Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00480 Brassica carinata HOM05D008938 ORTHO05D011105 4.8e-55 217.6 112 100.0
C03p80380 Brassica napus HOM05D008938 ORTHO05D011105 4.8e-55 217.6 112 100.0
BolC3t20286H Brassica oleracea HOM05D008938 ORTHO05D011105 4.8e-55 217.6 112 100.0
BcaB03g12401 Brassica carinata HOM05D008938 ORTHO05D011105 3.3e-40 168.3 113 79.6
BraA08t34154Z Brassica rapa HOM05D008938 ORTHO05D011105 2.4e-38 162.2 112 77.7
Thhalv10027272m.g Eutrema salsugineum HOM05D008938 ORTHO05D011105 9.1e-38 160.2 117 74.4
BcaNung04239 Brassica carinata HOM05D008938 ORTHO05D011105 1.5e-37 159.5 115 73.9
CARHR231250 Cardamine hirsuta HOM05D008938 ORTHO05D011105 2.6e-37 158.7 117 71.8
A08p22030 Brassica napus HOM05D008938 ORTHO05D011105 1.7e-36 156.0 86 93.0
BcaNung04084 Brassica carinata HOM05D008938 ORTHO05D011105 1.9e-35 152.5 115 72.2
C07p53160 Brassica napus HOM05D008938 ORTHO05D011105 5.5e-35 151.0 115 71.3
BcaC09g50937 Brassica carinata HOM05D008938 ORTHO05D011105 1.2e-34 149.8 118 72.0
A01p15170 Brassica napus HOM05D008938 ORTHO05D011105 1.2e-34 149.8 118 72.0
C01p19100 Brassica napus HOM05D008938 ORTHO05D011105 1.2e-34 149.8 118 72.0
BraA01t01455Z Brassica rapa HOM05D008938 ORTHO05D011105 1.2e-34 149.8 118 72.0
A03p54800 Brassica napus HOM05D008938 ORTHO05D011105 2.1e-34 149.1 115 70.4
BraA03t14547Z Brassica rapa HOM05D008938 ORTHO05D011105 2.1e-34 149.1 115 70.4
BolC7t45812H Brassica oleracea HOM05D008938 ORTHO05D011105 3.6e-34 148.3 115 70.4
BcaNung01093 Brassica carinata HOM05D008938 ORTHO05D011105 4.7e-34 147.9 118 71.2
BolC1t01836H Brassica oleracea HOM05D008938 ORTHO05D011105 6.1e-34 147.5 118 71.2
AT4G23870 Arabidopsis thaliana HOM05D008938 ORTHO05D011105 1.4e-33 146.4 117 68.4
AL7G29490 Arabidopsis lyrata HOM05D008938 ORTHO05D011105 2.3e-33 145.6 117 68.4
Sp7g21820 Schrenkiella parvula HOM05D008938 ORTHO05D011105 3.0e-33 145.2 118 68.6
Carub.0007s1726 Capsella rubella HOM05D008938 ORTHO05D011105 3.3e-32 141.7 118 67.8
Aa31LG6G7080 Aethionema arabicum HOM05D008938 ORTHO05D011105 2.9e-28 128.6 115 63.5
Thhalv10029078m.g Eutrema salsugineum HOM05D008938 ORTHO05D011105 1.7e-23 112.8 118 58.5
Carub.0006s2978 Capsella rubella HOM05D008938 ORTHO05D011105 1.1e-22 110.2 117 56.4
AT4G11020 Arabidopsis thaliana HOM05D008938 ORTHO05D011105 5.3e-22 107.8 117 55.6
A02p26410 Brassica napus HOM05D008938 ORTHO05D011105 5.9e-21 104.4 117 54.7
BraA02t07643Z Brassica rapa HOM05D008938 ORTHO05D011105 5.9e-21 104.4 117 54.7
THA.LOC104815061 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 9.4e-19 97.1 110 50.9
CARHR255590 Cardamine hirsuta HOM05D008938 ORTHO05D011105 2.3e-17 92.4 100 54.0
THA.LOC104813365 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 3.0e-17 92.0 112 48.2
BolC2t10229H Brassica oleracea HOM05D008938 ORTHO05D011105 6.7e-17 90.9 117 48.7
BcaB05g23869 Brassica carinata HOM05D008938 ORTHO05D011105 8.8e-17 90.5 116 49.1
Sp6g06440 Schrenkiella parvula HOM05D008938 ORTHO05D011105 1.2e-16 90.1 119 51.3
BcaC03g16377 Brassica carinata HOM05D008938 ORTHO05D011105 3.3e-16 88.6 117 48.7
C02p41970 Brassica napus HOM05D008938 ORTHO05D011105 3.3e-16 88.6 117 48.7
THA.LOC104815067 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 9.1e-14 80.5 104 50.0


User provided reference genes

Program Settings