Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37322 Brassica carinata HOM05D002385 ORTHO05D002245 2.7e-31 137.9 63 100.0
BcaC04g19479 Brassica carinata HOM05D002385 ORTHO05D002245 1.1e-21 105.9 59 88.1
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 7.4e-21 103.2 62 72.6
BcaB06g26327 Brassica carinata HOM05D002385 ORTHO05D002245 2.1e-20 101.7 51 92.2
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 4.1e-19 97.4 50 88.0
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 4.5e-18 94.0 45 93.3
BcaC04g19478 Brassica carinata HOM05D002385 ORTHO05D002245 7.6e-18 93.2 50 92.0
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 1.7e-17 92.0 43 95.3
BcaC01g03458 Brassica carinata HOM05D002385 ORTHO05D002245 2.9e-17 91.3 57 77.2
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 9.3e-16 86.3 50 76.0
BraA10t43998Z Brassica rapa HOM05D002385 ORTHO05D002245 1.6e-15 85.5 51 80.4
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 3.6e-15 84.3 48 77.1
A10p19200 Brassica napus HOM05D002385 ORTHO05D002245 3.6e-15 84.3 41 95.1
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 3.6e-15 84.3 48 77.1
BraA10t43997Z Brassica rapa HOM05D002385 ORTHO05D002245 3.6e-15 84.3 41 95.1
C09p55310 Brassica napus HOM05D002385 ORTHO05D002245 4.6e-15 84.0 53 79.2
C09p55320 Brassica napus HOM05D002385 ORTHO05D002245 4.6e-15 84.0 53 79.2
BolC9t58392H Brassica oleracea HOM05D002385 ORTHO05D002245 4.6e-15 84.0 53 79.2
BolC9t58394H Brassica oleracea HOM05D002385 ORTHO05D002245 4.6e-15 84.0 53 79.2
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.3e-14 82.4 52 75.0
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.3e-14 81.6 52 73.1
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 5.1e-14 80.5 49 69.4
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 6.7e-14 80.1 57 71.9
BolC1t05607H Brassica oleracea HOM05D002385 ORTHO05D002245 1.1e-13 79.3 39 92.3
BolC9t58393H Brassica oleracea HOM05D002385 ORTHO05D033827 1.1e-13 79.3 39 92.3
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 1.5e-13 79.0 50 72.0
C03p52250 Brassica napus HOM05D002385 ORTHO05D002245 7.4e-13 76.6 43 81.4
BolC3t17506H Brassica oleracea HOM05D002385 ORTHO05D002245 7.4e-13 76.6 43 81.4
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 7.4e-13 76.6 57 66.7
Aa31LG8G8820 Aethionema arabicum HOM05D002385 ORTHO05D002245 8.2e-12 73.2 57 59.6
A03p42660 Brassica napus HOM05D002385 ORTHO05D002245 4.1e-11 70.9 56 62.5
BcaB06g27517 Brassica carinata HOM05D002385 ORTHO05D002245 2.0e-10 68.6 40 75.0
CARHR098140 Cardamine hirsuta HOM05D002385 ORTHO05D002245 4.5e-10 67.4 45 68.9
AT3G22231 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.7e-09 65.5 51 66.7
AT3G22235 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.7e-09 65.5 51 66.7
A04p24750 Brassica napus HOM05D002385 ORTHO05D002245 3.8e-09 64.3 64 48.4
AL3G36480 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 5.0e-09 63.9 46 67.4
CARHR150690 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.1e-08 62.8 46 67.4
AT2G32190 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.4e-08 62.4 56 55.4
Carub.0003s2240 Capsella rubella HOM05D002385 ORTHO05D002245 3.2e-08 61.2 45 66.7
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 9.4e-08 59.7 40 65.0
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.2e-07 59.3 41 63.4
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 2.1e-07 58.5 56 51.8
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 2.7e-07 58.2 56 57.1
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 6.1e-07 57.0 40 57.5
Carub.0224s0001 Capsella rubella HOM05D002385 ORTHO05D002245 7.9e-07 56.6 41 73.2
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 1.0e-06 56.2 52 53.8
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.0e-06 56.2 40 57.5
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.8e-06 55.5 52 55.8
Carub.0224s0002 Capsella rubella HOM05D002385 ORTHO05D002245 1.8e-06 55.5 35 77.1
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.8e-06 55.5 54 50.0
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 3.0e-06 54.7 52 55.8
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 3.0e-06 54.7 52 51.9
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 3.0e-06 54.7 52 51.9
FvH4_6g39680 Fragaria vesca HOM05D002385 ORTHO05D002245 3.9e-06 54.3 52 57.7
FAN05G4252 Fragaria x ananassa HOM05D002385 ORTHO05D002245 6.7e-06 53.5 51 56.9
FAN14G2541 Fragaria x ananassa HOM05D002385 ORTHO05D002245 6.7e-06 53.5 51 56.9
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 8.8e-06 53.1 52 50.0
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 8.8e-06 53.1 54 51.9
FvH4_6g39660 Fragaria vesca HOM05D002385 ORTHO05D002245 8.8e-06 53.1 51 56.9
Lj6g0002718 Lotus japonicus HOM05D002385 ORTHO05D002245 8.8e-06 53.1 37 59.5
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 8.8e-06 53.1 61 50.8


User provided reference genes

Program Settings