Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00423 Brassica carinata HOM05D000313 ORTHO05D017517 3.0e-54 214.9 108 100.0
C03p79590 Brassica napus HOM05D000313 ORTHO05D017517 1.1e-40 169.9 147 66.0
BcaC06g35946 Brassica carinata HOM05D000313 ORTHO05D017517 1.1e-37 159.8 96 83.3
C07p09440 Brassica napus HOM05D000313 ORTHO05D017517 3.9e-30 134.8 146 54.8
BolC7t41368H Brassica oleracea HOM05D000313 ORTHO05D017517 3.9e-30 134.8 146 54.8
C01p48340 Brassica napus HOM05D000313 ORTHO05D017517 2.4e-27 125.6 135 57.8
BraA04t16517Z Brassica rapa HOM05D000313 ORTHO05D017517 1.5e-18 96.3 139 43.2
BcaB06g28052 Brassica carinata HOM05D000313 ORTHO05D019939 3.9e-14 81.6 65 63.1
BcaB05g23567 Brassica carinata HOM05D000313 ORTHO05D019939 5.7e-13 77.8 65 63.1
BcaB07g32452 Brassica carinata HOM05D030602 ORTHO05D017517 5.7e-13 77.8 48 85.4
BcaB03g13813 Brassica carinata HOM05D030602 ORTHO05D000065 1.8e-11 72.8 47 78.7
BcaB07g30367 Brassica carinata HOM05D030602 ORTHO05D096109 1.8e-11 72.8 47 78.7
C03p84400 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-11 72.4 90 48.9
BcaB01g01342 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-11 70.9 56 58.9
BolC3t20210H Brassica oleracea HOM05D000313 ORTHO05D017517 2.6e-10 68.9 39 82.1
BcaC04g20706 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-10 68.2 62 56.5
C09p40090 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-10 68.2 62 56.5
BolC9t56903H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-10 68.2 62 56.5
BolC8t48958H Brassica oleracea HOM05D000313 ORTHO05D016071 2.2e-09 65.9 57 54.4
C03p80990 Brassica napus HOM05D000313 ORTHO05D016071 3.8e-09 65.1 54 55.6
C08p13260 Brassica napus HOM05D000313 ORTHO05D016071 3.8e-09 65.1 54 55.6
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-09 64.3 45 66.7
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-09 63.9 55 56.4
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-09 63.9 55 56.4
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 8.5e-09 63.9 55 56.4
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 62.8 53 56.6
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 62.8 53 56.6
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-08 62.0 55 54.5
C06p18280 Brassica napus HOM05D000313 ORTHO05D016071 3.2e-08 62.0 54 53.7
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-08 62.0 55 54.5
A02p29900 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-08 61.2 53 54.7
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-08 60.8 55 52.7
C04p23230 Brassica napus HOM05D000313 ORTHO05D016071 9.4e-08 60.5 57 52.6
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.1 44 59.1
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-07 60.1 44 59.1
BraA01t04093Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-07 60.1 44 59.1
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 59.7 41 65.9
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-07 58.5 45 60.0
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-07 58.5 45 60.0
C08p08670 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-07 58.2 45 60.0
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-07 57.8 67 44.8
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-07 57.8 68 47.1
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-07 57.4 40 57.5
C02p49520 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-07 57.4 67 47.8
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-06 57.0 66 48.5
BcaB03g16792 Brassica carinata HOM05D000313 ORTHO05D024461 1.4e-06 56.6 50 56.0
BcaNung02333 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 55.8 55 47.3
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 55.8 55 47.3
C07p05650 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 55.8 38 63.2
BolC7t40964H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 55.8 38 63.2
C01p05830 Brassica napus HOM05D000313 ORTHO05D016071 3.0e-06 55.5 56 50.0
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 56.4
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 56.4
C04p02900 Brassica napus HOM05D000313 ORTHO05D040407 4.0e-06 55.1 91 33.0
BolC4t21930H Brassica oleracea HOM05D000313 ORTHO05D040407 4.0e-06 55.1 91 33.0
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-06 55.1 48 56.2
BcaB01g03278 Brassica carinata HOM05D017000 ORTHO05D000065 5.2e-06 54.7 57 42.1
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-06 54.7 48 56.2
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-06 54.3 46 54.3
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-06 54.3 41 56.1
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-06 54.3 41 56.1
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-06 54.3 41 56.1
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 8.8e-06 53.9 86 46.5


User provided reference genes

Program Settings