Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 1.0e-99 366.7 178 100.0
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 6.4e-94 347.4 173 96.0
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 1.7e-91 339.3 178 90.4
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 5.0e-91 337.8 178 90.4
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 2.8e-89 332.0 175 92.0
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.8e-89 332.0 175 92.0
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 4.7e-89 331.3 165 97.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.3e-88 328.9 165 96.4
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 8.9e-88 327.0 177 87.6
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 3.4e-87 325.1 178 86.5
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 4.4e-87 324.7 178 86.5
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 4.9e-86 321.2 178 87.1
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 6.4e-86 320.9 179 85.5
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 8.3e-86 320.5 178 86.0
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 1.1e-85 320.1 169 88.8
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 1.1e-85 320.1 177 87.0
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 2.4e-85 318.9 178 83.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 3.2e-85 318.5 175 86.9
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 5.4e-85 317.8 178 84.3
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 3.3e-82 308.5 175 84.0
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 4.3e-82 308.1 176 81.2
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 2.9e-78 295.4 176 77.3
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 3.7e-78 295.0 170 78.2
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 3.7e-78 295.0 167 80.8
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 3.7e-78 295.0 167 80.8
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 1.4e-77 293.1 170 76.5
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 1.4e-77 293.1 174 77.0
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 2.4e-77 292.4 174 77.6
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 3.2e-77 292.0 175 77.1
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 4.1e-77 291.6 174 75.9
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 7.1e-77 290.8 169 75.1
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 9.2e-77 290.4 174 77.0
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 9.2e-77 290.4 177 74.0
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 1.2e-76 290.0 179 78.2
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 1.6e-76 289.7 168 76.2
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 2.1e-76 289.3 173 76.9
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 2.1e-76 289.3 171 74.9
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 2.7e-76 288.9 172 77.9
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 2.7e-76 288.9 187 73.3
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 2.7e-76 288.9 169 75.7
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.5e-76 288.5 174 75.9
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 4.6e-76 288.1 169 78.1
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 4.6e-76 288.1 169 74.6
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 6.0e-76 287.7 166 76.5
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.0e-75 287.0 177 75.1
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.7e-75 286.2 174 74.7
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 2.3e-75 285.8 166 75.9
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 2.3e-75 285.8 177 72.3
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 3.0e-75 285.4 168 76.2
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 3.0e-75 285.4 169 75.1
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 3.0e-75 285.4 166 76.5
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 3.0e-75 285.4 166 76.5
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 3.9e-75 285.0 159 85.5
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 5.1e-75 284.6 175 74.9
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 6.6e-75 284.3 166 77.1
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 6.6e-75 284.3 168 74.4
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 8.6e-75 283.9 171 73.7
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 1.1e-74 283.5 169 77.5
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 1.5e-74 283.1 166 77.1
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 3.3e-74 282.0 175 75.4
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 3.3e-74 282.0 174 73.6
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 7.3e-74 280.8 168 75.6
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 7.3e-74 280.8 176 74.4
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 7.3e-74 280.8 172 74.4
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 7.3e-74 280.8 168 75.6
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 7.3e-74 280.8 168 74.4
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 7.3e-74 280.8 174 73.0
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 9.5e-74 280.4 166 74.7
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 9.5e-74 280.4 168 76.2
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 1.2e-73 280.0 168 75.0
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 1.2e-73 280.0 168 75.0
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 1.2e-73 280.0 168 74.4
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 1.6e-73 279.6 175 71.4
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 2.8e-73 278.9 174 71.8
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 4.7e-73 278.1 174 73.0
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 4.7e-73 278.1 174 73.0
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 6.2e-73 277.7 167 76.0
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 8.1e-73 277.3 172 74.4
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 1.1e-72 276.9 166 74.1
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.1e-72 276.9 168 75.6
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.8e-72 276.2 168 74.4
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.8e-72 276.2 169 74.6
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 2.3e-72 275.8 174 73.0
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 3.1e-72 275.4 168 73.8
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 5.2e-72 274.6 168 74.4
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 6.8e-72 274.2 168 73.2
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 6.8e-72 274.2 174 71.3
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 8.9e-72 273.9 169 73.4
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 1.2e-71 273.5 170 74.1
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.5e-71 273.1 168 72.6
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 2.6e-71 272.3 168 73.8
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.6e-71 272.3 168 73.8
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 2.6e-71 272.3 167 73.7
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 4.4e-71 271.6 159 77.4
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.4e-71 271.6 166 74.1
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 4.4e-71 271.6 168 73.8
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 4.4e-71 271.6 168 73.8
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 5.8e-71 271.2 167 74.3
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 9.9e-71 270.4 168 73.2
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 167 71.9
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 1.7e-70 269.6 169 75.1
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 1.7e-70 269.6 170 73.5
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.7e-70 269.6 207 63.3
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 2.2e-70 269.2 167 71.9
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 2.9e-70 268.9 173 73.4
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.8e-70 268.5 168 73.2
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 6.4e-70 267.7 170 71.8
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 8.4e-70 267.3 170 72.4
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 1.1e-69 266.9 172 70.9
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 4.1e-69 265.0 163 78.5
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.2e-68 263.5 152 77.6
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 2.7e-68 262.3 161 73.3
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 3.5e-68 261.9 170 68.8
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 6.0e-68 261.2 164 73.8
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 7.8e-68 260.8 167 70.1
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 1.0e-67 260.4 170 70.6
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 1.3e-67 260.0 167 70.1
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 3.0e-67 258.8 170 69.4
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 8.6e-67 257.3 170 70.0
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 1.9e-66 256.1 169 66.9
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 2.1e-65 252.7 172 66.9
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.8e-65 252.3 235 54.5
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 3.6e-65 251.9 174 67.2
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 5.2e-64 248.1 174 65.5
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 7.6e-63 244.2 163 68.7
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 3.5e-60 235.3 165 66.7
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 6.0e-60 234.6 168 64.9
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 5.1e-59 231.5 180 62.2
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 6.6e-59 231.1 166 65.1
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 2.5e-58 229.2 173 62.4
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 4.8e-57 224.9 169 63.9
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 6.2e-57 224.6 172 61.0
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 4.9e-54 214.9 166 57.8
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 6.4e-54 214.5 165 58.2
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 6.4e-54 214.5 169 59.2
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 2.9e-46 189.1 178 52.8
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.9e-45 186.4 107 77.6
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.6e-44 183.3 122 69.7
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 6.7e-43 177.9 109 74.3
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.3e-42 175.6 111 69.4
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.8e-41 172.6 106 73.6
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 2.4e-40 169.5 167 52.7
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 4.0e-40 168.7 101 74.3
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 2.0e-39 166.4 101 72.3
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.3e-38 163.7 85 89.4
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 6.5e-38 161.4 103 74.8
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 8.4e-38 161.0 101 71.3
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 5.5e-37 158.3 112 67.0
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.0e-35 154.1 173 48.6
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 3.0e-35 152.5 108 63.9
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 3.0e-35 152.5 108 63.9
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 3.8e-30 135.6 172 47.1
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 4.8e-25 118.6 157 36.9
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.4e-24 116.3 73 69.9
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 3.1e-24 115.9 121 51.2
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 3.2e-21 105.9 137 47.4
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 1.1e-18 97.4 180 30.0
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.6e-18 96.3 63 68.3
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 1.7e-17 93.6 67 64.2
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 3.2e-13 79.3 79 48.1
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 7.2e-13 78.2 64 54.7
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.2e-12 77.4 66 54.5
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 8.8e-11 71.2 65 56.9
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 3.7e-09 65.9 35 82.9
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 6.3e-09 65.1 48 66.7


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