Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37414 Brassica carinata HOM05D000471 ORTHO05D000199 4.0e-91 338.6 241 100.0
BcaB06g26768 Brassica carinata HOM05D000471 ORTHO05D000199 7.6e-82 307.8 171 97.7
BcaB05g23845 Brassica carinata HOM05D000471 ORTHO05D000199 7.8e-79 297.7 171 94.2
BcaB08g34971 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-56 224.2 121 88.4
BolC5t32511H Brassica oleracea HOM05D000471 ORTHO05D000199 3.1e-43 179.5 158 60.8
BcaC05g27767 Brassica carinata HOM05D000471 ORTHO05D015456 5.3e-43 178.7 158 60.8
C05p37680 Brassica napus HOM05D000471 ORTHO05D000199 5.3e-43 178.7 158 60.8
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 4.5e-42 175.6 158 59.5
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-41 173.7 158 58.9
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 2.9e-41 172.9 158 58.9
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 8.5e-41 171.4 158 58.2
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 8.5e-41 171.4 158 58.2
BcaB08g35230 Brassica carinata HOM05D000471 ORTHO05D015456 1.1e-40 171.0 155 60.6
BcaC09g51281 Brassica carinata HOM05D000471 ORTHO05D015456 2.5e-40 169.9 158 58.2
C09p52520 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-40 169.5 158 59.5
BolC9t58118H Brassica oleracea HOM05D000471 ORTHO05D000199 3.2e-40 169.5 158 59.5
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 5.5e-40 168.7 158 57.6
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 9.3e-40 167.9 158 57.0
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 9.3e-40 167.9 165 55.8
BcaC05g28117 Brassica carinata HOM05D000471 ORTHO05D015456 2.1e-39 166.8 158 57.0
BcaC07g37438 Brassica carinata HOM05D000471 ORTHO05D015456 2.7e-39 166.4 156 57.1
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 6.1e-39 165.2 158 57.0
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-37 159.8 158 56.3
BcaC04g22313 Brassica carinata HOM05D000471 ORTHO05D015456 1.2e-34 151.0 141 57.4
BolC3t18881H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-34 150.6 145 55.2
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 5.9e-34 148.7 141 55.3
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-33 147.1 152 52.6
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-33 147.1 139 56.8
BcaB04g17873 Brassica carinata HOM05D000471 ORTHO05D000199 1.3e-28 131.0 75 85.3
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-24 117.5 144 45.8
BcaC04g22065 Brassica carinata HOM05D000471 ORTHO05D000199 4.2e-24 115.9 148 46.6
BcaC04g19656 Brassica carinata HOM05D000471 ORTHO05D000199 2.4e-19 100.1 108 57.4
BraA06t25390Z Brassica rapa HOM05D000471 ORTHO05D015456 2.4e-19 100.1 90 57.8
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-18 97.8 90 56.7
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-18 97.8 90 57.8
BcaB07g32558 Brassica carinata HOM05D000471 ORTHO05D000199 5.0e-17 92.4 72 58.3
BcaC01g02364 Brassica carinata HOM05D000471 ORTHO05D000199 5.0e-17 92.4 108 52.8
C01p17290 Brassica napus HOM05D000471 ORTHO05D000199 5.0e-17 92.4 91 58.2
C02p57260 Brassica napus HOM05D000471 ORTHO05D015456 8.5e-17 91.7 53 69.8
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-15 87.8 81 55.6
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 3.6e-15 86.3 83 50.6
BcaB05g23800 Brassica carinata HOM05D000471 ORTHO05D000199 8.0e-15 85.1 53 62.3
A10p04540 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-14 84.3 67 59.7
BcaC01g02209 Brassica carinata HOM05D000471 ORTHO05D015456 1.8e-14 84.0 103 48.5
C03p67790 Brassica napus HOM05D000471 ORTHO05D015456 1.8e-14 84.0 103 48.5
BolSC21t60246H Brassica oleracea HOM05D000471 ORTHO05D015456 1.8e-14 84.0 103 48.5
BcaC09g51072 Brassica carinata HOM05D000471 ORTHO05D000199 8.8e-14 81.6 67 58.2
BcaC03g16851 Brassica carinata HOM05D000471 ORTHO05D000199 1.5e-13 80.9 67 58.2
A08p30620 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-10 71.2 158 34.8
BcaC02g09172 Brassica carinata HOM05D000471 ORTHO05D000199 1.6e-10 70.9 108 46.3
A05p09010 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-10 70.1 158 34.2
A10p14660 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-10 70.1 143 37.1
A05p26660 Brassica napus HOM05D000471 ORTHO05D000199 7.7e-10 68.6 161 33.5
A09p44860 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-09 67.0 158 34.2
A07p40940 Brassica napus HOM05D000471 ORTHO05D000199 2.9e-09 66.6 133 36.8
C02p34660 Brassica napus HOM05D000471 ORTHO05D000199 2.9e-09 66.6 161 32.9
C01p25040 Brassica napus HOM05D000471 ORTHO05D000199 3.8e-09 66.2 151 33.8
C04p28660 Brassica napus HOM05D000471 ORTHO05D000199 3.8e-09 66.2 161 32.9
C01p14860 Brassica napus HOM05D000471 ORTHO05D015456 6.5e-09 65.5 90 45.6
BcaC01g02210 Brassica carinata HOM05D000471 ORTHO05D027229 8.5e-09 65.1 52 63.5
BcaC05g27721 Brassica carinata HOM05D000471 ORTHO05D024295 1.1e-08 64.7 123 32.5
A03p66800 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-08 64.7 149 34.9
C06p16710 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-08 64.7 151 32.5
BolC6t36870H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-08 64.7 142 33.8
BolC1t02448H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-08 64.3 142 35.9
BraA09t38317Z Brassica rapa HOM05D000471 ORTHO05D000199 1.5e-08 64.3 64 50.0
A01p23110 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-08 63.5 161 32.9
C09p27430 Brassica napus HOM05D000471 ORTHO05D027229 3.2e-08 63.2 53 60.4
C05p34790 Brassica napus HOM05D000471 ORTHO05D000199 4.2e-08 62.8 161 31.7
BolC8t48263H Brassica oleracea HOM05D000471 ORTHO05D000199 5.5e-08 62.4 166 31.9
BolC5t32495H Brassica oleracea HOM05D000471 ORTHO05D000199 9.4e-08 61.6 132 32.6
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 1.2e-07 61.2 139 29.5
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 2.7e-07 60.1 148 31.8
C07p33570 Brassica napus HOM05D000471 ORTHO05D000199 8.0e-07 58.5 126 32.5
C03p86630 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 57.8 166 30.7
C04p28410 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-06 57.0 135 29.6
BolC4t24387H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-06 57.0 135 29.6
BolC7t44145H Brassica oleracea HOM05D000471 ORTHO05D000199 4.0e-06 56.2 122 32.0
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 5.2e-06 55.8 56 48.2
C02p43170 Brassica napus HOM05D000471 ORTHO05D000199 6.8e-06 55.5 156 28.2
C08p09090 Brassica napus HOM05D000471 ORTHO05D000199 6.8e-06 55.5 145 30.3
C01p37480 Brassica napus HOM05D000471 ORTHO05D000199 8.8e-06 55.1 183 24.0
C02p12330 Brassica napus HOM05D000471 ORTHO05D000199 8.8e-06 55.1 148 31.8


User provided reference genes

Program Settings