Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36819 Brassica carinata HOM05D001244 ORTHO05D001076 7.5e-49 196.8 96 100.0
BcaB08g36823 Brassica carinata HOM05D001244 ORTHO05D001076 4.2e-44 181.0 90 96.7
C09p60420 Brassica napus HOM05D001244 ORTHO05D001076 4.2e-44 181.0 90 96.7
BcaB08g36822 Brassica carinata HOM05D001244 ORTHO05D001076 2.8e-43 178.3 90 95.6
BcaB08g36826 Brassica carinata HOM05D001244 ORTHO05D001076 2.8e-43 178.3 90 95.6
C09p60410 Brassica napus HOM05D001244 ORTHO05D001076 2.8e-43 178.3 90 95.6
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 8.0e-43 176.8 90 93.3
BraA10t44314Z Brassica rapa HOM05D001244 ORTHO05D001076 8.0e-43 176.8 90 93.3
BolC9t58875H Brassica oleracea HOM05D001244 ORTHO05D001076 1.2e-41 172.9 90 91.1
BolC9t58873H Brassica oleracea HOM05D001244 ORTHO05D001076 1.5e-41 172.6 88 94.3
BraA10t44312Z Brassica rapa HOM05D001244 ORTHO05D001076 3.4e-41 171.4 90 92.2
BcaB08g36811 Brassica carinata HOM05D001244 ORTHO05D001076 5.4e-39 164.1 90 86.7
BcaB08g36814 Brassica carinata HOM05D001244 ORTHO05D001076 5.4e-39 164.1 90 87.8
BcaB08g36817 Brassica carinata HOM05D001244 ORTHO05D001076 5.4e-39 164.1 90 86.7
BcaB08g36821 Brassica carinata HOM05D001244 ORTHO05D001076 8.9e-34 146.7 90 82.2
A01p17680 Brassica napus HOM05D001244 ORTHO05D001076 4.9e-32 141.0 90 77.8
BraA01t01722Z Brassica rapa HOM05D001244 ORTHO05D001076 4.9e-32 141.0 90 77.8
BraA01t01723Z Brassica rapa HOM05D001244 ORTHO05D001076 4.9e-32 141.0 90 77.8
BraA01t01724Z Brassica rapa HOM05D001244 ORTHO05D001076 4.9e-32 141.0 90 77.8
BcaC09g50704 Brassica carinata HOM05D001244 ORTHO05D001076 8.3e-32 140.2 93 75.3
BcaC09g50703 Brassica carinata HOM05D001244 ORTHO05D001076 1.1e-31 139.8 93 75.3
A02p03740 Brassica napus HOM05D001244 ORTHO05D001076 1.1e-31 139.8 93 75.3
BolC1t02160H Brassica oleracea HOM05D001244 ORTHO05D001076 1.1e-31 139.8 93 75.3
BolC1t02161H Brassica oleracea HOM05D001244 ORTHO05D001076 1.1e-31 139.8 93 75.3
BolC1t02166H Brassica oleracea HOM05D001244 ORTHO05D001076 1.1e-31 139.8 93 75.3
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 1.1e-31 139.8 93 75.3
BcaC09g50708 Brassica carinata HOM05D001244 ORTHO05D001076 1.4e-31 139.4 93 75.3
C02p08530 Brassica napus HOM05D001244 ORTHO05D001076 1.9e-31 139.0 93 75.3
AT5G16700 Arabidopsis thaliana HOM05D001244 ORTHO05D001076 2.4e-31 138.7 90 76.7
A01p17670 Brassica napus HOM05D001244 ORTHO05D001076 2.4e-31 138.7 90 76.7
C01p22330 Brassica napus HOM05D001244 ORTHO05D001076 3.2e-31 138.3 93 75.3
Sp6g27460 Schrenkiella parvula HOM05D001244 ORTHO05D001076 4.1e-31 137.9 90 74.4
A02p03720 Brassica napus HOM05D001244 ORTHO05D001076 2.7e-30 135.2 93 73.1
BcaC03g18511 Brassica carinata HOM05D001244 ORTHO05D001076 3.5e-30 134.8 93 73.1
BolC2t06769H Brassica oleracea HOM05D001244 ORTHO05D001076 3.5e-30 134.8 93 73.1
BcaB06g26523 Brassica carinata HOM05D001244 ORTHO05D001076 6.0e-30 134.0 90 72.2
Thhalv10015466m.g Eutrema salsugineum HOM05D001244 ORTHO05D001076 1.0e-29 133.3 90 73.3
C02p08550 Brassica napus HOM05D001244 ORTHO05D001076 1.7e-29 132.5 93 72.0
AL6G27700 Arabidopsis lyrata HOM05D001244 ORTHO05D001076 5.0e-29 131.0 90 72.2
Carub.0006s1491 Capsella rubella HOM05D001244 ORTHO05D001076 1.5e-25 119.4 90 66.7
CARHR196490 Cardamine hirsuta HOM05D001244 ORTHO05D001076 1.2e-22 109.8 90 63.3
AL6G28590 Arabidopsis lyrata HOM05D001244 ORTHO05D001076 1.5e-09 66.2 93 45.2
AT5G17500 Arabidopsis thaliana HOM05D001244 ORTHO05D001076 6.4e-08 60.8 93 44.1
C09p59640 Brassica napus HOM05D001244 ORTHO05D001076 8.4e-08 60.5 90 42.2
BolC9t58803H Brassica oleracea HOM05D001244 ORTHO05D001076 8.4e-08 60.5 90 42.2
THA.LOC104820833 Tarenaya hassleriana HOM05D001244 ORTHO05D001076 8.4e-08 60.5 91 40.7
Carub.0006s1573 Capsella rubella HOM05D001244 ORTHO05D001076 1.1e-07 60.1 92 41.3
A10p21890 Brassica napus HOM05D001244 ORTHO05D001076 1.4e-07 59.7 90 41.1
BraA10t44248Z Brassica rapa HOM05D001244 ORTHO05D001076 1.4e-07 59.7 90 41.1
Sp6g26720 Schrenkiella parvula HOM05D001244 ORTHO05D001076 1.4e-07 59.7 92 40.2
Thhalv10015581m.g Eutrema salsugineum HOM05D001244 ORTHO05D001076 7.1e-07 57.4 94 39.4


User provided reference genes

Program Settings