Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-179 633.3 339 100.0
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 9.7e-160 567.0 368 84.5
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 1.8e-158 562.8 368 85.6
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 7.5e-136 487.6 324 81.2
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 2.0e-128 463.0 339 77.6
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 2.7e-125 452.6 339 73.7
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 2.3e-121 439.5 334 74.9
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 9.8e-120 434.1 322 76.7
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 1.1e-118 430.6 338 75.1
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 7.8e-117 424.5 370 64.3
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 4.3e-115 418.7 256 90.6
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 8.9e-113 411.0 331 73.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 9.9e-112 407.5 307 74.6
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 2.9e-111 406.0 354 71.2
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 4.9e-111 405.2 359 68.2
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 2.0e-104 383.3 345 70.1
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 7.1e-94 348.2 321 64.5
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 7.1e-94 348.2 234 80.3
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 1.0e-92 344.4 339 63.7
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 2.3e-92 343.2 344 64.8
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 8.7e-92 341.3 297 68.0
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 8.7e-92 341.3 368 59.8
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 9.6e-91 337.8 368 60.1
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 2.1e-90 336.7 333 65.5
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-88 329.7 369 56.9
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-87 327.4 342 62.3
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 1.4e-86 323.9 211 82.0
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 3.7e-82 309.3 368 57.1
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 3.1e-81 306.2 368 56.8
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 5.3e-81 305.4 257 71.6
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 6.9e-81 305.1 368 57.3
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 7.6e-80 301.6 325 59.1
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 9.3e-78 294.7 366 52.5
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 3.5e-77 292.7 368 51.4
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 1.1e-75 287.7 222 75.2
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 1.5e-75 287.3 336 54.8
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 1.6e-74 283.9 229 69.0
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 4.8e-74 282.3 158 91.1
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-72 276.9 166 88.6
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 1.3e-71 274.2 285 61.4
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-70 270.4 325 54.5
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 1.3e-63 247.7 196 72.4
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 5.5e-62 242.3 264 57.2
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 7.2e-62 241.9 257 61.5
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 5.7e-59 232.3 343 49.0
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-57 226.9 351 45.6
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 9.1e-57 224.9 181 70.7
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 4.5e-56 222.6 145 80.7
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 8.5e-55 218.4 307 50.8
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 1.2e-53 214.5 262 57.6
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 2.7e-53 213.4 204 60.3
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-53 213.0 309 45.6
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 4.7e-53 212.6 167 70.7
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 4.8e-50 202.6 172 68.6
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-41 174.1 96 95.8
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 3.1e-41 173.3 146 65.1
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-40 171.0 220 54.5
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-39 167.5 97 93.8
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-39 167.2 97 91.8
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 3.8e-39 166.4 142 67.6
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-38 164.9 281 45.2
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 4.7e-37 159.5 106 84.9
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-35 154.5 146 58.9
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 3.3e-35 153.3 137 63.5
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-32 144.8 83 91.6
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 3.5e-32 143.3 82 95.1
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-31 141.7 83 89.2
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 1.7e-31 141.0 85 88.2
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-31 141.0 85 88.2
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 7.5e-27 125.6 123 54.5
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 9.8e-27 125.2 173 46.8
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-26 124.4 77 83.1
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 8.3e-26 122.1 68 89.7
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-24 117.5 229 39.3
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 7.7e-24 115.5 68 85.3
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 1.3e-23 114.8 67 83.6
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-23 114.4 67 83.6
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 2.9e-23 113.6 61 98.4
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 2.9e-23 113.6 61 98.4
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 1.6e-21 107.8 71 94.4
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 3.0e-20 103.6 294 32.0
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 8.9e-20 102.1 55 90.9
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 3.4e-19 100.1 106 65.1
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 6.3e-18 95.9 59 84.7
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 7.0e-17 92.4 51 96.1
A01p32740 Brassica napus HOM05D003348 ORTHO05D039563 2.0e-16 90.9 64 92.2
C05p49980 Brassica napus HOM05D003348 ORTHO05D011028 1.1e-14 85.1 94 54.3
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.2e-12 76.3 312 22.4
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.4e-11 73.6 293 24.2
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 1.3e-10 71.6 40 90.0
Sp1g31930 Schrenkiella parvula HOM05D010384 ORTHO05D013516 4.1e-09 66.6 109 32.1
C02p32280 Brassica napus HOM05D000975 ORTHO05D003128 9.2e-09 65.5 279 23.7
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.2e-08 65.1 312 22.8
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 6.0e-08 62.8 218 25.7
BcaC05g25804 Brassica carinata HOM05D000471 ORTHO05D000199 6.0e-08 62.8 66 42.4
BolC5t30444H Brassica oleracea HOM05D000471 ORTHO05D010016 6.0e-08 62.8 66 42.4
BolC9t54214H Brassica oleracea HOM05D000975 ORTHO05D003128 7.8e-08 62.4 274 23.0
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 1.0e-07 62.0 54 51.9
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 1.0e-07 62.0 54 51.9
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 1.0e-07 62.0 54 51.9
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.3e-07 60.8 319 21.9
BolC6t38086H Brassica oleracea HOM05D003348 ORTHO05D010016 3.9e-07 60.1 33 84.8
C02p51080 Brassica napus HOM05D000975 ORTHO05D003128 5.0e-07 59.7 329 22.2
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 6.6e-07 59.3 59 49.2
A05p27750 Brassica napus HOM05D000975 ORTHO05D003128 8.6e-07 58.9 212 24.1
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-06 58.2 328 22.9
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.5e-06 57.4 159 27.0
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-06 57.4 323 21.7
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-06 57.4 328 22.3
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 3.3e-06 57.0 328 22.0
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.6e-06 56.2 103 28.2
BcaC03g15685 Brassica carinata HOM05D000975 ORTHO05D003128 5.6e-06 56.2 362 21.8
BolC2t09407H Brassica oleracea HOM05D000975 ORTHO05D003128 5.6e-06 56.2 323 22.6
C08p14260 Brassica napus HOM05D000975 ORTHO05D003128 7.3e-06 55.8 302 21.2
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 7.3e-06 55.8 71 35.2
BcaC02g09151 Brassica carinata HOM05D000975 ORTHO05D003128 9.5e-06 55.5 288 22.2


User provided reference genes

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