Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 6.4e-310 1066.6 554 100.0
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 3.4e-287 991.1 569 92.1
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 2.4e-285 984.9 569 92.3
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 2.5e-274 948.3 531 94.9
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 4.3e-266 921.0 569 87.2
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 1.5e-263 912.5 570 84.0
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 1.1e-261 906.4 571 84.2
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 1.1e-261 906.4 569 84.0
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 4.6e-260 901.0 571 83.4
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 1.8e-259 899.0 571 83.2
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 1.8e-259 899.0 571 83.2
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 3.9e-259 897.9 571 84.2
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 2.5e-258 895.2 569 83.5
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 5.0e-254 880.9 570 79.8
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 1.8e-248 862.4 570 80.2
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 3.1e-248 861.7 569 80.5
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 1.1e-242 843.2 565 78.2
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 1.1e-237 826.6 565 77.5
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 1.4e-235 819.7 577 76.1
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 1.3e-233 813.1 565 77.3
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 6.3e-233 810.8 565 77.5
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 1.4e-232 809.7 565 76.8
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 2.0e-231 805.8 565 76.8
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 2.9e-222 775.4 565 74.5
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 3.8e-222 775.0 573 72.1
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 9.2e-216 753.8 384 100.0
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 1.2e-199 700.3 405 87.9
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 3.3e-197 692.2 560 67.0
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 2.3e-195 686.0 564 63.3
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 5.2e-195 684.9 565 64.8
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 5.2e-195 684.9 562 63.9
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 7.5e-194 681.0 562 64.2
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 2.9e-193 679.1 564 63.8
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 3.7e-193 678.7 564 63.7
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 1.9e-192 676.4 563 63.8
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 4.1e-192 675.2 564 64.0
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 2.7e-191 672.5 560 64.1
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 3.5e-191 672.2 564 62.8
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 5.1e-190 668.3 563 63.2
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 3.6e-188 662.1 576 61.1
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 6.2e-188 661.4 564 63.8
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.5e-186 656.8 563 62.3
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 1.9e-184 649.8 564 61.5
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 7.1e-184 647.9 570 61.6
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 7.1e-184 647.9 563 60.6
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 2.7e-183 646.0 559 60.3
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 6.0e-183 644.8 563 61.1
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 1.0e-182 644.0 564 59.8
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 1.0e-182 644.0 573 59.9
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 8.7e-182 641.0 582 59.5
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 1.5e-181 640.2 563 61.8
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.9e-181 639.8 564 62.8
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 3.3e-181 639.0 573 61.4
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 9.6e-181 637.5 565 61.9
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.2e-180 637.1 565 60.7
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 1.6e-180 636.7 562 59.6
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 2.8e-180 636.0 561 62.6
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 2.8e-180 636.0 568 60.4
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 8.1e-180 634.4 574 59.9
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.4e-179 633.6 566 61.7
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 1.8e-179 633.3 578 60.6
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 3.4e-178 629.0 563 61.5
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 9.9e-178 627.5 579 59.1
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.7e-177 626.7 567 59.3
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 2.2e-177 626.3 569 59.2
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.8e-177 625.5 567 59.1
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 6.4e-177 624.8 569 59.1
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 7.1e-176 621.3 566 58.0
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.2e-175 620.5 561 60.4
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.2e-175 620.5 561 60.4
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 8.7e-174 614.4 561 59.9
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 3.3e-173 612.5 566 57.8
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 4.3e-173 612.1 566 60.1
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 4.3e-173 612.1 567 61.0
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 5.6e-173 611.7 563 57.7
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 1.3e-172 610.5 578 59.2
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 3.6e-172 609.0 572 58.4
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 6.2e-172 608.2 561 58.3
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 1.8e-171 606.7 566 58.8
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 1.8e-171 606.7 510 62.4
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 3.1e-171 605.9 562 61.6
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 2.6e-170 602.8 566 58.7
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.4e-170 602.4 497 62.8
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 9.9e-170 600.9 570 59.5
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 4.9e-169 598.6 563 58.8
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 5.4e-168 595.1 572 58.4
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 1.2e-167 594.0 562 56.4
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 1.5e-165 587.0 561 58.6
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 1.3e-164 583.9 569 56.6
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 2.1e-164 583.2 560 57.7
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.8e-164 582.8 566 56.7
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 8.1e-164 581.3 396 71.2
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 1.1e-163 580.9 570 56.0
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 3.1e-163 579.3 561 57.9
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 5.3e-163 578.6 593 54.3
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 9.0e-163 577.8 433 67.9
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 1.2e-162 577.4 569 56.4
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 1.5e-162 577.0 562 56.2
AT4G18540 Arabidopsis thaliana HOM05D004704 ORTHO05D005384 3.4e-162 575.9 472 68.6
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 4.5e-162 575.5 571 55.2
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 1.3e-161 573.9 566 56.4
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 3.2e-160 569.3 562 55.3
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.8e-158 563.5 445 63.8
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 7.4e-157 558.1 566 53.2
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 3.7e-156 555.8 560 56.4
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 1.3e-153 547.4 579 54.2
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 1.4e-152 543.9 438 64.2
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 3.2e-152 542.7 571 54.6
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 3.5e-151 539.3 571 54.5
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 1.1e-149 534.3 443 61.6
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 9.7e-149 531.2 564 54.4
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 4.5e-146 522.3 551 53.5
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 1.3e-145 520.8 580 52.4
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 1.7e-145 520.4 339 73.2
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 2.9e-145 519.6 573 52.2
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 5.1e-142 508.8 574 53.7
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 4.3e-141 505.8 588 49.0
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 3.7e-140 502.7 564 51.8
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 2.6e-138 496.5 553 51.5
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 6.5e-137 491.9 561 51.0
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 2.1e-135 486.9 508 51.8
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 1.5e-130 470.7 302 74.2
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.3e-125 453.0 556 50.4
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 7.4e-125 451.8 563 49.6
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 2.5e-120 436.8 555 49.2
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 6.3e-116 422.2 444 47.7
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 2.2e-92 344.0 378 46.6
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 3.9e-89 333.2 395 50.1
Solyc02g032600.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 7.5e-85 318.9 370 50.3
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 1.6e-82 311.2 199 73.4
Duzib235G1356 Durio zibethinus HOM05D004704 ORTHO05D005384 4.7e-79 299.7 323 57.0
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 2.4e-75 287.3 505 39.8
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 5.1e-73 279.6 211 62.1
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 6.6e-73 279.3 359 45.4
TAR627G0576 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.4e-62 244.2 266 51.1
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 4.4e-61 240.0 156 73.1
SGA_v2.0_scaffold1G00016 Striga asiatica HOM05D004704 ORTHO05D005384 1.4e-51 208.4 191 56.0
Lj1C1195T2 Lonicera japonica HOM05D004704 ORTHO05D005384 8.2e-39 166.0 277 43.3
SMO351G0588 Selaginella moellendorffii HOM05D020388 ORTHO05D005384 3.5e-34 150.6 435 26.9
Sabra11G0046000 Salix brachista HOM05D004704 ORTHO05D005384 4.3e-32 143.7 218 47.7
arahy.Tifrunner.gnm1.ann1.EBKJ9L Arachis hypogaea HOM05D004704 ORTHO05D005384 7.7e-29 132.9 92 66.3
arahy.Tifrunner.gnm1.ann1.UG6603 Arachis hypogaea HOM05D004704 ORTHO05D005384 1.0e-28 132.5 93 65.6
SalBow2G1262 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.3e-25 121.3 193 44.0
SEGI_01061 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 2.5e-24 117.9 281 33.8
Cfa023998 Carpinus fangiana HOM05D004704 ORTHO05D005384 5.5e-19 100.1 181 30.4
COL.COLO4_31332 Corchorus olitorius HOM05D004704 ORTHO05D005384 9.4e-19 99.4 79 60.8
Nitab4.5_0008860g0010 Nicotiana tabacum HOM05D004704 ORTHO05D005384 2.1e-18 98.2 145 46.9
Rhsim06G0194600 Rhododendron simsii HOM05D000067 ORTHO05D005384 4.7e-18 97.1 116 45.7
arahy.Tifrunner.gnm1.ann1.96JZXU Arachis hypogaea HOM05D004704 ORTHO05D005384 1.1e-16 92.4 71 60.6
arahy.Tifrunner.gnm1.ann1.E2ZA7R Arachis hypogaea HOM05D004704 ORTHO05D005384 1.5e-16 92.0 70 61.4
arahy.Tifrunner.gnm1.ann1.ESA3XA Arachis hypogaea HOM05D004704 ORTHO05D005384 1.5e-16 92.0 51 84.3
arahy.Tifrunner.gnm1.ann1.V1RFD3 Arachis hypogaea HOM05D004704 ORTHO05D005384 2.2e-15 88.2 71 57.7
Rhsim06G0194700 Rhododendron simsii HOM05D000067 ORTHO05D000097 3.5e-13 80.9 74 55.4
Nitab4.5_0008860g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 1.2e-10 72.4 88 48.9
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 4.8e-07 60.5 50 56.0


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