Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37304 Brassica carinata HOM05D036209 ORTHO05D093106 3.7e-73 278.1 140 100.0
C09p65990 Brassica napus HOM05D036209 ORTHO05D039756 3.1e-59 231.9 133 87.2
BcaC04g19284 Brassica carinata HOM05D036209 ORTHO05D039756 1.1e-56 223.4 135 83.7
BolC9t59422H Brassica oleracea HOM05D000040 ORTHO05D001305 7.3e-45 184.1 136 72.1
A10p26820 Brassica napus HOM05D000040 ORTHO05D001305 5.2e-43 177.9 136 71.3
BraA10t44735Z Brassica rapa HOM05D000040 ORTHO05D001305 5.2e-43 177.9 136 71.3
BcaC03g13330 Brassica carinata HOM05D000040 ORTHO05D001305 2.1e-31 139.4 138 57.2
A02p00640 Brassica napus HOM05D000040 ORTHO05D001305 1.1e-29 133.7 139 55.4
BraA02t05048Z Brassica rapa HOM05D000040 ORTHO05D001305 2.5e-29 132.5 139 56.1
CARHR202540 Cardamine hirsuta HOM05D000040 ORTHO05D001305 9.6e-29 130.6 142 52.1
C02p04640 Brassica napus HOM05D000040 ORTHO05D001305 1.3e-28 130.2 139 54.7
BcaB05g21505 Brassica carinata HOM05D000040 ORTHO05D001305 5.3e-27 124.8 123 56.9
CARHR202550 Cardamine hirsuta HOM05D000040 ORTHO05D001305 2.5e-21 105.9 142 47.9
BcaB08g37303 Brassica carinata HOM05D000040 ORTHO05D001305 9.6e-21 104.0 141 44.7
Sp6g32690 Schrenkiella parvula HOM05D000040 ORTHO05D001305 2.8e-20 102.4 141 44.0
Thhalv10013429m.g Eutrema salsugineum HOM05D000040 ORTHO05D001305 3.7e-20 102.1 140 43.6
A10p26810 Brassica napus HOM05D000040 ORTHO05D001305 8.1e-20 100.9 141 43.3
AL6G21320 Arabidopsis lyrata HOM05D000040 ORTHO05D001305 1.2e-18 97.1 143 46.2
BcaC04g19282 Brassica carinata HOM05D000040 ORTHO05D001305 2.0e-18 96.3 140 41.4
C09p65980 Brassica napus HOM05D000040 ORTHO05D001305 2.0e-18 96.3 140 41.4
BolC9t59421H Brassica oleracea HOM05D000040 ORTHO05D001305 2.0e-18 96.3 140 41.4
C02p04650 Brassica napus HOM05D000040 ORTHO05D001305 7.6e-18 94.4 142 42.3
BolC2t06424H Brassica oleracea HOM05D000040 ORTHO05D001305 7.6e-18 94.4 142 42.3
A02p00650 Brassica napus HOM05D000040 ORTHO05D001305 4.9e-17 91.7 142 41.5
BraA02t05049Z Brassica rapa HOM05D000040 ORTHO05D001305 4.9e-17 91.7 142 41.5
Carub.0006s0927 Capsella rubella HOM05D000040 ORTHO05D001305 1.1e-16 90.5 148 41.2
AT5G10760 Arabidopsis thaliana HOM05D000040 ORTHO05D001305 4.2e-16 88.6 143 42.0
A10p26840 Brassica napus HOM05D000040 ORTHO05D001305 4.2e-16 88.6 142 40.8
BraA10t44737Z Brassica rapa HOM05D000040 ORTHO05D001305 4.2e-16 88.6 142 40.8
AT5G10770 Arabidopsis thaliana HOM05D000040 ORTHO05D001305 5.5e-16 88.2 144 43.1
AL6G21350 Arabidopsis lyrata HOM05D000040 ORTHO05D001305 1.6e-15 86.7 144 43.8
BcaNung06637 Brassica carinata HOM05D000040 ORTHO05D001305 2.1e-15 86.3 142 38.7
BcaB08g37309 Brassica carinata HOM05D000040 ORTHO05D001305 3.5e-15 85.5 146 41.1
BcaC05g26818 Brassica carinata HOM05D000040 ORTHO05D001305 3.5e-15 85.5 142 38.7
C05p26870 Brassica napus HOM05D000040 ORTHO05D001305 3.5e-15 85.5 142 38.7
BcaC04g19285 Brassica carinata HOM05D000040 ORTHO05D001305 1.3e-14 83.6 72 68.1
C09p66020 Brassica napus HOM05D000040 ORTHO05D001305 3.9e-14 82.0 146 39.7
Carub.0006s0924 Capsella rubella HOM05D000040 ORTHO05D001305 5.1e-14 81.6 143 42.0
A09p37920 Brassica napus HOM05D000040 ORTHO05D042892 6.7e-14 81.3 121 39.7
BraA09t39304Z Brassica rapa HOM05D000040 ORTHO05D042892 6.7e-14 81.3 121 39.7
Carub.0006s0925 Capsella rubella HOM05D000040 ORTHO05D001305 1.5e-13 80.1 143 41.3
BcaB08g37308 Brassica carinata HOM05D000040 ORTHO05D001305 1.9e-13 79.7 146 39.0
A03p41870 Brassica napus HOM05D000040 ORTHO05D001305 4.3e-13 78.6 146 41.1
BraA03t13340Z Brassica rapa HOM05D000040 ORTHO05D001305 4.3e-13 78.6 146 41.1
A10p26860 Brassica napus HOM05D000040 ORTHO05D001305 9.6e-13 77.4 145 38.6
Carub.0004s0381 Capsella rubella HOM05D000040 ORTHO05D001305 9.6e-13 77.4 145 42.8
C09p66010 Brassica napus HOM05D000040 ORTHO05D001305 1.3e-12 77.0 144 37.5
BcaB08g37302 Brassica carinata HOM05D000040 ORTHO05D001305 2.1e-12 76.3 123 40.7
BolC9t59425H Brassica oleracea HOM05D000040 ORTHO05D001305 1.1e-11 73.9 145 38.6
C09p66030 Brassica napus HOM05D000040 ORTHO05D001305 1.4e-11 73.6 143 37.1
Aa31LG3G16330 Aethionema arabicum HOM05D000040 ORTHO05D001305 4.1e-11 72.0 156 34.0
BcaC04g19286 Brassica carinata HOM05D000040 ORTHO05D001305 4.1e-11 72.0 129 38.8
THA.LOC104824961 Tarenaya hassleriana HOM05D000040 ORTHO05D001305 2.9e-09 65.9 124 36.3
QL02p018253 Quercus lobata HOM05D000040 ORTHO05D001305 2.1e-07 59.7 143 33.6
BcaC03g13331 Brassica carinata HOM05D000040 ORTHO05D001305 5.1e-06 55.1 92 40.2
Ciclev10008143m.g Citrus clementina HOM05D000040 ORTHO05D001305 5.1e-06 55.1 126 36.5
Lsat_1_v5_gn_9_69981 Lactuca sativa HOM05D000040 ORTHO05D001305 8.7e-06 54.3 108 31.5


User provided reference genes

Program Settings