Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36936 Brassica carinata HOM05D065769 ORTHO05D032166 6.1e-67 257.3 125 100.0
BcaC07g41366 Brassica carinata HOM05D065769 ORTHO05D032166 1.1e-55 219.9 125 87.2
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-09 65.1 68 50.0
C06p20160 Brassica napus HOM05D000675 ORTHO05D032166 5.8e-09 64.7 57 57.9
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 7.5e-09 64.3 63 52.4
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 7.5e-09 64.3 63 52.4
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 7.5e-09 64.3 63 52.4
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 9.9e-09 63.9 65 47.7
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-08 63.5 64 53.1
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 1.7e-08 63.2 56 53.6
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-08 62.8 68 48.5
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 2.9e-08 62.4 69 49.3
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 2.9e-08 62.4 69 49.3
BcaC05g25771 Brassica carinata HOM05D000675 ORTHO05D021848 4.9e-08 61.6 63 52.4
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-08 61.6 63 52.4
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 4.9e-08 61.6 51 56.9
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 4.9e-08 61.6 76 46.1
BcaB04g17681 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-08 61.2 49 59.2
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-08 61.2 55 56.4
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-08 60.8 47 57.4
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-08 60.8 53 54.7
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 8.3e-08 60.8 53 54.7
BraA07t28911Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-07 60.5 52 57.7
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-07 60.1 59 52.5
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-07 60.1 59 50.8
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-07 60.1 62 50.0
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-07 59.7 59 50.8
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-07 59.3 59 50.8
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 2.4e-07 59.3 59 50.8
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 2.4e-07 59.3 59 50.8
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 2.4e-07 59.3 59 50.8
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-07 58.9 64 51.6
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 3.2e-07 58.9 64 51.6
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-07 58.5 64 51.6
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 7.1e-07 57.8 49 53.1
A10p07500 Brassica napus HOM05D031908 ORTHO05D021848 7.1e-07 57.8 62 48.4
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 9.2e-07 57.4 64 50.0
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 9.2e-07 57.4 52 55.8
A07p13050 Brassica napus HOM05D000675 ORTHO05D021848 1.2e-06 57.0 64 50.0
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.2e-06 57.0 65 49.2
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 1.6e-06 56.6 52 53.8
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 1.6e-06 56.6 66 47.0
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-06 56.2 50 54.0
A08p06340 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-06 56.2 52 53.8
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-06 56.2 62 51.6
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-06 56.2 52 53.8
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 2.1e-06 56.2 52 53.8
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-06 55.8 50 56.0
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 2.7e-06 55.8 50 56.0
BraA07t28421Z Brassica rapa HOM05D000675 ORTHO05D000395 2.7e-06 55.8 52 53.8
A02p08880 Brassica napus HOM05D000675 ORTHO05D013243 3.5e-06 55.5 52 53.8
BraA02t05957Z Brassica rapa HOM05D000675 ORTHO05D013243 3.5e-06 55.5 52 53.8
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 4.6e-06 55.1 54 50.0
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-06 54.7 49 53.1
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-06 54.7 55 52.7
A07p36210 Brassica napus HOM05D000675 ORTHO05D013243 6.0e-06 54.7 52 51.9
A08p11640 Brassica napus HOM05D000675 ORTHO05D013243 6.0e-06 54.7 52 51.9
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 6.0e-06 54.7 70 44.3
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 6.0e-06 54.7 70 44.3
BolC9t57807H Brassica oleracea HOM05D000675 ORTHO05D013243 6.0e-06 54.7 52 53.8
SpUn1900_0010 Schrenkiella parvula HOM05D000675 ORTHO05D000395 6.0e-06 54.7 73 45.2
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 7.8e-06 54.3 54 51.9
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 7.8e-06 54.3 70 44.3
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 7.8e-06 54.3 70 44.3
BolC8t48443H Brassica oleracea HOM05D000675 ORTHO05D013243 7.8e-06 54.3 62 45.2
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 7.8e-06 54.3 70 44.3


User provided reference genes

Program Settings