Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36881 Brassica carinata HOM05D004418 ORTHO05D005222 1.3e-162 576.6 346 100.0
BolC9t58946H Brassica oleracea HOM05D004418 ORTHO05D005222 6.7e-140 501.1 352 84.9
A10p23020 Brassica napus HOM05D004418 ORTHO05D005222 8.7e-140 500.7 352 87.5
BraA10t44371Z Brassica rapa HOM05D004418 ORTHO05D005222 8.7e-140 500.7 352 87.5
C09p60990 Brassica napus HOM05D004418 ORTHO05D005222 3.3e-139 498.8 352 84.7
BcaC04g18914 Brassica carinata HOM05D004418 ORTHO05D005222 4.5e-136 488.4 352 83.0
C03p08770 Brassica napus HOM05D004418 ORTHO05D005222 2.4e-129 466.1 353 81.3
BolC3t13373H Brassica oleracea HOM05D004418 ORTHO05D005222 1.5e-128 463.4 360 79.7
BraA03t10082Z Brassica rapa HOM05D004418 ORTHO05D005222 5.9e-128 461.5 361 77.8
Thhalv10014096m.g Eutrema salsugineum HOM05D004418 ORTHO05D005222 1.3e-127 460.3 357 77.3
A03p07540 Brassica napus HOM05D004418 ORTHO05D005222 8.5e-127 457.6 354 79.9
AL6G26910 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 1.2e-125 453.8 355 75.8
Sp6g28100 Schrenkiella parvula HOM05D004418 ORTHO05D005222 3.0e-124 449.1 348 84.8
AT5G16030 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 4.1e-121 438.7 355 79.7
CARHR197280 Cardamine hirsuta HOM05D004418 ORTHO05D005222 7.7e-120 434.5 355 76.1
BcaNung02220 Brassica carinata HOM05D004418 ORTHO05D005222 1.0e-119 434.1 352 80.4
BcaC03g18465 Brassica carinata HOM05D004418 ORTHO05D005222 2.5e-118 429.5 353 77.6
C02p08130 Brassica napus HOM05D004418 ORTHO05D005222 2.5e-118 429.5 353 77.6
A02p03360 Brassica napus HOM05D004418 ORTHO05D005222 1.2e-117 427.2 354 75.7
BraA02t05307Z Brassica rapa HOM05D004418 ORTHO05D005222 3.0e-116 422.5 355 75.5
Carub.0006s1422 Capsella rubella HOM05D004418 ORTHO05D005222 2.6e-115 419.5 354 76.3
BolC2t06735H Brassica oleracea HOM05D004418 ORTHO05D005222 2.2e-114 416.4 369 74.3
BcaB01g05008 Brassica carinata HOM05D004418 ORTHO05D005222 9.4e-110 401.0 252 84.1
Aa31LG11G13580 Aethionema arabicum HOM05D004418 ORTHO05D005222 1.4e-97 360.5 357 66.7
THA.LOC104803001 Tarenaya hassleriana HOM05D004418 ORTHO05D005222 3.6e-85 319.3 251 73.7
Aa31LG5G13000 Aethionema arabicum HOM05D004418 ORTHO05D005222 2.5e-78 296.6 249 63.9
AL3G11860 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 1.2e-72 277.7 348 52.3
AT3G02500 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 1.0e-71 274.6 345 52.2
CARHR076500 Cardamine hirsuta HOM05D004418 ORTHO05D005222 5.8e-67 258.8 248 60.1
Carub.0003s0161 Capsella rubella HOM05D004418 ORTHO05D005222 1.3e-63 247.7 347 48.7
Thecc.04G137500 Theobroma cacao HOM05D004418 ORTHO05D005222 4.7e-61 239.2 347 48.1
COL.COLO4_16191 Corchorus olitorius HOM05D004418 ORTHO05D005222 6.8e-60 235.3 244 59.0
Gohir.A07G071400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 6.8e-60 235.3 255 56.9
Manes.01G108300 Manihot esculenta HOM05D004418 ORTHO05D005222 1.2e-59 234.6 241 58.9
Gohir.D07G075900 Gossypium hirsutum HOM05D004418 ORTHO05D005222 3.4e-59 233.0 244 57.8
Cpa.g.sc179.25 Carica papaya HOM05D004418 ORTHO05D005222 4.4e-59 232.6 249 57.8
ClCG11G005360 Citrullus lanatus HOM05D004418 ORTHO05D005222 1.3e-58 231.1 351 46.2
Gorai.001G080100 Gossypium raimondii HOM05D004418 ORTHO05D005222 1.3e-58 231.1 244 57.4
CiPaw.04G040400 Carya illinoinensis HOM05D004418 ORTHO05D005222 4.9e-58 229.2 231 61.0
Haze_14129 Corylus avellana HOM05D004418 ORTHO05D005222 3.2e-57 226.5 234 59.8
Cfa007945 Carpinus fangiana HOM05D004418 ORTHO05D005222 1.2e-56 224.6 257 56.4
BcaC01g04442 Brassica carinata HOM05D004418 ORTHO05D005222 1.3e-55 221.1 245 55.9
Sed0007454 Sechium edule HOM05D004418 ORTHO05D005222 2.3e-55 220.3 348 45.7
BolC3t16277H Brassica oleracea HOM05D004418 ORTHO05D005222 3.0e-55 219.9 340 45.3
C03p40110 Brassica napus HOM05D004418 ORTHO05D005222 3.9e-55 219.5 340 45.3
CsaV3_5G039140 Cucumis sativus L. HOM05D004418 ORTHO05D005222 3.9e-55 219.5 350 45.7
MD17G1074300 Malus domestica HOM05D004418 ORTHO05D005222 3.9e-55 219.5 344 45.6
Oeu030758.1 Olea europaea HOM05D004418 ORTHO05D005222 3.9e-55 219.5 240 56.2
Prupe.3G239700 Prunus persica HOM05D004418 ORTHO05D005222 3.9e-55 219.5 256 55.1
Sabra04G0078200 Salix brachista HOM05D004418 ORTHO05D005222 2.5e-54 216.9 265 54.0
Dinv34848 Davidia involucrata HOM05D004418 ORTHO05D005222 3.3e-54 216.5 256 55.9
Duzib133G1448 Durio zibethinus HOM05D004418 ORTHO05D005222 3.3e-54 216.5 270 53.7
Nn4g23746 Nelumbo nucifera HOM05D004418 ORTHO05D005222 3.3e-54 216.5 245 55.5
CiPaw.03G059700 Carya illinoinensis HOM05D004418 ORTHO05D005222 4.3e-54 216.1 256 55.1
RcHm_v2.0_Chr2g0163131 Rosa chinensis HOM05D004418 ORTHO05D005222 4.3e-54 216.1 233 56.7
Medtr7g018370 Medicago truncatula HOM05D004418 ORTHO05D005222 7.3e-54 215.3 230 57.8
Psat3g190400 Pisum sativum HOM05D004418 ORTHO05D005222 7.3e-54 215.3 231 56.7
QL02p052558 Quercus lobata HOM05D004418 ORTHO05D005222 9.6e-54 214.9 235 57.0
arahy.Tifrunner.gnm1.ann1.FZV4HQ Arachis hypogaea HOM05D004418 ORTHO05D005222 1.2e-53 214.5 245 56.3
arahy.Tifrunner.gnm1.ann1.I4UW8B Arachis hypogaea HOM05D004418 ORTHO05D005222 1.2e-53 214.5 245 56.3
Ciclev10012140m.g Citrus clementina HOM05D004418 ORTHO05D005222 1.2e-53 214.5 254 55.1
Lj1g0022779 Lotus japonicus HOM05D004418 ORTHO05D005222 1.2e-53 214.5 244 55.7
Nitab4.5_0008781g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.8e-53 213.4 257 54.9
Cc07_g09010 Coffea canephora HOM05D004418 ORTHO05D005222 3.6e-53 213.0 233 57.5
Nitab4.5_0004118g0100 Nicotiana tabacum HOM05D004418 ORTHO05D005222 4.7e-53 212.6 257 54.5
GSVIVG01036443001 Vitis vinifera HOM05D004418 ORTHO05D005222 4.7e-53 212.6 249 55.4
A03p32980 Brassica napus HOM05D004418 ORTHO05D005222 6.2e-53 212.2 340 42.9
FAN02G0751 Fragaria x ananassa HOM05D004418 ORTHO05D005222 6.2e-53 212.2 231 57.1
TAR462G0001 Trochodendron aralioides HOM05D004418 ORTHO05D005222 6.2e-53 212.2 254 54.7
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 1.1e-52 211.5 231 55.8
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 1.1e-52 211.5 221 58.8
BraA03t12466Z Brassica rapa HOM05D004418 ORTHO05D005222 1.4e-52 211.1 340 43.5
Glyma.08G256900 Glycine max HOM05D004418 ORTHO05D005222 1.8e-52 210.7 252 55.2
Glyma.18G281000 Glycine max HOM05D004418 ORTHO05D005222 3.1e-52 209.9 255 54.9
FAN14G2637 Fragaria x ananassa HOM05D004418 ORTHO05D005222 4.0e-52 209.5 231 56.3
FvH4_6g45350 Fragaria vesca HOM05D004418 ORTHO05D005222 5.3e-52 209.1 231 56.3
TPR.G4552 Trifolium pratense HOM05D004418 ORTHO05D005222 6.9e-52 208.8 248 54.4
MD09G1084800 Malus domestica HOM05D004418 ORTHO05D005222 9.0e-52 208.4 348 46.3
Potri.017G112600 Populus trichocarpa HOM05D004418 ORTHO05D005222 1.2e-51 208.0 336 44.6
CANSAT64G2567 Cannabis sativa HOM05D004418 ORTHO05D005222 1.5e-51 207.6 236 55.1
FAN05G3990 Fragaria x ananassa HOM05D004418 ORTHO05D005222 1.5e-51 207.6 231 55.8
ClCG05G012070 Citrullus lanatus HOM05D004418 ORTHO05D005222 4.4e-51 206.1 260 51.2
CsaV3_3G020330 Cucumis sativus L. HOM05D004418 ORTHO05D005222 4.4e-51 206.1 350 42.0
Dinv33929 Davidia involucrata HOM05D004418 ORTHO05D005222 9.9e-51 204.9 257 54.5
MELO3C023762.2 Cucumis melo HOM05D004418 ORTHO05D005222 1.3e-50 204.5 350 41.7
Oeu052993.1 Olea europaea HOM05D004418 ORTHO05D005222 6.4e-50 202.2 223 54.3
BcaC01g04556 Brassica carinata HOM05D004418 ORTHO05D005222 1.1e-49 201.4 340 44.1
Actinidia15868 Actinidia chinensis HOM05D004418 ORTHO05D005222 1.4e-49 201.1 249 52.6
CAN.G358.137 Capsicum annuum HOM05D004418 ORTHO05D005222 1.9e-49 200.7 237 53.6
Sopen02g014090 Solanum pennellii HOM05D004418 ORTHO05D005222 2.4e-49 200.3 337 47.5
Solyc02g063030.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 3.2e-49 199.9 233 53.6
Potri.004G102200 Populus trichocarpa HOM05D004418 ORTHO05D005222 5.4e-49 199.1 261 50.6
Sopen02g030440 Solanum pennellii HOM05D004418 ORTHO05D005222 5.4e-49 199.1 262 53.1
Eucgr.F02480 Eucalyptus grandis HOM05D004418 ORTHO05D005222 7.1e-49 198.7 244 52.0
Gohir.D11G168666 Gossypium hirsutum HOM05D004418 ORTHO05D005222 3.5e-48 196.4 254 52.0
Solyc02g085750.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 4.6e-48 196.1 259 51.7
Lalb_Chr06g0174671 Lupinus albus HOM05D004418 ORTHO05D005222 7.8e-48 195.3 262 50.4
Phvul.004G062900 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 7.8e-48 195.3 254 50.8
Hma1.2p1_0550F.1_g177250 Hydrangea macrophylla HOM05D004418 ORTHO05D005222 1.0e-47 194.9 247 50.6
Actinidia36309 Actinidia chinensis HOM05D004418 ORTHO05D005222 1.3e-47 194.5 231 52.4
Nitab4.5_0000628g0180 Nicotiana tabacum HOM05D004418 ORTHO05D005222 1.7e-47 194.1 249 51.4
Phvul.008G020100 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 1.7e-47 194.1 212 56.6
Gohir.A11G162400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 2.3e-47 193.7 254 50.4
Sabra17G0093300 Salix brachista HOM05D004418 ORTHO05D005222 2.3e-47 193.7 265 54.7
Nn3g17760 Nelumbo nucifera HOM05D004418 ORTHO05D005222 5.1e-47 192.6 258 51.6
CSS0011812 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 6.6e-47 192.2 256 52.0
MSTRG.23562 Avicennia marina HOM05D004418 ORTHO05D005222 8.7e-47 191.8 230 55.7
EL10Ac2g04606 Beta vulgaris HOM05D004418 ORTHO05D005222 8.7e-47 191.8 269 48.3
TAR278G0004 Trochodendron aralioides HOM05D004418 ORTHO05D005222 8.7e-47 191.8 233 55.4
Ah.10g037550 Amaranthus hybridus HOM05D004418 ORTHO05D005222 1.5e-46 191.0 263 51.0
Gorai.007G180200 Gossypium raimondii HOM05D004418 ORTHO05D005222 1.9e-46 190.7 246 50.8
VMungo0464G1669 Vigna mungo HOM05D004418 ORTHO05D005222 3.3e-46 189.9 254 50.0
Sed0007873 Sechium edule HOM05D004418 ORTHO05D005222 4.3e-46 189.5 260 45.8
Glyma.19G045400 Glycine max HOM05D004418 ORTHO05D005222 7.3e-46 188.7 258 46.9
DCAR_017217 Daucus carota HOM05D004418 ORTHO05D005222 1.6e-45 187.6 249 52.6
Glyma.13G046900 Glycine max HOM05D004418 ORTHO05D005222 1.6e-45 187.6 255 48.6
Atru.chr8.826 Acer truncatum HOM05D004418 ORTHO05D005222 3.6e-45 186.4 214 54.2
CSS0030087 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 8.1e-45 185.3 283 49.8
HanXRQChr12g0376561 Helianthus annuus HOM05D004418 ORTHO05D005222 8.1e-45 185.3 257 50.6
ECA246G2173 Erigeron canadensis HOM05D004418 ORTHO05D005222 1.1e-44 184.9 269 48.7
MELO3C022089.2 Cucumis melo HOM05D004418 ORTHO05D005222 1.8e-44 184.1 154 67.5
Aqoxy3G00366 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 2.4e-44 183.7 252 46.0
Psat1g012960 Pisum sativum HOM05D004418 ORTHO05D005222 3.1e-44 183.3 252 50.0
CSS0000095 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 6.9e-44 182.2 260 51.5
Lj2g0026691 Lotus japonicus HOM05D004418 ORTHO05D005222 9.0e-44 181.8 254 49.2
PGSC0003DMG400024185 Solanum tuberosum HOM05D004418 ORTHO05D005222 1.2e-43 181.4 356 39.9
Medtr6g017240 Medicago truncatula HOM05D004418 ORTHO05D005222 2.0e-43 180.6 262 47.3
TPR.G32452 Trifolium pratense HOM05D004418 ORTHO05D005222 1.3e-42 177.9 266 47.7
CAN.G23.16 Capsicum annuum HOM05D004418 ORTHO05D005222 2.2e-42 177.2 227 50.2
Lalb_Chr10g0092251 Lupinus albus HOM05D004418 ORTHO05D005222 2.9e-42 176.8 256 48.8
TWI75G1693 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 3.8e-42 176.4 342 39.8
Nitab4.5_0007207g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 3.2e-41 173.3 259 46.7
PSO017G3409 Papaver somniferum HOM05D004418 ORTHO05D005222 4.2e-41 172.9 274 47.1
PGR042G3608 Punica granatum HOM05D004418 ORTHO05D005222 1.2e-40 171.4 207 54.6
Hund13733 Selenicereus undatus HOM05D004418 ORTHO05D005222 2.1e-40 170.6 156 64.1
Peaxi162Scf01327g00136 Petunia axillaris HOM05D004418 ORTHO05D005222 4.6e-40 169.5 256 49.6
Migut.L00303 Erythranthe guttata HOM05D004418 ORTHO05D005222 6.0e-40 169.1 244 47.5
PSO478G2162 Papaver somniferum HOM05D004418 ORTHO05D005222 1.0e-39 168.3 267 46.4
Aqoxy3G03921 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 3.0e-39 166.8 304 43.1
TWI79G1555 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 5.6e-38 162.5 381 36.0
MSTRG.3576 Avicennia marina HOM05D004418 ORTHO05D005222 2.8e-37 160.2 253 47.8
SGA_v2.0_scaffold33G13429 Striga asiatica HOM05D004418 ORTHO05D005222 3.7e-37 159.8 259 44.8
Lj4A194T37 Lonicera japonica HOM05D004418 ORTHO05D005222 6.2e-37 159.1 220 51.4
Migut.H00200 Erythranthe guttata HOM05D004418 ORTHO05D005222 2.4e-36 157.1 253 45.5
Peaxi162Scf00501g00012 Petunia axillaris HOM05D004418 ORTHO05D005222 4.0e-36 156.4 228 47.8
Lsat_1_v5_gn_3_80201 Lactuca sativa HOM05D004418 ORTHO05D005222 3.4e-35 153.3 166 55.4
MBI09_g05206_MAGBIO Magnolia biondii HOM05D004418 ORTHO05D005222 4.2e-33 146.4 272 40.8
PGR004G1179 Punica granatum HOM05D004418 ORTHO05D005222 2.1e-29 134.0 253 41.1
SalBow5G1629 Salvia bowleyana HOM05D004418 ORTHO05D005222 8.2e-29 132.1 207 47.8
Ah.16g101950 Amaranthus hybridus HOM05D004418 ORTHO05D005222 2.6e-27 127.1 174 48.3
arahy.Tifrunner.gnm1.ann1.SB4BUV Arachis hypogaea HOM05D004418 ORTHO05D005222 3.4e-27 126.7 251 38.6
Oeu052991.1 Olea europaea HOM05D004418 ORTHO05D005222 4.6e-24 116.3 107 60.7
SalBow3G3548 Salvia bowleyana HOM05D004418 ORTHO05D005222 4.6e-24 116.3 238 37.4
vmacro05572 Vaccinium macrocarpon HOM05D004418 ORTHO05D005222 6.0e-24 115.9 198 40.4
SalBow3G2364 Salvia bowleyana HOM05D004418 ORTHO05D005222 7.9e-24 115.5 238 37.4
RcHm_v2.0_Chr4g0404491 Rosa chinensis HOM05D004418 ORTHO05D005222 3.1e-20 103.6 105 59.0
ATR0686G091 Amborella trichopoda HOM05D004418 ORTHO05D005222 6.9e-20 102.4 96 56.2
arahy.Tifrunner.gnm1.ann1.554YPX Arachis hypogaea HOM05D004418 ORTHO05D005222 2.0e-19 100.9 151 45.0
SGA_v2.0_scaffold49G18089 Striga asiatica HOM05D004418 ORTHO05D005222 1.7e-18 97.8 199 36.2
Sc11g0008220 Simmondsia chinensis HOM05D004418 ORTHO05D005222 7.2e-17 92.4 147 42.9
unitig_32.g11894 Utricularia gibba HOM05D004418 ORTHO05D005222 1.7e-13 81.3 56 67.9
CAN.G144.13 Capsicum annuum HOM05D004418 ORTHO05D005222 1.0e-10 72.0 67 62.7


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