Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36192 Brassica carinata HOM05D012312 ORTHO05D012026 3.7e-42 174.5 89 100.0
BolC9t57912H Brassica oleracea HOM05D012312 ORTHO05D012026 8.5e-39 163.3 92 93.5
BraA10t43663Z Brassica rapa HOM05D012312 ORTHO05D012026 1.9e-38 162.2 92 92.4
Thhalv10015911m.g Eutrema salsugineum HOM05D012312 ORTHO05D012026 5.0e-31 137.5 89 83.1
AT5G58570 Arabidopsis thaliana HOM05D012312 ORTHO05D012026 4.2e-30 134.4 87 81.6
Sp6g20260 Schrenkiella parvula HOM05D012312 ORTHO05D012026 2.6e-27 125.2 81 75.3
Carub.0008s1917 Capsella rubella HOM05D012312 ORTHO05D012026 5.0e-23 110.9 81 74.1
CARHR272400 Cardamine hirsuta HOM05D012312 ORTHO05D012026 3.2e-22 108.2 88 70.5
Aa31LG11G330 Aethionema arabicum HOM05D012312 ORTHO05D012026 1.5e-19 99.4 87 64.4
Aa31LG11G340 Aethionema arabicum HOM05D012312 ORTHO05D012026 1.5e-19 99.4 87 64.4
MD11G1066400 Malus domestica HOM05D016645 ORTHO05D012026 2.7e-08 62.0 71 43.7
Ciclev10029610m.g Citrus clementina HOM05D012312 ORTHO05D012026 2.3e-07 58.9 69 49.3
Lj6g0009888 Lotus japonicus HOM05D021466 ORTHO05D012026 2.3e-07 58.9 79 32.9
Phvul.006G070900 Phaseolus vulgaris HOM05D021466 ORTHO05D012026 2.9e-07 58.5 70 34.3
Cfa011737 Carpinus fangiana HOM05D012991 ORTHO05D012026 3.9e-07 58.2 74 41.9
VMungo0540G0070 Vigna mungo HOM05D021466 ORTHO05D012026 3.9e-07 58.2 70 32.9
Sabra09G0056600 Salix brachista HOM05D012312 ORTHO05D012026 1.5e-06 56.2 57 45.6
Prupe.6G052800 Prunus persica HOM05D016645 ORTHO05D020718 3.3e-06 55.1 61 42.6
QL01p039358 Quercus lobata HOM05D012991 ORTHO05D015212 7.3e-06 53.9 43 53.5
Sabra16G0173400 Salix brachista HOM05D012312 ORTHO05D012026 9.5e-06 53.5 48 52.1


User provided reference genes

Program Settings