Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 3.1e-50 201.4 98 100.0
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 3.1e-50 201.4 98 100.0
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 3.2e-47 191.4 103 92.2
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 2.7e-46 188.3 103 90.3
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 3.5e-46 188.0 103 90.3
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 4.6e-46 187.6 103 90.3
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 6.1e-46 187.2 103 90.3
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 1.5e-44 182.6 103 88.3
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 4.3e-44 181.0 103 87.4
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 1.1e-42 176.4 103 83.5
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 4.1e-42 174.5 103 82.5
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 2.7e-38 161.8 131 66.4
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 3.3e-36 154.8 99 77.8
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 9.7e-36 153.3 100 79.0
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.7e-35 152.5 99 75.8
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.4e-34 149.4 98 74.5
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 1.8e-34 149.1 98 69.4
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 1.8e-34 149.1 98 69.4
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.4e-34 148.7 98 69.4
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 3.1e-34 148.3 98 69.4
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 3.1e-34 148.3 103 69.9
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 3.1e-34 148.3 103 69.9
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 4.1e-34 147.9 103 70.9
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 6.9e-34 147.1 102 71.6
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 6.9e-34 147.1 98 69.4
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 9.1e-34 146.7 103 70.9
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 2.0e-33 145.6 103 68.9
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 3.4e-33 144.8 99 70.7
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 5.9e-33 144.1 99 72.7
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 5.9e-33 144.1 92 71.7
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 1.3e-32 142.9 97 73.2
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 1.3e-32 142.9 98 72.4
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 3.8e-32 141.4 97 72.2
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 5.0e-32 141.0 99 69.7
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 6.5e-32 140.6 99 69.7
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 8.5e-32 140.2 106 68.9
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.1e-31 139.8 99 70.7
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 1.4e-31 139.4 92 68.5
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.9e-31 139.0 99 69.7
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 2.5e-31 138.7 99 72.7
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 2.5e-31 138.7 99 69.7
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 5.5e-31 137.5 99 68.7
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 5.5e-31 137.5 98 68.4
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 5.5e-31 137.5 96 69.8
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 7.2e-31 137.1 99 69.7
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 7.2e-31 137.1 97 71.1
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 7.2e-31 137.1 92 68.5
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 7.2e-31 137.1 92 68.5
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 9.4e-31 136.7 99 69.7
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 9.4e-31 136.7 99 70.7
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 1.2e-30 136.3 99 69.7
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 1.2e-30 136.3 94 69.1
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 1.2e-30 136.3 102 68.6
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 1.6e-30 136.0 97 70.1
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 2.1e-30 135.6 69 100.0
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 2.1e-30 135.6 97 70.1
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 2.1e-30 135.6 90 71.1
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 2.1e-30 135.6 98 69.4
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 2.1e-30 135.6 99 66.7
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 2.1e-30 135.6 97 71.1
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 2.1e-30 135.6 97 69.1
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 2.7e-30 135.2 98 70.4
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 2.7e-30 135.2 91 69.2
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 3.6e-30 134.8 92 70.7
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 3.6e-30 134.8 99 67.7
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 3.6e-30 134.8 98 67.3
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 4.7e-30 134.4 98 66.3
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 6.1e-30 134.0 96 69.8
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 7.9e-30 133.7 99 68.7
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 2.3e-29 132.1 94 68.1
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 3.0e-29 131.7 106 63.2
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 3.0e-29 131.7 91 70.3
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 3.0e-29 131.7 98 66.3
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 5.1e-29 131.0 102 64.7
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.1e-28 129.8 97 66.0
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.1e-28 129.8 97 66.0
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 1.5e-28 129.4 96 66.7
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 2.0e-28 129.0 100 67.0
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 2.0e-28 129.0 100 69.0
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 2.6e-28 128.6 101 64.4
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 2.6e-28 128.6 90 70.0
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 2.6e-28 128.6 96 63.5
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 3.3e-28 128.3 96 66.7
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 4.4e-28 127.9 97 64.9
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 4.4e-28 127.9 101 66.3
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 5.7e-28 127.5 97 67.0
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 7.4e-28 127.1 79 86.1
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 7.4e-28 127.1 96 68.8
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.7e-27 125.9 97 64.9
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.7e-27 125.9 97 64.9
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 1.7e-27 125.9 100 68.0
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 2.8e-27 125.2 89 73.0
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 2.8e-27 125.2 99 66.7
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 3.7e-27 124.8 94 69.1
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 6.3e-27 124.0 106 66.0
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 6.3e-27 124.0 94 64.9
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 8.2e-27 123.6 92 66.3
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.1e-26 123.2 92 68.5
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 1.1e-26 123.2 89 70.8
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 1.1e-26 123.2 106 57.5
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 1.4e-26 122.9 101 64.4
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 1.4e-26 122.9 99 64.6
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.4e-26 122.1 97 63.9
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 2.4e-26 122.1 100 63.0
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 2.4e-26 122.1 100 63.0
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 4.1e-26 121.3 99 64.6
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 4.1e-26 121.3 83 69.9
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 4.1e-26 121.3 89 65.2
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 1.2e-25 119.8 101 61.4
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 1.2e-25 119.8 99 60.6
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 1.5e-25 119.4 89 67.4
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 4.5e-25 117.9 90 65.6
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 5.9e-25 117.5 72 73.6
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 7.7e-25 117.1 87 66.7
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 7.7e-25 117.1 89 62.9
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 1.7e-24 115.9 86 68.6
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 1.7e-24 115.9 99 62.6
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 1.7e-24 115.9 86 67.4
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 2.9e-24 115.2 100 59.0
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 6.5e-24 114.0 98 62.2
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 8.5e-24 113.6 77 68.8
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 7.2e-23 110.5 90 64.4
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 1.2e-22 109.8 99 62.6
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 6.1e-22 107.5 84 59.5
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 8.0e-22 107.1 82 68.3
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 1.0e-21 106.7 90 61.1
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 2.3e-21 105.5 88 60.2
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 2.0e-20 102.4 88 59.1
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 2.6e-20 102.1 90 60.0
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 3.3e-20 101.7 88 60.2
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 3.3e-20 101.7 86 61.6
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 1.2e-17 93.2 94 52.1
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 2.2e-16 89.0 50 76.0
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 8.5e-16 87.0 89 50.6
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 1.8e-13 79.3 64 64.1
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 2.3e-13 79.0 109 45.9
A01p01210 Brassica napus HOM05D004858 ORTHO05D005600 8.8e-13 77.0 59 72.9
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 5.7e-12 74.3 72 58.3
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 5.7e-12 74.3 74 59.5
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.7e-11 71.6 80 46.2
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 4.8e-11 71.2 91 42.9
Pp3c13_15160 Physcomitrium patens HOM05D004858 ORTHO05D005600 4.8e-11 71.2 70 48.6
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 6.3e-11 70.9 74 56.8
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 8.3e-11 70.5 67 61.2
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 5.4e-10 67.8 90 46.7
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 5.4e-10 67.8 75 53.3
SEGI_12659 Sequoiadendron giganteum HOM05D004858 ORTHO05D005600 2.2e-08 62.4 70 48.6
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 5.5e-07 57.8 60 46.7
MCO08G099 Micromonas commoda HOM05D004858 ORTHO05D005600 1.2e-06 56.6 93 36.6
PRCOL_00006369 Prasinoderma coloniale HOM05D004858 ORTHO05D005600 3.6e-06 55.1 80 36.2


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