Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37232 Brassica carinata HOM05D000680 ORTHO05D094615 4.8e-40 167.5 94 100.0
BcaB01g05578 Brassica carinata HOM05D000680 ORTHO05D000738 2.8e-08 62.0 63 60.3
BcaB08g37233 Brassica carinata HOM05D000680 ORTHO05D000738 2.8e-08 62.0 63 61.9
C09p68270 Brassica napus HOM05D000680 ORTHO05D000738 2.8e-08 62.0 63 61.9
C09p68280 Brassica napus HOM05D000680 ORTHO05D000738 2.8e-08 62.0 63 63.5
BolC9t59576H Brassica oleracea HOM05D000680 ORTHO05D000738 2.8e-08 62.0 63 63.5
BolC9t59575H Brassica oleracea HOM05D000680 ORTHO05D000738 4.8e-08 61.2 63 60.3
A10p28080 Brassica napus HOM05D000680 ORTHO05D000738 1.4e-07 59.7 63 61.9
A10p28070 Brassica napus HOM05D000680 ORTHO05D000738 1.8e-07 59.3 63 58.7
BraA10t44856Z Brassica rapa HOM05D000680 ORTHO05D000738 1.8e-07 59.3 63 58.7
BraA10t44857Z Brassica rapa HOM05D000680 ORTHO05D000738 2.4e-07 58.9 63 61.9
C02p03710 Brassica napus HOM05D000680 ORTHO05D000738 6.9e-07 57.4 34 88.2
BolC2t06330H Brassica oleracea HOM05D000680 ORTHO05D000738 6.9e-07 57.4 34 88.2
BraA02t04964Z Brassica rapa HOM05D000680 ORTHO05D000738 6.9e-07 57.4 34 88.2
BraA02t04965Z Brassica rapa HOM05D000680 ORTHO05D000738 6.9e-07 57.4 34 88.2
Sp6g34170 Schrenkiella parvula HOM05D000680 ORTHO05D000738 6.9e-07 57.4 34 88.2
C02p03700 Brassica napus HOM05D000680 ORTHO05D000738 9.1e-07 57.0 34 88.2
BolC2t06329H Brassica oleracea HOM05D000680 ORTHO05D000738 9.1e-07 57.0 34 88.2
Thhalv10013084m.g Eutrema salsugineum HOM05D000680 ORTHO05D000738 1.5e-06 56.2 34 88.2
Thhalv10013168m.g Eutrema salsugineum HOM05D000680 ORTHO05D000738 1.5e-06 56.2 34 88.2
AL6G19400 Arabidopsis lyrata HOM05D000680 ORTHO05D000738 5.9e-06 54.3 68 52.9
AL6G19430 Arabidopsis lyrata HOM05D000680 ORTHO05D000738 5.9e-06 54.3 68 52.9
AT5G08670 Arabidopsis thaliana HOM05D000680 ORTHO05D000738 5.9e-06 54.3 68 52.9
A03p04050 Brassica napus HOM05D000680 ORTHO05D000738 5.9e-06 54.3 34 85.3
BraA03t09748Z Brassica rapa HOM05D000680 ORTHO05D000738 5.9e-06 54.3 34 85.3
Sp6g34190 Schrenkiella parvula HOM05D000680 ORTHO05D000738 5.9e-06 54.3 34 85.3
BcaB05g21574 Brassica carinata HOM05D000680 ORTHO05D000738 7.7e-06 53.9 34 82.4
BcaB05g21575 Brassica carinata HOM05D000680 ORTHO05D000738 7.7e-06 53.9 34 82.4
Carub.0006s0767 Capsella rubella HOM05D000680 ORTHO05D000738 7.7e-06 53.9 34 82.4
Carub.0007s0266 Capsella rubella HOM05D000680 ORTHO05D000738 7.7e-06 53.9 34 82.4


User provided reference genes

Program Settings