Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37453 Brassica carinata HOM05D000162 ORTHO05D003288 4.3e-18 97.1 50 100.0
BcaB08g34390 Brassica carinata HOM05D027743 ORTHO05D011376 1.4e-13 82.0 44 90.9
BcaB08g34277 Brassica carinata HOM05D000162 ORTHO05D003288 1.2e-12 79.0 45 86.7
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 8.8e-11 72.8 41 82.9
BcaB08g34233 Brassica carinata HOM05D000162 ORTHO05D000090 3.3e-10 70.9 42 83.3
C08p15550 Brassica napus HOM05D000162 ORTHO05D000090 4.4e-10 70.5 40 80.0
BolC8t49183H Brassica oleracea HOM05D000162 ORTHO05D000090 4.4e-10 70.5 40 80.0
A08p32720 Brassica napus HOM05D000162 ORTHO05D000090 7.4e-10 69.7 40 80.0
BraA08t35195Z Brassica rapa HOM05D000162 ORTHO05D000090 7.4e-10 69.7 40 80.0
BcaB08g34329 Brassica carinata HOM05D000162 ORTHO05D000090 9.7e-10 69.3 36 100.0
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 9.7e-10 69.3 38 84.2
BolC8t52131H Brassica oleracea HOM05D003784 ORTHO05D004345 9.7e-10 69.3 38 84.2
BcaC07g41685 Brassica carinata HOM05D000162 ORTHO05D000090 1.7e-09 68.6 45 77.8
BolC8t52255H Brassica oleracea HOM05D000162 ORTHO05D000090 1.7e-09 68.6 45 77.8
C08p33690 Brassica napus HOM05D000162 ORTHO05D003288 2.2e-09 68.2 47 72.3
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 2.4e-08 64.7 40 72.5
BcaC04g19405 Brassica carinata HOM05D000162 ORTHO05D003288 3.1e-08 64.3 42 71.4
BolC8t52228H Brassica oleracea HOM05D000162 ORTHO05D000090 5.3e-08 63.5 40 72.5
A09p63670 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-07 62.4 37 81.1
C08p47160 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-07 62.4 37 81.1
BraA09t41715Z Brassica rapa HOM05D000162 ORTHO05D000090 1.2e-07 62.4 37 81.1
BcaB08g34250 Brassica carinata HOM05D000162 ORTHO05D003288 2.0e-07 61.6 34 91.2
BolC1t03937H Brassica oleracea HOM05D000162 ORTHO05D003288 2.0e-07 61.6 40 70.0
BolC8t52279H Brassica oleracea HOM05D000162 ORTHO05D000090 2.6e-07 61.2 39 79.5
BolC8t52250H Brassica oleracea HOM05D000162 ORTHO05D000090 3.5e-07 60.8 35 85.7
Sp3g20240 Schrenkiella parvula HOM05D000162 ORTHO05D000090 1.3e-06 58.9 36 75.0
C09p56060 Brassica napus HOM05D000162 ORTHO05D003288 1.7e-06 58.5 37 73.0
BolC9t58473H Brassica oleracea HOM05D000162 ORTHO05D003288 1.7e-06 58.5 37 73.0
BcaC07g40273 Brassica carinata HOM05D000162 ORTHO05D003288 2.2e-06 58.2 32 90.6
A09p63620 Brassica napus HOM05D000162 ORTHO05D000090 2.2e-06 58.2 36 80.6
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 2.2e-06 58.2 39 64.1
A09p63660 Brassica napus HOM05D000162 ORTHO05D000090 3.8e-06 57.4 32 87.5
BraA09t41634Z Brassica rapa HOM05D000162 ORTHO05D000090 5.0e-06 57.0 35 77.1
Gorai.009G378400 Gossypium raimondii HOM05D012722 ORTHO05D022817 5.0e-06 57.0 43 60.5
BolC8t52230H Brassica oleracea HOM05D000162 ORTHO05D003288 8.5e-06 56.2 36 77.8


User provided reference genes

Program Settings