Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.7e-114 416.0 204 100.0
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 3.4e-67 258.8 146 87.0
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 9.9e-67 257.3 146 87.0
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 2.9e-66 255.8 146 86.3
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 4.9e-66 255.0 146 86.3
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 6.4e-66 254.6 146 85.6
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 1.1e-65 253.8 146 85.6
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 5.1e-63 245.0 146 83.6
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 5.6e-62 241.5 146 81.5
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 1.3e-61 240.4 146 80.8
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 3.6e-61 238.8 146 81.5
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 6.2e-61 238.0 146 82.2
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 6.2e-61 238.0 146 79.5
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 8.1e-61 237.7 146 80.1
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 8.1e-61 237.7 146 81.5
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 1.4e-60 236.9 146 81.5
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 9.0e-60 234.2 146 79.5
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 1.3e-58 230.3 146 78.8
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 1.3e-58 230.3 146 78.8
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.7e-58 229.9 146 78.1
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 3.3e-54 215.7 146 74.0
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 6.5e-50 201.4 146 68.5
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 6.5e-50 201.4 146 68.5
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 4.2e-49 198.7 145 65.5
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 4.2e-49 198.7 145 65.5
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 5.5e-49 198.4 146 67.1
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.1e-48 196.4 145 66.9
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 2.7e-48 196.1 146 66.4
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 4.6e-48 195.3 146 63.7
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 4.6e-48 195.3 153 66.0
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 6.0e-48 194.9 146 66.4
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 7.9e-48 194.5 145 66.2
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.3e-47 193.7 146 63.0
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.3e-47 193.7 146 62.3
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.8e-47 193.4 145 66.2
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 2.3e-47 193.0 146 62.3
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 1.1e-46 190.7 149 63.1
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 1.5e-46 190.3 153 65.4
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 1.5e-46 190.3 145 66.2
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 2.5e-46 189.5 139 64.7
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 5.7e-46 188.3 147 65.3
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 9.6e-46 187.6 145 63.4
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 1.3e-45 187.2 146 63.0
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 1.3e-45 187.2 145 62.8
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.3e-45 187.2 145 64.1
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.3e-45 187.2 145 61.4
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 1.6e-45 186.8 148 62.2
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.6e-45 186.8 144 63.2
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 1.6e-45 186.8 144 61.1
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 1.6e-45 186.8 148 64.9
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.1e-45 186.4 150 60.7
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 2.1e-45 186.4 149 63.1
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 2.8e-45 186.0 145 64.1
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 2.8e-45 186.0 137 68.6
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 3.7e-45 185.7 143 65.7
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 3.7e-45 185.7 145 62.8
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 6.3e-45 184.9 145 63.4
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 8.2e-45 184.5 139 62.6
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.8e-44 183.3 145 62.8
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.8e-44 183.3 145 62.8
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.4e-44 183.0 151 60.3
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 2.4e-44 183.0 145 61.4
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.4e-44 183.0 145 64.1
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.1e-44 182.2 147 61.2
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 5.3e-44 181.8 146 61.6
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 9.0e-44 181.0 145 60.0
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 9.0e-44 181.0 139 64.7
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 2.0e-43 179.9 148 59.5
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 2.0e-43 179.9 146 59.6
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 2.6e-43 179.5 139 63.3
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 3.4e-43 179.1 139 64.7
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 3.4e-43 179.1 139 64.0
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 4.5e-43 178.7 145 62.1
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 5.9e-43 178.3 147 63.9
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.0e-42 177.6 145 62.8
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 1.7e-42 176.8 148 58.1
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 2.2e-42 176.4 146 58.2
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 2.9e-42 176.0 144 61.1
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.5e-42 174.9 151 56.3
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 6.5e-42 174.9 139 61.9
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 6.5e-42 174.9 145 60.0
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 8.5e-42 174.5 209 48.8
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.1e-41 174.1 145 55.9
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.4e-41 173.7 146 60.3
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 1.9e-41 173.3 147 58.5
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 1.9e-41 173.3 146 57.5
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 3.2e-41 172.6 146 58.2
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.2e-41 172.2 151 57.6
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 4.2e-41 172.2 139 61.9
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 5.5e-41 171.8 127 66.1
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 5.5e-41 171.8 167 54.5
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 7.2e-41 171.4 143 59.4
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.2e-40 170.6 148 58.1
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.2e-40 170.6 144 59.7
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 2.7e-40 169.5 145 58.6
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 2.7e-40 169.5 139 61.9
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 2.7e-40 169.5 140 61.4
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.7e-40 169.5 149 56.4
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 4.6e-40 168.7 146 59.6
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 4.6e-40 168.7 145 57.9
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 6.1e-40 168.3 146 59.6
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 6.1e-40 168.3 145 57.2
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 7.9e-40 167.9 144 59.7
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.8e-39 166.8 151 55.0
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 3.9e-39 165.6 145 59.3
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 3.9e-39 165.6 145 57.2
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 8.7e-39 164.5 165 53.9
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 1.1e-38 164.1 143 59.4
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.1e-38 164.1 146 58.9
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 1.5e-38 163.7 146 53.4
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 1.9e-38 163.3 149 56.4
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.3e-38 162.2 145 55.2
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.7e-38 161.0 150 52.7
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.3e-37 160.6 107 71.0
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 6.3e-37 158.3 149 55.0
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 1.1e-36 157.5 147 53.7
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 2.4e-36 156.4 139 56.1
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 9.0e-36 154.5 146 50.7
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 9.0e-36 154.5 136 55.9
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 1.2e-35 154.1 147 53.1
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.0e-35 153.3 146 50.0
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 7.7e-35 151.4 79 89.9
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 7.7e-35 151.4 143 52.4
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 2.2e-34 149.8 112 66.1
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.2e-34 149.8 100 68.0
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.2e-33 146.0 147 49.7
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 7.2e-33 144.8 78 91.0
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 7.2e-33 144.8 112 63.4
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.6e-32 142.5 136 49.3
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-31 140.6 136 47.1
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.5e-30 137.1 132 51.5
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 8.2e-29 131.3 67 94.0
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-28 130.6 127 55.1
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 2.2e-26 123.2 138 44.2
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 7.9e-24 114.8 131 42.0
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 2.3e-23 113.2 139 43.2
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-20 103.6 55 92.7
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 5.3e-20 102.1 67 68.7
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.0e-18 97.8 83 55.4
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 5.0e-18 95.5 60 73.3
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 5.0e-18 95.5 58 82.8
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 7.2e-17 91.7 70 61.4
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 9.4e-17 91.3 96 46.9
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 1.2e-14 84.3 51 80.4
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.4e-12 77.4 107 43.0
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 2.4e-12 76.6 89 47.2
C06p51380 Brassica napus HOM05D004203 ORTHO05D004830 1.2e-11 74.3 43 86.0
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.5e-09 67.4 59 54.2
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 8.8e-07 58.2 45 68.9
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 8.8e-07 58.2 45 68.9
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.7e-06 55.5 144 29.2


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