Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 1.0e-85 320.1 172 100.0
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 6.8e-85 317.4 172 98.3
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 3.2e-82 308.5 172 96.5
A08p24420 Brassica napus HOM05D004577 ORTHO05D005062 2.1e-78 295.8 172 91.9
BraA08t34397Z Brassica rapa HOM05D004577 ORTHO05D005062 2.1e-78 295.8 172 91.9
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 1.5e-68 263.1 173 86.7
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 6.4e-59 231.1 175 79.4
Thhalv10008915m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 1.1e-55 220.3 176 76.1
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 1.8e-53 213.0 176 76.1
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 4.5e-52 208.4 174 73.6
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 4.5e-52 208.4 177 72.3
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 6.4e-51 204.5 179 70.9
CARHR029880 Cardamine hirsuta HOM05D004577 ORTHO05D005062 2.1e-49 199.5 175 66.9
BraA07t28780Z Brassica rapa HOM05D004577 ORTHO05D005062 7.4e-47 191.0 178 69.1
AL1G44500 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 2.4e-45 186.0 174 68.4
Carub.0001s2869 Capsella rubella HOM05D004577 ORTHO05D005062 7.6e-44 181.0 172 68.6
AT1G30475 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 2.1e-41 172.9 173 65.3
THA.LOC104798603 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 2.8e-30 136.0 170 56.5
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 2.2e-22 109.8 96 74.0
Gohir.D09G118900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 3.7e-22 109.0 99 70.7
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 3.7e-22 109.0 98 72.4
BraA05t20207Z Brassica rapa HOM05D004577 ORTHO05D005062 4.8e-22 108.6 104 67.3
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 6.3e-22 108.2 124 61.3
Thhalv10011850m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 1.4e-21 107.1 94 70.2
A05p12690 Brassica napus HOM05D004577 ORTHO05D005062 2.4e-21 106.3 104 66.3
C04p16620 Brassica napus HOM05D004577 ORTHO05D005062 2.4e-21 106.3 104 66.3
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 5.3e-21 105.1 94 66.0
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 5.3e-21 105.1 99 69.7
Gohir.A01G038700 Gossypium hirsutum HOM05D004577 ORTHO05D005062 5.3e-21 105.1 99 69.7
Aa31LG6G11730 Aethionema arabicum HOM05D004577 ORTHO05D005062 6.9e-21 104.8 168 50.6
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 6.9e-21 104.8 94 66.0
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 9.1e-21 104.4 107 62.6
BcaB02g10507 Brassica carinata HOM05D004577 ORTHO05D005062 1.2e-20 104.0 104 66.3
Sp1g41840 Schrenkiella parvula HOM05D004577 ORTHO05D005062 2.0e-20 103.2 108 61.1
THA.LOC104826365 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 3.4e-20 102.4 114 59.6
CARHR045970 Cardamine hirsuta HOM05D004577 ORTHO05D005062 4.5e-20 102.1 124 58.1
TWI38G1007 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 1.7e-19 100.1 102 67.6
MD03G1035300 Malus domestica HOM05D004577 ORTHO05D005062 5.5e-18 95.1 172 44.2
MD11G1037000 Malus domestica HOM05D004577 ORTHO05D005062 4.7e-17 92.0 148 50.0
Eucgr.E00269 Eucalyptus grandis HOM05D004577 ORTHO05D005062 1.0e-16 90.9 148 47.3
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 1.4e-16 90.5 91 64.8
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 1.4e-16 90.5 102 55.9
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 1.8e-16 90.1 135 51.9
unitig_578.g16418 Utricularia gibba HOM05D004577 ORTHO05D005062 1.8e-16 90.1 100 62.0
Peaxi162Scf00359g00123 Petunia axillaris HOM05D004577 ORTHO05D005062 3.0e-16 89.4 103 60.2
FvH4_3g42270 Fragaria vesca HOM05D004577 ORTHO05D005062 3.9e-16 89.0 114 59.6
Solyc08g006050.2 Solanum lycopersicum HOM05D004577 ORTHO05D005062 5.1e-16 88.6 102 57.8
Lsat_1_v5_gn_9_89100 Lactuca sativa HOM05D004577 ORTHO05D005062 8.8e-16 87.8 95 62.1
PGR004G1013 Punica granatum HOM05D004577 ORTHO05D005062 8.8e-16 87.8 98 61.2
FAN16G3679 Fragaria x ananassa HOM05D004577 ORTHO05D005062 1.1e-15 87.4 114 58.8
RcHm_v2.0_Chr5g0075591 Rosa chinensis HOM05D004577 ORTHO05D005062 1.1e-15 87.4 96 63.5
Solyc04g051850.3 Solanum lycopersicum HOM05D004577 ORTHO05D005062 1.1e-15 87.4 103 60.2
Sopen04g023180 Solanum pennellii HOM05D004577 ORTHO05D005062 1.5e-15 87.0 103 60.2
Dinv40884 Davidia involucrata HOM05D002691 ORTHO05D003304 2.0e-15 86.7 102 57.8
Prupe.6G028300 Prunus persica HOM05D004577 ORTHO05D005062 2.0e-15 86.7 94 64.9
HPP92_011618 Vanilla planifolia HOM05D004577 ORTHO05D005062 2.0e-15 86.7 152 45.4
PGSC0003DMG400016552 Solanum tuberosum HOM05D004577 ORTHO05D005062 2.6e-15 86.3 103 60.2
arahy.Tifrunner.gnm1.ann1.JWFX0I Arachis hypogaea HOM05D004577 ORTHO05D005062 4.4e-15 85.5 170 44.1
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 4.4e-15 85.5 103 60.2
DCAR_019165 Daucus carota HOM05D004577 ORTHO05D005062 5.7e-15 85.1 93 61.3
FAN21G3744 Fragaria x ananassa HOM05D004577 ORTHO05D005062 5.7e-15 85.1 96 62.5
FAN25G2651 Fragaria x ananassa HOM05D004577 ORTHO05D005062 5.7e-15 85.1 96 62.5
Ca_12454_v3 Cicer arietinum L. HOM05D004577 ORTHO05D005062 7.4e-15 84.7 103 55.3
TWI39G1131 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 7.4e-15 84.7 102 60.8
arahy.Tifrunner.gnm1.ann1.DGYJ7N Arachis hypogaea HOM05D004577 ORTHO05D005062 9.7e-15 84.3 170 44.1
Eucgr.K00372 Eucalyptus grandis HOM05D004577 ORTHO05D005062 9.7e-15 84.3 86 65.1
Gorai.002G035900 Gossypium raimondii HOM05D004577 ORTHO05D005062 9.7e-15 84.3 98 59.2
CSS0013049 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 1.3e-14 84.0 103 57.3
MELO3C014068.2 Cucumis melo HOM05D004577 ORTHO05D005062 1.3e-14 84.0 160 46.2
Cc10_g02580 Coffea canephora HOM05D004577 ORTHO05D005062 1.7e-14 83.6 103 56.3
Nitab4.5_0000904g0010 Nicotiana tabacum HOM05D004577 ORTHO05D005062 1.7e-14 83.6 104 58.7
ClCG10G004020 Citrullus lanatus HOM05D004577 ORTHO05D005062 2.2e-14 83.2 157 45.2
Gohir.A04G049900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 2.2e-14 83.2 86 54.7
unitig_8.g4693 Utricularia gibba HOM05D002703 ORTHO05D002921 4.8e-14 82.0 107 58.9
Migut.M01633 Erythranthe guttata HOM05D004577 ORTHO05D005062 6.3e-14 81.6 97 60.8
Nitab4.5_0005865g0040 Nicotiana tabacum HOM05D004577 ORTHO05D005062 6.3e-14 81.6 104 57.7
Psat5g166440 Pisum sativum HOM05D004577 ORTHO05D005062 6.3e-14 81.6 101 56.4
Potri.001G371500 Populus trichocarpa HOM05D004577 ORTHO05D005062 6.3e-14 81.6 139 47.5
MSTRG.14503 Avicennia marina HOM05D004577 ORTHO05D005062 8.2e-14 81.3 93 61.3
MSTRG.13031 Avicennia marina HOM05D004577 ORTHO05D005062 1.1e-13 80.9 93 61.3
DCAR_015198 Daucus carota HOM05D004577 ORTHO05D005062 1.1e-13 80.9 99 55.6
ClCG10G003880 Citrullus lanatus HOM05D004577 ORTHO05D005062 1.4e-13 80.5 136 47.1
ClCG10G004040 Citrullus lanatus HOM05D004577 ORTHO05D005062 1.4e-13 80.5 136 47.1
CsaV3_3G003860 Cucumis sativus L. HOM05D004577 ORTHO05D005062 1.4e-13 80.5 158 43.7
Migut.H01738 Erythranthe guttata HOM05D004577 ORTHO05D005062 1.4e-13 80.5 132 50.0
QL08p002692 Quercus lobata HOM05D004577 ORTHO05D005062 1.4e-13 80.5 139 46.8
Cfa021890 Carpinus fangiana HOM05D004577 ORTHO05D005062 1.8e-13 80.1 131 47.3
ECA240G1529 Erigeron canadensis HOM05D000491 ORTHO05D000359 1.8e-13 80.1 96 62.5
MBI15_g38535_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 1.8e-13 80.1 97 59.8
Sed0027009 Sechium edule HOM05D004577 ORTHO05D005062 1.8e-13 80.1 113 55.8
TAR627G0729 Trochodendron aralioides HOM05D004577 ORTHO05D005062 1.8e-13 80.1 97 57.7
CSS0030856 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.4e-13 79.7 107 52.3
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.4e-13 79.7 92 59.8
FAN11G1489 Fragaria x ananassa HOM05D004577 ORTHO05D005062 2.4e-13 79.7 114 57.0
Oeu021394.1 Olea europaea HOM05D004577 ORTHO05D005062 2.4e-13 79.7 85 62.4
SGA_v2.0_scaffold8G04425 Striga asiatica HOM05D004577 ORTHO05D005062 2.4e-13 79.7 94 61.7
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 3.1e-13 79.3 147 44.2
Medtr3g461020 Medicago truncatula HOM05D004577 ORTHO05D005062 4.1e-13 79.0 96 58.3
Atru.chr2.3835 Acer truncatum HOM05D004577 ORTHO05D005062 6.9e-13 78.2 175 44.0
CiPaw.12G140600 Carya illinoinensis HOM05D004577 ORTHO05D005062 6.9e-13 78.2 103 57.3
Nn1g08321 Nelumbo nucifera HOM05D004577 ORTHO05D005062 6.9e-13 78.2 96 56.2
Sc22g0002120 Simmondsia chinensis HOM05D004577 ORTHO05D005062 6.9e-13 78.2 92 62.0
CiPaw.11G206900 Carya illinoinensis HOM05D004577 ORTHO05D005062 9.1e-13 77.8 105 55.2
Glyma.18G074400 Glycine max HOM05D004577 ORTHO05D005062 9.1e-13 77.8 97 59.8
Phvul.006G059254 Phaseolus vulgaris HOM05D004577 ORTHO05D005062 9.1e-13 77.8 96 59.4
TAR629G1725 Trochodendron aralioides HOM05D004577 ORTHO05D005062 9.1e-13 77.8 103 53.4
VMungo0540G1151 Vigna mungo HOM05D004577 ORTHO05D005062 1.2e-12 77.4 96 59.4
Glyma.08G332600 Glycine max HOM05D004577 ORTHO05D005062 2.0e-12 76.6 121 50.4
Lalb_Chr16g0391221 Lupinus albus HOM05D004577 ORTHO05D005062 2.0e-12 76.6 98 55.1
CSS0050514 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.6e-12 76.3 81 64.2
HanXRQChr13g0408461 Helianthus annuus HOM05D004577 ORTHO05D005062 2.6e-12 76.3 93 62.4
Lj6g0018119 Lotus japonicus HOM05D004577 ORTHO05D005062 3.4e-12 75.9 94 59.6
Nitab4.5_0000329g0070 Nicotiana tabacum HOM05D004577 ORTHO05D005062 3.4e-12 75.9 113 54.0
GSVIVG01014742001 Vitis vinifera HOM05D004577 ORTHO05D005062 3.4e-12 75.9 59 66.1
ATR0681G062 Amborella trichopoda HOM05D004577 ORTHO05D005062 5.9e-12 75.1 139 42.4
MBI07_g28243_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 5.9e-12 75.1 96 50.0
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 5.9e-12 75.1 99 54.5
QL08p055193 Quercus lobata HOM05D004577 ORTHO05D005062 5.9e-12 75.1 135 46.7
HanXRQChr03g0080381 Helianthus annuus HOM05D004577 ORTHO05D005062 1.0e-11 74.3 93 60.2
PSO541G2111 Papaver somniferum HOM05D004577 ORTHO05D005062 1.0e-11 74.3 133 48.1
PSO675G7851 Papaver somniferum HOM05D004577 ORTHO05D005062 1.3e-11 73.9 133 48.1
Aqoxy5G01161 Aquilegia oxysepala HOM05D004577 ORTHO05D005062 5.0e-11 72.0 86 62.8
TPR.G17935 Trifolium pratense HOM05D004577 ORTHO05D005062 5.0e-11 72.0 97 49.5
HPP92_020499 Vanilla planifolia HOM05D004577 ORTHO05D005062 5.0e-11 72.0 97 58.8
Hma1.2p1_3473F.1_g336250 Hydrangea macrophylla HOM05D004577 ORTHO05D005062 8.5e-11 71.2 80 60.0
TPR.G2686 Trifolium pratense HOM05D011393 ORTHO05D013493 1.4e-10 70.5 100 55.0
unitig_0.g986 Utricularia gibba HOM05D004577 ORTHO05D005062 1.4e-10 70.5 152 40.1
CDE01G0461 Ceratophyllum demersum HOM05D004577 ORTHO05D005062 5.5e-10 68.6 84 58.3
Cfa001670 Carpinus fangiana HOM05D004577 ORTHO05D005062 7.2e-10 68.2 138 47.1
Manes.05G118000 Manihot esculenta HOM05D004577 ORTHO05D005062 7.2e-10 68.2 99 53.5
CANSAT11G1943 Cannabis sativa HOM05D004577 ORTHO05D005062 1.2e-09 67.4 131 42.7
Atru.chr1.1924 Acer truncatum HOM05D004577 ORTHO05D005062 1.6e-09 67.0 120 47.5
Haze_16864 Corylus avellana HOM05D004577 ORTHO05D005062 1.6e-09 67.0 111 53.2
CDE02G2114 Ceratophyllum demersum HOM05D000091 ORTHO05D002116 2.1e-09 66.6 100 51.0
Aa31LG10G50 Aethionema arabicum HOM05D004577 ORTHO05D005062 3.6e-09 65.9 56 73.2
EL10Ac7g17857 Beta vulgaris HOM05D004577 ORTHO05D005062 3.6e-09 65.9 93 58.1
Dinv26646 Davidia involucrata HOM05D004577 ORTHO05D005062 3.6e-09 65.9 83 55.4
SalBow1G5164 Salvia bowleyana HOM05D004577 ORTHO05D005062 3.6e-09 65.9 130 46.2
CiPaw.01G270900 Carya illinoinensis HOM05D004577 ORTHO05D005062 4.7e-09 65.5 139 43.2
Mapoly0031s0147 Marchantia polymorpha HOM05D034204 ORTHO05D005062 1.8e-08 63.5 144 39.6
Gorai.N025400 Gossypium raimondii HOM05D004577 ORTHO05D005062 3.0e-08 62.8 57 77.2
Hma1.2p1_0193F.1_g083910 Hydrangea macrophylla HOM05D004577 ORTHO05D005062 3.0e-08 62.8 81 58.0
Rhsim06G0184100 Rhododendron simsii HOM05D041616 ORTHO05D005062 3.9e-08 62.4 144 40.3
EL10Ac2g03806 Beta vulgaris HOM05D004577 ORTHO05D005062 5.2e-08 62.0 85 57.6
Lalb_Chr03g0040851 Lupinus albus HOM05D011393 ORTHO05D013493 6.7e-08 61.6 85 56.5
Phvul.007G239300 Phaseolus vulgaris HOM05D011393 ORTHO05D013493 8.8e-08 61.2 110 41.8
TPR.G38738 Trifolium pratense HOM05D011393 ORTHO05D013493 3.3e-07 59.3 101 48.5
Mapoly0050s0087 Marchantia polymorpha HOM05D034204 ORTHO05D005062 4.4e-07 58.9 98 46.9
Gorai.008G093100 Gossypium raimondii HOM05D004577 ORTHO05D005062 5.7e-07 58.5 57 73.7
arahy.Tifrunner.gnm1.ann1.8LZ2EL Arachis hypogaea HOM05D011393 ORTHO05D013493 7.4e-07 58.2 105 50.5
arahy.Tifrunner.gnm1.ann1.GG3KEQ Arachis hypogaea HOM05D011393 ORTHO05D013493 7.4e-07 58.2 105 50.5
Aa31LG10G60 Aethionema arabicum HOM05D004577 ORTHO05D005062 9.7e-07 57.8 74 50.0
Gorai.009G401800 Gossypium raimondii HOM05D004577 ORTHO05D005062 1.7e-06 57.0 56 60.7
Nitab4.5_0006854g0030 Nicotiana tabacum HOM05D004577 ORTHO05D005062 1.7e-06 57.0 58 56.9
vmacro12024 Vaccinium macrocarpon HOM05D041616 ORTHO05D005062 2.8e-06 56.2 99 46.5
Glyma.10G109400 Glycine max HOM05D011393 ORTHO05D013493 4.8e-06 55.5 119 37.8
Gorai.008G148200 Gossypium raimondii HOM05D004577 ORTHO05D005062 6.3e-06 55.1 57 71.9
vmacro08443 Vaccinium macrocarpon HOM05D041616 ORTHO05D005062 8.2e-06 54.7 101 48.5


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