Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36732 Brassica carinata HOM05D009418 ORTHO05D011792 4.3e-62 241.1 120 100.0
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 6.9e-44 180.6 120 75.0
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 2.5e-41 172.2 119 71.4
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.1e-36 156.8 120 67.5
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 1.8e-36 156.0 119 68.1
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 1.2e-35 153.3 119 67.2
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 2.6e-35 152.1 119 67.2
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 2.9e-34 148.7 119 66.4
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.9e-33 146.0 120 66.7
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 3.2e-33 145.2 119 65.5
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 5.5e-33 144.4 119 67.2
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 1.2e-32 143.3 119 64.7
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 4.4e-30 134.8 110 68.2
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 1.6e-27 126.3 120 59.2
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 2.1e-24 115.9 116 54.3
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 3.0e-23 112.1 124 49.2
BcaC08g47159 Brassica carinata HOM05D009418 ORTHO05D090899 3.7e-21 105.1 71 73.2
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 1.0e-18 97.1 113 47.8
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 1.0e-18 97.1 113 47.8
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 3.8e-18 95.1 119 43.7
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 4.2e-17 91.7 113 46.0
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 5.5e-17 91.3 110 46.4
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 9.4e-17 90.5 107 47.7
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 9.4e-17 90.5 107 47.7
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.0e-14 82.8 104 42.3
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 2.0e-14 82.8 104 42.3
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 2.0e-14 82.8 104 42.3
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 2.0e-14 82.8 106 43.4
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 3.4e-14 82.0 78 53.8
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 3.4e-14 82.0 104 42.3
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 4.4e-14 81.6 104 42.3
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 4.4e-14 81.6 104 42.3
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.3e-13 80.1 106 44.3
A03p68050 Brassica napus HOM05D009418 ORTHO05D027366 4.8e-13 78.2 106 40.6
BraA01t02667Z Brassica rapa HOM05D009418 ORTHO05D027366 4.8e-13 78.2 106 40.6
BcaB07g33121 Brassica carinata HOM05D009418 ORTHO05D027366 1.4e-12 76.6 77 50.6
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 1.8e-12 76.3 105 42.9
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 2.4e-12 75.9 105 42.9
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 2.4e-12 75.9 101 43.6
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 4.1e-12 75.1 105 41.9
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 5.4e-12 74.7 102 42.2
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 5.4e-12 74.7 102 42.2
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.2e-11 73.6 102 41.2
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 1.6e-11 73.2 102 40.2
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 7.7e-11 70.9 121 38.0
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 2.9e-10 68.9 110 38.2
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 3.8e-10 68.6 76 44.7
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 5.0e-10 68.2 102 39.2
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 5.0e-10 68.2 77 42.9
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 5.0e-10 68.2 77 42.9
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.9e-09 66.2 123 35.0
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.5e-09 65.9 118 33.1
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 4.2e-09 65.1 92 40.2
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 4.2e-09 65.1 92 40.2
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 5.5e-09 64.7 78 43.6
C07p13430 Brassica napus HOM05D008838 ORTHO05D027188 7.2e-09 64.3 122 35.2
BolC7t41838H Brassica oleracea HOM05D008838 ORTHO05D027188 7.2e-09 64.3 122 35.2
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 9.5e-09 63.9 74 40.5
BraA05t19813Z Brassica rapa HOM05D008838 ORTHO05D027188 1.2e-08 63.5 122 34.4
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.1e-08 62.8 74 40.5
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 6.1e-08 61.2 104 30.8
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 1.8e-07 59.7 97 30.9
BcaC07g39264 Brassica carinata HOM05D009418 ORTHO05D092116 1.8e-07 59.7 55 54.5
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.8e-07 59.7 127 36.2
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 4.0e-07 58.5 89 39.3
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 4.0e-07 58.5 83 37.3
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 6.8e-07 57.8 108 38.0
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 6.8e-07 57.8 108 38.0
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 1.2e-06 57.0 108 38.0
BcaB04g19900 Brassica carinata HOM05D009418 ORTHO05D011792 1.5e-06 56.6 37 70.3
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 1.5e-06 56.6 108 37.0
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.5e-06 56.6 103 32.0
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 1.5e-06 56.6 95 31.6
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.5e-06 56.6 109 36.7
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 1.5e-06 56.6 83 36.1
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-06 56.2 107 40.2
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.6e-06 55.8 75 38.7
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 5.7e-06 54.7 118 25.4
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 5.7e-06 54.7 118 25.4
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 5.7e-06 54.7 83 36.1
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 5.7e-06 54.7 107 35.5
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 5.7e-06 54.7 118 25.4
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 5.7e-06 54.7 83 36.1
BcaB05g23099 Brassica carinata HOM05D008838 ORTHO05D017574 7.5e-06 54.3 62 46.8
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 7.5e-06 54.3 109 37.6
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 7.5e-06 54.3 109 38.5
BcaC06g35569 Brassica carinata HOM05D008838 ORTHO05D027188 9.8e-06 53.9 118 32.2
BolC5t33635H Brassica oleracea HOM05D008838 ORTHO05D017578 9.8e-06 53.9 74 43.2


User provided reference genes

Program Settings