 ORTHO05D000129 9.3e-07 57.0 91 38.5
C01p44310 Brassica napus HOM05D000209 ORTHO05D000129 9.3e-07 57.0 91 38.5
BolC1t04392H Brassica oleracea HOM05D000209 ORTHO05D000129 9.3e-07 57.0 91 38.5
BraA03t13297Z Brassica rapa HOM05D000209 ORTHO05D000129 9.3e-07 57.0 81 39.5
Carub.0003s1995 Capsella rubella HOM05D000209 ORTHO05D000129 9.3e-07 57.0 81 43.2
Thhalv10023848m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.3e-07 57.0 84 44.0
Carub.0003s1977 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-06 56.6 74 43.2
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-06 56.2 68 51.5
C04p21200 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-06 56.2 74 40.5
C04p65320 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-06 56.2 78 42.3
BraA04t18274Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-06 56.2 78 42.3
CARHR092940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-06 56.2 88 39.8
CARHR158520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-06 56.2 83 43.4
AL3G25690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 86 44.2
AL3G30730 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 77 42.9
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 73 42.5
BcaB01g00294 Brassica carinata HOM05D000209 ORTHO05D014056 2.1e-06 55.8 79 39.2
Carub.0003s2043 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-06 55.8 87 40.2
CARHR094260 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-06 55.8 77 44.2
CARHR095410 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-06 55.8 80 45.0
Sp4g04370 Schrenkiella parvula HOM05D000209 ORTHO05D000129 2.1e-06 55.8 70 50.0
AL3G30470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 85 38.8
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 2.7e-06 55.5 87 47.1
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 78 44.9
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.6e-06 55.1 91 40.7
BcaC01g03775 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 74 43.2
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 3.6e-06 55.1 88 46.6
AT3G19880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-06 54.7 72 48.6
CARHR158510 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.6e-06 54.7 72 47.2
Thhalv10020932m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.6e-06 54.7 74 45.9
AT1G54550 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.1e-06 54.3 81 46.9
BcaB06g28955 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-06 54.3 75 41.3
BraA07t31068Z Brassica rapa HOM05D000209 ORTHO05D000129 6.1e-06 54.3 86 40.7
AL3G34120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.9e-06 53.9 66 48.5
AL3G53140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.9e-06 53.9 72 41.7
C06p42890 Brassica napus HOM05D000209 ORTHO05D000129 7.9e-06 53.9 90 43.3
Thhalv10003097m.g Eutrema salsugineum HOM05D000209 ORTHO05D014056 7.9e-06 53.9 72 45.8
Thhalv10022067m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.9e-06 53.9 79 41.8


User provided reference genes

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