Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36739 Brassica carinata HOM05D008189 ORTHO05D031905 2.6e-212 741.9 405 100.0
BcaC06g34469 Brassica carinata HOM05D008189 ORTHO05D031905 9.6e-138 494.2 415 69.9
C07p28110 Brassica napus HOM05D008189 ORTHO05D031905 7.0e-64 248.8 383 47.0
BcaC02g10468 Brassica carinata HOM05D008189 ORTHO05D039236 2.3e-54 217.2 131 85.5
BcaB06g28554 Brassica carinata HOM05D008189 ORTHO05D093314 6.6e-54 215.7 221 60.6
BcaC03g14338 Brassica carinata HOM05D008189 ORTHO05D027657 1.3e-49 201.4 387 40.3
BcaC03g17610 Brassica carinata HOM05D008189 ORTHO05D027657 1.2e-47 194.9 403 38.5
BcaC08g45600 Brassica carinata HOM05D008189 ORTHO05D012600 1.9e-45 187.6 268 44.0
C04p28530 Brassica napus HOM05D008189 ORTHO05D039236 9.5e-37 158.7 90 87.8
BcaC02g10962 Brassica carinata HOM05D008189 ORTHO05D027657 3.7e-33 146.7 371 32.6
A08p29360 Brassica napus HOM05D008189 ORTHO05D012600 6.4e-33 146.0 183 46.4
BraA08t34871Z Brassica rapa HOM05D008189 ORTHO05D012600 6.4e-33 146.0 183 46.4
BcaB06g28909 Brassica carinata HOM05D008189 ORTHO05D012600 2.3e-30 137.5 114 67.5
BolC9t54712H Brassica oleracea HOM05D008189 ORTHO05D012600 9.5e-29 132.1 139 51.8
BcaC04g22530 Brassica carinata HOM05D008189 ORTHO05D012600 8.1e-28 129.0 147 48.3
C09p18170 Brassica napus HOM05D008189 ORTHO05D012600 8.1e-28 129.0 147 48.3
BcaC01g06748 Brassica carinata HOM05D008189 ORTHO05D012600 2.6e-26 124.0 170 44.7
BolC3t16068H Brassica oleracea HOM05D008189 ORTHO05D012600 2.6e-26 124.0 170 44.7
C03p37770 Brassica napus HOM05D008189 ORTHO05D012600 4.4e-26 123.2 147 46.9
BcaNung00302 Brassica carinata HOM05D008189 ORTHO05D012600 7.6e-26 122.5 240 37.5
BcaB03g13249 Brassica carinata HOM05D008189 ORTHO05D012600 3.8e-25 120.2 197 43.1
BcaNung04993 Brassica carinata HOM05D008189 ORTHO05D012600 4.9e-25 119.8 86 73.3
C03p73390 Brassica napus HOM05D008189 ORTHO05D020139 3.2e-24 117.1 261 34.1
A04p17460 Brassica napus HOM05D000848 ORTHO05D003342 5.1e-22 109.8 467 28.5
BraA04t17369Z Brassica rapa HOM05D000848 ORTHO05D016609 5.1e-22 109.8 467 28.5
C07p53670 Brassica napus HOM05D008189 ORTHO05D027403 1.5e-21 108.2 154 46.8
BcaC01g06423 Brassica carinata HOM05D000848 ORTHO05D020139 3.3e-21 107.1 539 27.5
BcaC08g47118 Brassica carinata HOM05D008189 ORTHO05D014957 7.3e-21 105.9 217 37.3
C02p17290 Brassica napus HOM05D008189 ORTHO05D027657 2.4e-19 100.9 372 28.8
C03p18620 Brassica napus HOM05D008189 ORTHO05D020139 4.0e-19 100.1 135 45.2
BolC1t01664H Brassica oleracea HOM05D008189 ORTHO05D003342 5.3e-19 99.8 176 43.2
BolC3t20367H Brassica oleracea HOM05D008189 ORTHO05D020139 1.5e-18 98.2 167 40.7
BcaC04g20103 Brassica carinata HOM05D008189 ORTHO05D000076 2.6e-18 97.4 218 36.7
BolC2t10357H Brassica oleracea HOM05D008189 ORTHO05D003342 2.6e-18 97.4 181 40.9
BcaC04g22165 Brassica carinata HOM05D008189 ORTHO05D016609 4.4e-18 96.7 147 45.6
C09p22610 Brassica napus HOM05D008189 ORTHO05D016609 4.4e-18 96.7 147 45.6
BolC9t55178H Brassica oleracea HOM05D008189 ORTHO05D016609 4.4e-18 96.7 147 45.6
Thhalv10029505m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 7.6e-18 95.9 165 42.4
BolC2t07829H Brassica oleracea HOM05D008189 ORTHO05D012600 1.7e-17 94.7 75 64.0
BcaC05g30003 Brassica carinata HOM05D008189 ORTHO05D012600 4.9e-17 93.2 166 40.4
BolC8t52239H Brassica oleracea HOM05D008189 ORTHO05D016609 4.9e-17 93.2 120 48.3
BcaC04g21741 Brassica carinata HOM05D008189 ORTHO05D018627 1.9e-16 91.3 218 35.8
Thhalv10019607m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 9.3e-16 89.0 389 29.8
A09p10550 Brassica napus HOM05D008189 ORTHO05D012600 3.5e-15 87.0 134 40.3
BcaC07g40348 Brassica carinata HOM05D008189 ORTHO05D027403 4.6e-15 86.7 124 45.2
BraA03t10758Z Brassica rapa HOM05D008189 ORTHO05D020139 1.0e-14 85.5 244 32.8
A08p18660 Brassica napus HOM05D008189 ORTHO05D020139 2.3e-14 84.3 247 34.0
Thhalv10026798m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 5.1e-14 83.2 420 28.6
Thhalv10029211m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.1e-13 82.0 368 27.7
BcaB05g22941 Brassica carinata HOM05D008189 ORTHO05D095938 1.5e-13 81.6 102 52.9
BraA07t29288Z Brassica rapa HOM05D008189 ORTHO05D016609 3.3e-13 80.5 109 46.8
C02p07890 Brassica napus HOM05D008189 ORTHO05D020139 4.3e-13 80.1 75 58.7
Thhalv10024110m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 4.3e-13 80.1 210 36.7
AL5G27290 Arabidopsis lyrata HOM05D008189 ORTHO05D016609 5.6e-13 79.7 197 38.1
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 2.1e-12 77.8 36 91.7
Thhalv10006382m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.8e-12 77.4 425 27.8
AL1G43970 Arabidopsis lyrata HOM05D008189 ORTHO05D012600 3.6e-12 77.0 72 63.9
AT2G07760 Arabidopsis thaliana HOM05D000848 ORTHO05D003342 1.4e-11 75.1 424 25.7
BolC4t23783H Brassica oleracea HOM05D008189 ORTHO05D027824 1.8e-11 74.7 66 57.6
BcaB04g21131 Brassica carinata HOM05D000493 ORTHO05D001638 4.0e-11 73.6 82 46.3
BcaC06g33084 Brassica carinata HOM05D008189 ORTHO05D016609 6.9e-11 72.8 94 45.7
Thhalv10019718m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.0e-10 71.2 473 25.8
BcaC03g14505 Brassica carinata HOM05D008189 ORTHO05D018627 3.4e-10 70.5 67 58.2
C04p18710 Brassica napus HOM05D000848 ORTHO05D003342 5.8e-10 69.7 212 34.4
BolC3t13710H Brassica oleracea HOM05D008189 ORTHO05D012600 5.8e-10 69.7 94 41.5
BraA09t37806Z Brassica rapa HOM05D008189 ORTHO05D018627 5.8e-10 69.7 111 40.5
BolC2t07668H Brassica oleracea HOM05D000848 ORTHO05D003342 7.6e-10 69.3 392 27.0
A09p21960 Brassica napus HOM05D008189 ORTHO05D018627 1.3e-09 68.6 128 37.5
Thhalv10016371m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.7e-09 68.2 174 37.9
Carub.0001s1624 Capsella rubella HOM05D000848 ORTHO05D003342 6.4e-09 66.2 128 35.2
Thhalv10005348m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.1e-08 65.5 367 28.6
Carub.0002s1565 Capsella rubella HOM05D000848 ORTHO05D003342 5.4e-08 63.2 126 34.9
Carub.0007s3131 Capsella rubella HOM05D000848 ORTHO05D003342 1.6e-07 61.6 375 26.4
AL6G40690 Arabidopsis lyrata HOM05D000848 ORTHO05D003342 2.1e-07 61.2 67 43.3
C02p19430 Brassica napus HOM05D008189 ORTHO05D018627 2.7e-07 60.8 96 42.7
BolC2t08078H Brassica oleracea HOM05D008189 ORTHO05D018627 2.7e-07 60.8 96 42.7
BolC9t55179H Brassica oleracea HOM05D000848 ORTHO05D003342 2.7e-07 60.8 35 71.4
Thhalv10017861m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.7e-07 60.8 414 23.9
A03p29750 Brassica napus HOM05D000848 ORTHO05D003342 3.5e-07 60.5 33 75.8
C01p15420 Brassica napus HOM05D000848 ORTHO05D003342 3.5e-07 60.5 375 26.4
BolC1t01496H Brassica oleracea HOM05D000848 ORTHO05D003342 3.5e-07 60.5 368 26.6
C01p00830 Brassica napus HOM05D000848 ORTHO05D021910 6.0e-07 59.7 159 30.8
BolC8t52060H Brassica oleracea HOM05D000848 ORTHO05D003342 6.0e-07 59.7 159 30.8
BolC7t45916H Brassica oleracea HOM05D001263 ORTHO05D001120 1.3e-06 58.5 132 31.1
C09p22620 Brassica napus HOM05D000848 ORTHO05D003342 2.3e-06 57.8 33 72.7
C07p54300 Brassica napus HOM05D001263 ORTHO05D001120 3.0e-06 57.4 132 29.5
BcaB02g08198 Brassica carinata HOM05D000848 ORTHO05D003342 3.9e-06 57.0 155 28.4
C05p31990 Brassica napus HOM05D015390 ORTHO05D018553 5.1e-06 56.6 104 37.5
BcaB05g22045 Brassica carinata HOM05D008189 ORTHO05D012600 6.7e-06 56.2 60 46.7
BcaB07g31990 Brassica carinata HOM05D008189 ORTHO05D090838 8.7e-06 55.8 84 41.7
C01p38710 Brassica napus HOM05D000848 ORTHO05D003342 8.7e-06 55.8 176 27.3


User provided reference genes

Program Settings