Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36150 Brassica carinata HOM05D001147 ORTHO05D000823 4.3e-116 421.4 219 100.0
BolC9t57824H Brassica oleracea HOM05D001147 ORTHO05D000823 3.2e-103 378.6 216 91.7
BcaC04g19923 Brassica carinata HOM05D001147 ORTHO05D000823 2.7e-102 375.6 216 91.2
A10p15210 Brassica napus HOM05D001147 ORTHO05D000823 6.0e-102 374.4 216 90.7
C09p49730 Brassica napus HOM05D001147 ORTHO05D000823 1.8e-98 362.8 210 90.5
BraA10t43604Z Brassica rapa HOM05D001147 ORTHO05D000823 1.2e-97 360.1 210 90.0
Thhalv10013794m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 4.8e-83 311.6 233 75.5
Sp6g19520 Schrenkiella parvula HOM05D001147 ORTHO05D000823 1.8e-82 309.7 233 76.0
AL8G33880 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 3.2e-79 298.9 235 74.0
AT5G57830 Arabidopsis thaliana HOM05D001147 ORTHO05D000823 3.0e-77 292.4 237 73.4
Carub.0008s1836 Capsella rubella HOM05D001147 ORTHO05D000823 3.6e-75 285.4 239 71.1
BcaB05g22378 Brassica carinata HOM05D001147 ORTHO05D000823 4.8e-75 285.0 231 70.6
CARHR271570 Cardamine hirsuta HOM05D001147 ORTHO05D000823 4.0e-74 282.0 237 72.2
BraA02t05890Z Brassica rapa HOM05D001147 ORTHO05D000823 2.0e-73 279.6 228 70.2
BolC2t07500H Brassica oleracea HOM05D001147 ORTHO05D000823 9.9e-73 277.3 226 69.5
A02p08160 Brassica napus HOM05D001147 ORTHO05D000823 4.9e-72 275.0 226 69.9
C02p13810 Brassica napus HOM05D001147 ORTHO05D000823 7.4e-68 261.2 217 69.1
BolC3t13916H Brassica oleracea HOM05D001147 ORTHO05D000823 5.1e-61 238.4 205 68.8
Aa31LG3G13670 Aethionema arabicum HOM05D001147 ORTHO05D000823 8.2e-59 231.1 240 57.9
BraA03t10570Z Brassica rapa HOM05D001147 ORTHO05D000823 2.6e-57 226.1 205 65.9
C03p14740 Brassica napus HOM05D001147 ORTHO05D000823 1.3e-56 223.8 200 67.0
A03p12540 Brassica napus HOM05D001147 ORTHO05D000823 8.7e-53 211.1 200 64.0
THA.LOC104813537 Tarenaya hassleriana HOM05D001147 ORTHO05D000823 1.5e-49 200.3 231 53.2
Cpa.g.sc46.192 Carica papaya HOM05D001147 ORTHO05D000823 2.4e-18 96.7 278 29.9
GSVIVG01023657001 Vitis vinifera HOM05D001147 ORTHO05D000823 1.2e-12 77.8 216 34.3
AT4G30830 Arabidopsis thaliana HOM05D001147 ORTHO05D000823 5.4e-10 68.9 214 29.4
A03p12560 Brassica napus HOM05D001147 ORTHO05D000823 1.3e-08 64.3 118 40.7
BraA03t10571Z Brassica rapa HOM05D001147 ORTHO05D000823 1.3e-08 64.3 118 40.7
Cfa020794 Carpinus fangiana HOM05D001147 ORTHO05D000823 1.3e-08 64.3 259 27.8
Sp7g28710 Schrenkiella parvula HOM05D001147 ORTHO05D000823 2.3e-08 63.5 202 29.7
CARHR238680 Cardamine hirsuta HOM05D001147 ORTHO05D000823 2.9e-08 63.2 206 28.6
Carub.0007s0973 Capsella rubella HOM05D001147 ORTHO05D000823 5.0e-08 62.4 222 29.3
PGR102G2166 Punica granatum HOM05D001147 ORTHO05D000823 1.9e-07 60.5 254 26.8
AL7G21290 Arabidopsis lyrata HOM05D001147 ORTHO05D000823 3.3e-07 59.7 217 27.6
BcaNung02737 Brassica carinata HOM05D001147 ORTHO05D000823 3.3e-07 59.7 202 27.7
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 3.3e-07 59.7 198 27.3
BraA03t15076Z Brassica rapa HOM05D001147 ORTHO05D000823 4.3e-07 59.3 198 26.8
Thhalv10025538m.g Eutrema salsugineum HOM05D001147 ORTHO05D000823 7.3e-07 58.5 203 29.6
Potri.018G103500 Populus trichocarpa HOM05D001147 ORTHO05D000823 2.1e-06 57.0 293 25.9
Sed0026266 Sechium edule HOM05D001147 ORTHO05D000823 2.1e-06 57.0 62 50.0
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 8.0e-06 55.1 205 25.9


User provided reference genes

Program Settings