Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00542 Brassica carinata HOM05D009347 ORTHO05D011534 1.3e-35 152.5 80 100.0
BolC3t20390H Brassica oleracea HOM05D009347 ORTHO05D011534 1.3e-35 152.5 80 100.0
C03p81240 Brassica napus HOM05D009347 ORTHO05D011534 3.9e-35 151.0 80 98.8
A08p13830 Brassica napus HOM05D009347 ORTHO05D011534 2.8e-33 144.8 80 96.2
BraA08t33362Z Brassica rapa HOM05D009347 ORTHO05D011534 6.3e-33 143.7 80 95.0
AL7G35770 Arabidopsis lyrata HOM05D009347 ORTHO05D011534 6.3e-25 117.1 80 81.2
Carub.0007s2272 Capsella rubella HOM05D009347 ORTHO05D011534 5.9e-23 110.5 80 75.0
CARHR225360 Cardamine hirsuta HOM05D009347 ORTHO05D011534 5.9e-23 110.5 80 76.2
AT4G18510 Arabidopsis thaliana HOM05D009347 ORTHO05D011534 1.4e-21 105.9 80 73.8
A03p51350 Brassica napus HOM05D009347 ORTHO05D011534 4.7e-20 100.9 80 73.8
BraA03t14217Z Brassica rapa HOM05D009347 ORTHO05D011534 4.7e-20 100.9 80 73.8
Thhalv10026712m.g Eutrema salsugineum HOM05D009347 ORTHO05D011534 4.7e-20 100.9 80 71.2
BcaNung02711 Brassica carinata HOM05D009347 ORTHO05D011534 2.3e-19 98.6 80 71.2
C07p49760 Brassica napus HOM05D009347 ORTHO05D011534 2.3e-19 98.6 80 71.2
BolC7t45477H Brassica oleracea HOM05D009347 ORTHO05D011534 2.3e-19 98.6 80 71.2
SpUn0467_0010 Schrenkiella parvula HOM05D009347 ORTHO05D011534 3.0e-19 98.2 80 71.2
SpUn0835_0010 Schrenkiella parvula HOM05D009347 ORTHO05D011534 3.0e-19 98.2 80 71.2
BcaC06g30579 Brassica carinata HOM05D009347 ORTHO05D011534 3.9e-19 97.8 80 71.2
BcaC06g30578 Brassica carinata HOM05D009347 ORTHO05D011534 6.7e-19 97.1 80 67.5
BcaC09g51496 Brassica carinata HOM05D009347 ORTHO05D011534 6.7e-19 97.1 80 66.2
BolC1t01220H Brassica oleracea HOM05D009347 ORTHO05D011534 6.7e-19 97.1 80 66.2
BcaNung03806 Brassica carinata HOM05D009347 ORTHO05D011534 8.8e-19 96.7 80 67.5
A01p10530 Brassica napus HOM05D009347 ORTHO05D011534 1.1e-18 96.3 80 67.5
BraA01t01000Z Brassica rapa HOM05D009347 ORTHO05D011534 4.4e-18 94.4 80 65.0
A03p51360 Brassica napus HOM05D009347 ORTHO05D011534 5.7e-18 94.0 80 65.0
C07p49770 Brassica napus HOM05D009347 ORTHO05D011534 5.7e-18 94.0 80 67.5
BraA03t14218Z Brassica rapa HOM05D009347 ORTHO05D011534 5.7e-18 94.0 80 65.0
BolC7t45478H Brassica oleracea HOM05D009347 ORTHO05D011534 7.4e-18 93.6 80 67.5
C01p12470 Brassica napus HOM05D009347 ORTHO05D011534 1.3e-17 92.8 80 65.0
BcaNung02714 Brassica carinata HOM05D009347 ORTHO05D011534 1.7e-17 92.4 80 67.5
BcaB04g18479 Brassica carinata HOM05D009347 ORTHO05D090565 4.2e-13 77.8 48 83.3


User provided reference genes

Program Settings