Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 8.6e-117 424.1 285 100.0
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 7.1e-87 324.7 231 84.0
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 2.8e-83 312.8 233 82.0
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 8.1e-83 311.2 235 79.6
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 8.1e-83 311.2 235 79.6
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 4.0e-82 308.9 237 78.5
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 1.7e-72 276.9 238 75.2
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 6.4e-72 275.0 242 69.8
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 3.5e-70 269.2 228 72.8
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 6.2e-67 258.5 242 68.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.7e-64 250.4 237 70.9
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 2.2e-64 250.0 237 70.9
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 2.1e-62 243.4 237 68.8
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 9.0e-58 228.0 241 65.1
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 9.0e-58 228.0 233 63.9
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 2.9e-56 223.0 242 62.0
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 1.1e-55 221.1 237 63.3
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 1.1e-55 221.1 234 65.4
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 7.9e-54 214.9 243 58.8
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 5.6e-52 208.8 238 62.6
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 2.3e-45 186.8 238 57.6
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 2.3e-45 186.8 238 57.6
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 6.7e-45 185.3 251 57.0
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 2.2e-43 180.3 254 55.1
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 6.3e-43 178.7 253 53.4
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 6.9e-42 175.3 186 63.4
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 2.2e-40 170.2 255 54.1
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 2.2e-40 170.2 204 60.3
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 5.5e-39 165.6 248 52.4
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 7.2e-39 165.2 248 52.4
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 9.4e-39 164.9 248 52.0
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 6.7e-37 158.7 234 52.1
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 6.7e-37 158.7 248 52.0
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 6.7e-37 158.7 248 52.0
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 7.9e-30 135.2 226 48.7
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 2.4e-26 123.6 233 44.6
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 9.1e-26 121.7 156 56.4
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 3.6e-22 109.8 217 47.9
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 3.9e-21 106.3 240 42.9
A02p40060 Brassica napus HOM05D008799 ORTHO05D010975 8.0e-14 82.0 167 44.9
BraA02t08970Z Brassica rapa HOM05D008799 ORTHO05D010975 1.4e-13 81.3 167 44.9
C02p60030 Brassica napus HOM05D008799 ORTHO05D010975 1.7e-08 64.3 121 47.1
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 1.2e-06 58.2 102 41.2
TWI32G0873 Tripterygium wilfordii HOM05D013263 ORTHO05D009846 2.1e-06 57.4 134 36.6
BcaC03g17942 Brassica carinata HOM05D008799 ORTHO05D010975 2.7e-06 57.0 107 45.8
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 4.7e-06 56.2 255 32.9


User provided reference genes

Program Settings