Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 1.6e-152 542.7 276 100.0
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 3.6e-152 541.6 276 99.6
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 1.9e-145 519.2 276 96.7
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 2.2e-130 469.2 287 87.1
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.6e-123 446.4 292 82.9
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 1.0e-122 443.7 282 86.2
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 1.0e-122 443.7 282 86.2
Sp1g24680 Schrenkiella parvula HOM05D009159 ORTHO05D005331 3.4e-110 402.1 298 76.5
BcaB03g13928 Brassica carinata HOM05D009159 ORTHO05D005331 5.4e-108 394.8 293 76.1
BcaB07g32463 Brassica carinata HOM05D009159 ORTHO05D005331 2.7e-107 392.5 314 71.7
AL1G42030 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 1.1e-105 387.1 332 69.0
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 2.4e-100 369.4 308 69.2
BcaC05g26859 Brassica carinata HOM05D009159 ORTHO05D005331 1.9e-97 359.8 320 66.6
AT1G28400 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 5.6e-97 358.2 337 65.0
C05p27410 Brassica napus HOM05D009159 ORTHO05D005331 2.1e-96 356.3 319 66.1
BolC5t31456H Brassica oleracea HOM05D009159 ORTHO05D005331 1.5e-94 350.1 320 65.3
A09p37640 Brassica napus HOM05D009159 ORTHO05D005331 2.0e-94 349.7 346 61.6
BraA09t39274Z Brassica rapa HOM05D009159 ORTHO05D005331 2.0e-94 349.7 346 61.6
Carub.0001s2688 Capsella rubella HOM05D009159 ORTHO05D005331 8.4e-85 317.8 342 58.2
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.3e-53 214.2 283 50.2
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 2.2e-53 213.4 284 51.1
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 3.8e-53 212.6 286 48.6
Sp2g03920 Schrenkiella parvula HOM05D009159 ORTHO05D005331 1.3e-50 204.1 125 83.2
AT2G33850 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 3.4e-46 189.5 317 42.3
AL4G29650 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 4.5e-46 189.1 313 42.8
A04p26070 Brassica napus HOM05D009159 ORTHO05D005331 3.6e-43 179.5 317 41.3
BraA04t18109Z Brassica rapa HOM05D009159 ORTHO05D005331 4.6e-43 179.1 318 41.5
Aa31LG6G10320 Aethionema arabicum HOM05D009159 ORTHO05D005331 7.4e-41 171.8 361 39.1
Carub.0004s1555 Capsella rubella HOM05D009159 ORTHO05D005331 1.3e-37 161.0 339 37.5
THA.LOC104814229 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 4.2e-36 156.0 282 44.3
THA.LOC104820566 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 4.7e-35 152.5 274 44.5
C04p63410 Brassica napus HOM05D009159 ORTHO05D005331 1.7e-32 144.1 318 38.4
BolC4t27816H Brassica oleracea HOM05D009159 ORTHO05D005331 1.7e-32 144.1 318 38.4
BcaC02g07762 Brassica carinata HOM05D009159 ORTHO05D005331 1.4e-31 141.0 239 43.1
Aa31LG9G13750 Aethionema arabicum HOM05D009159 ORTHO05D005331 6.1e-19 99.0 276 32.6
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 6.1e-11 72.4 298 33.6
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 5.2e-10 69.3 238 35.3
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 9.8e-09 65.1 293 30.4
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 9.8e-09 65.1 293 30.4
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 9.8e-09 65.1 207 32.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.8e-08 63.5 260 28.8
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.8e-08 63.5 245 29.4
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 2.8e-08 63.5 260 33.1
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.7e-08 63.2 241 29.5
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 6.3e-08 62.4 286 28.3
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.1e-07 61.6 252 30.2
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 2.4e-07 60.5 241 30.3
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 3.1e-07 60.1 302 30.1
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 4.1e-07 59.7 293 31.4
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.0e-07 58.9 109 40.4
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 2.0e-06 57.4 287 28.6
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 2.7e-06 57.0 259 30.1
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 4.5e-06 56.2 286 29.4
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 7.7e-06 55.5 197 28.9


User provided reference genes

Program Settings