Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00056 Brassica carinata HOM05D010480 ORTHO05D003856 2.5e-65 251.9 122 100.0
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 3.6e-56 221.5 114 94.7
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 2.6e-22 109.0 115 49.6
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 2.7e-19 99.0 120 47.5
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 2.7e-19 99.0 120 47.5
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 6.0e-19 97.8 122 46.7
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 2.3e-18 95.9 118 47.5
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 1.1e-17 93.6 122 45.9
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 5.6e-17 91.3 122 45.1
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 1.6e-16 89.7 113 46.9
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 1.6e-16 89.7 113 46.9
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 4.8e-16 88.2 121 43.8
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 6.2e-16 87.8 115 49.6
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 6.2e-16 87.8 115 49.6
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 1.8e-15 86.3 115 48.7
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 1.8e-15 86.3 121 43.8
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 4.0e-15 85.1 114 43.9
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 4.0e-15 85.1 114 43.9
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 6.9e-15 84.3 121 42.1
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 6.9e-15 84.3 121 42.1
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 1.2e-14 83.6 117 44.4
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 1.2e-14 83.6 117 44.4
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 1.5e-14 83.2 118 44.1
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.7e-13 79.7 120 45.0
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 3.2e-12 75.5 128 39.8
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.2e-11 73.6 116 40.5
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.9e-11 70.9 128 45.3
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 7.9e-11 70.9 120 41.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 2.3e-10 69.3 117 41.0
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.1e-10 68.2 124 41.1
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 6.7e-10 67.8 119 37.8
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 8.7e-10 67.4 119 41.2
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 8.7e-10 67.4 119 41.2
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 8.7e-10 67.4 119 41.2
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.5e-09 66.6 126 44.4
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.3e-09 65.5 128 46.1
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 3.3e-09 65.5 121 38.8
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 3.3e-09 65.5 118 39.8
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 3.3e-09 65.5 121 38.8
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.3e-09 65.1 123 45.5
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 7.4e-09 64.3 115 39.1
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 1.3e-08 63.5 119 41.2
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.6e-08 63.2 115 40.0
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 2.1e-08 62.8 120 38.3
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 2.1e-08 62.8 123 38.2
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.8e-08 62.4 114 38.6
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 2.8e-08 62.4 118 39.0
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.2e-08 61.2 129 41.1
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.8e-07 59.7 124 41.1
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 1.8e-07 59.7 110 33.6
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.4e-07 59.3 102 42.2
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 2.4e-07 59.3 126 33.3
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 4.0e-07 58.5 119 36.1
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 4.0e-07 58.5 119 36.1
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 4.0e-07 58.5 119 36.1
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.3e-07 58.2 127 37.8
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.0e-07 57.4 130 40.0
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 4.5e-06 55.1 112 32.1


User provided reference genes

Program Settings