Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36104 Brassica carinata HOM05D001798 ORTHO05D005040 1.4e-66 256.1 131 100.0
Sp6g19210 Schrenkiella parvula HOM05D001798 ORTHO05D005040 3.1e-61 238.4 132 93.9
Thhalv10015454m.g Eutrema salsugineum HOM05D001798 ORTHO05D005040 5.2e-61 237.7 132 93.9
BcaC03g14152 Brassica carinata HOM05D001798 ORTHO05D005040 2.1e-57 225.7 132 91.7
A02p08470 Brassica napus HOM05D001798 ORTHO05D005040 2.7e-57 225.3 132 91.7
BraA02t05918Z Brassica rapa HOM05D001798 ORTHO05D005040 2.7e-57 225.3 132 91.7
C02p14230 Brassica napus HOM05D001798 ORTHO05D005040 1.0e-56 223.4 132 90.9
BolC2t07547H Brassica oleracea HOM05D001798 ORTHO05D005040 2.3e-56 222.2 130 91.5
AT5G57510 Arabidopsis thaliana HOM05D001798 ORTHO05D005040 9.5e-55 216.9 132 88.6
BcaB05g22348 Brassica carinata HOM05D001798 ORTHO05D005040 1.1e-53 213.4 131 87.0
Carub.0008s1801 Capsella rubella HOM05D001798 ORTHO05D005040 1.1e-53 213.4 132 87.9
CARHR271290 Cardamine hirsuta HOM05D001798 ORTHO05D005040 1.3e-51 206.5 133 84.2
AL8G33450 Arabidopsis lyrata HOM05D001798 ORTHO05D005040 4.9e-51 204.5 132 85.6
AL8G33510 Arabidopsis lyrata HOM05D001798 ORTHO05D005040 4.9e-51 204.5 132 85.6
Aa31LG3G13380 Aethionema arabicum HOM05D001798 ORTHO05D005040 7.6e-44 180.6 133 75.2
THA.LOC104811795 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 1.9e-42 176.0 137 73.7
BcaC04g19961 Brassica carinata HOM05D001798 ORTHO05D005040 1.6e-38 162.9 92 92.4
BolC9t57787H Brassica oleracea HOM05D001798 ORTHO05D005040 1.6e-38 162.9 92 92.4
THA.LOC104817796 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 2.8e-38 162.2 122 74.6
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 4.2e-26 121.7 123 56.9
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 5.5e-26 121.3 126 56.3
Cpa.g.sc95.60 Carica papaya HOM05D001798 ORTHO05D005040 3.5e-25 118.6 132 56.8
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 3.5e-25 118.6 117 54.7
Sed0020469 Sechium edule HOM05D001798 ORTHO05D005040 1.0e-24 117.1 123 56.1
Duzib150G1419 Durio zibethinus HOM05D001798 ORTHO05D005040 1.3e-24 116.7 124 57.3
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 1.8e-24 116.3 126 54.8
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 2.3e-24 115.9 119 57.1
Thecc.09G171700 Theobroma cacao HOM05D001798 ORTHO05D005040 6.7e-24 114.4 124 56.5
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 1.1e-23 113.6 118 53.4
QL02p097572 Quercus lobata HOM05D001798 ORTHO05D005040 2.5e-23 112.5 135 52.6
TAR383G0769 Trochodendron aralioides HOM05D001798 ORTHO05D005040 2.5e-23 112.5 123 55.3
QL02p097578 Quercus lobata HOM05D001798 ORTHO05D005040 5.6e-23 111.3 133 50.4
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 7.4e-23 110.9 126 54.8
Atru.chr7.661 Acer truncatum HOM05D001798 ORTHO05D005040 3.7e-22 108.6 124 55.6
CiPaw.07G191500 Carya illinoinensis HOM05D001798 ORTHO05D005040 3.7e-22 108.6 128 53.9
Gorai.004G100700 Gossypium raimondii HOM05D001798 ORTHO05D005040 4.8e-22 108.2 123 54.5
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 6.2e-22 107.8 131 49.6
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 8.1e-22 107.5 129 53.5
Gohir.A08G085900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 8.1e-22 107.5 123 54.5
Gohir.D08G094900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.4e-21 106.7 123 54.5
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 1.8e-21 106.3 119 51.3
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 4.0e-21 105.1 127 49.6
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 4.0e-21 105.1 128 51.6
Hma1.2p1_2478F.1_g322950 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 6.9e-21 104.4 123 52.8
MSTRG.19701 Avicennia marina HOM05D001798 ORTHO05D005040 9.0e-21 104.0 122 49.2
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 9.0e-21 104.0 128 51.6
Manes.14G151300 Manihot esculenta HOM05D001798 ORTHO05D005040 9.0e-21 104.0 127 53.5
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.2e-20 103.6 121 51.2
Hma1.2p1_1646F.1_g295510 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 1.2e-20 103.6 123 52.8
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 1.5e-20 103.2 116 50.9
SalBow1G2776 Salvia bowleyana HOM05D001798 ORTHO05D005040 2.0e-20 102.8 111 50.5
Ciclev10009891m.g Citrus clementina HOM05D001798 ORTHO05D005040 4.5e-20 101.7 134 47.0
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 5.8e-20 101.3 125 50.4
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 7.6e-20 100.9 117 51.3
Potri.018G094100 Populus trichocarpa HOM05D001798 ORTHO05D005040 7.6e-20 100.9 125 52.8
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 7.6e-20 100.9 128 51.6
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.3e-19 100.1 122 50.0
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 1.3e-19 100.1 123 46.3
RcHm_v2.0_Chr4g0402701 Rosa chinensis HOM05D001798 ORTHO05D005040 1.3e-19 100.1 131 53.4
Lalb_Chr12g0199341 Lupinus albus HOM05D001798 ORTHO05D005040 1.7e-19 99.8 125 49.6
RcHm_v2.0_Chr4g0402691 Rosa chinensis HOM05D001798 ORTHO05D005040 2.9e-19 99.0 132 50.8
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 2.9e-19 99.0 122 50.8
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 3.8e-19 98.6 125 52.0
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 6.5e-19 97.8 122 49.2
SGA_v2.0_scaffold301G47805 Striga asiatica HOM05D000485 ORTHO05D005040 6.5e-19 97.8 117 51.3
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 8.4e-19 97.4 122 49.2
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 8.4e-19 97.4 122 49.2
TPR.G5377 Trifolium pratense HOM05D001798 ORTHO05D005040 1.4e-18 96.7 117 48.7
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 1.9e-18 96.3 126 50.0
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 4.2e-18 95.1 128 46.1
Aqoxy7G03082 Aquilegia oxysepala HOM05D001798 ORTHO05D005040 5.5e-18 94.7 127 47.2
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 5.5e-18 94.7 125 51.2
Ca_21215_v3 Cicer arietinum L. HOM05D001798 ORTHO05D005040 7.1e-18 94.4 116 44.8
Eucgr.C00167 Eucalyptus grandis HOM05D001798 ORTHO05D005040 9.3e-18 94.0 126 47.6
Sabra18G0080900 Salix brachista HOM05D001798 ORTHO05D005040 9.3e-18 94.0 116 50.9
TWI34G1338 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 1.6e-17 93.2 122 47.5
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 2.7e-17 92.4 120 50.0
Nn2g12701 Nelumbo nucifera HOM05D001798 ORTHO05D005040 2.7e-17 92.4 113 46.9
Migut.J01450 Erythranthe guttata HOM05D001798 ORTHO05D005040 3.5e-17 92.0 123 44.7
PGR142G4397 Punica granatum HOM05D001798 ORTHO05D005040 6.0e-17 91.3 124 49.2
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 1.0e-16 90.5 114 50.0
Glyma.17G064300 Glycine max HOM05D001798 ORTHO05D005040 1.8e-16 89.7 129 46.5
Glyma.13G095700 Glycine max HOM05D001798 ORTHO05D005040 2.3e-16 89.4 121 47.1
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 6.7e-16 87.8 98 57.1
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 8.7e-16 87.4 114 48.2
SalBow6G3226 Salvia bowleyana HOM05D001798 ORTHO05D005040 8.7e-16 87.4 111 48.6
SalBow6G3242 Salvia bowleyana HOM05D001798 ORTHO05D005040 8.7e-16 87.4 111 48.6
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 1.5e-15 86.7 119 43.7
CAN.G321.14 Capsicum annuum HOM05D001798 ORTHO05D005040 3.3e-15 85.5 134 41.0
VMungo1215G0796 Vigna mungo HOM05D001798 ORTHO05D005040 4.3e-15 85.1 118 48.3
Psat4g011600 Pisum sativum HOM05D001798 ORTHO05D005040 9.6e-15 84.0 112 44.6
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.3e-14 83.6 97 53.6
MBI16_g35924_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 1.3e-14 83.6 113 45.1
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 1.6e-14 83.2 122 44.3
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 1.6e-14 83.2 123 43.1
Rhsim01G0006100 Rhododendron simsii HOM05D001798 ORTHO05D005040 1.6e-14 83.2 97 49.5
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 2.1e-14 82.8 108 46.3
CiPaw.08G037100 Carya illinoinensis HOM05D001798 ORTHO05D005040 2.8e-14 82.4 129 45.0
Eucgr.C02285 Eucalyptus grandis HOM05D001798 ORTHO05D005040 2.8e-14 82.4 117 39.3
Eucgr.C02286 Eucalyptus grandis HOM05D001798 ORTHO05D005040 2.8e-14 82.4 121 39.7
MBI16_g35923_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 3.7e-14 82.0 113 44.2
PSO349G0296 Papaver somniferum HOM05D001798 ORTHO05D005040 6.3e-14 81.3 132 41.7
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 8.2e-14 80.9 126 44.4
AUR62020597 Chenopodium quinoa HOM05D001798 ORTHO05D005040 1.1e-13 80.5 136 39.0
Phvul.003G146800 Phaseolus vulgaris HOM05D001798 ORTHO05D005040 1.4e-13 80.1 117 46.2
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.4e-13 80.1 131 43.5
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 2.4e-13 79.3 121 40.5
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 2.4e-13 79.3 119 44.5
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 2.4e-13 79.3 119 44.5
MBI16_g35927_MAGBIO Magnolia biondii HOM05D000772 ORTHO05D005040 3.1e-13 79.0 109 45.0
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 5.3e-13 78.2 115 45.2
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 5.3e-13 78.2 115 45.2
Haze_21745 Corylus avellana HOM05D001798 ORTHO05D005040 9.0e-13 77.4 116 44.0
AUR62009071 Chenopodium quinoa HOM05D001798 ORTHO05D005040 1.5e-12 76.6 138 39.1
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 1.5e-12 76.6 115 41.7
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.5e-12 76.6 121 39.7
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 2.6e-12 75.9 115 43.5
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 3.4e-12 75.5 115 41.7
RcHm_v2.0_Chr6g0305001 Rosa chinensis HOM05D001798 ORTHO05D005040 3.4e-12 75.5 123 37.4
Sabra06G0212200 Salix brachista HOM05D001798 ORTHO05D005040 3.4e-12 75.5 119 46.2
FAN20G2332 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.5e-12 75.1 120 39.2
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 5.9e-12 74.7 114 42.1
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 7.6e-12 74.3 123 38.2
FAN15G2712 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.3e-11 73.6 118 39.0
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.7e-11 73.2 124 42.7
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 2.2e-11 72.8 124 41.9
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 2.2e-11 72.8 112 42.9
MD15G1107700 Malus domestica HOM05D001798 ORTHO05D005040 2.2e-11 72.8 127 43.3
Prupe.1G460000 Prunus persica HOM05D001798 ORTHO05D005040 2.2e-11 72.8 118 39.0
CANSAT11G0905 Cannabis sativa HOM05D001798 ORTHO05D005040 2.9e-11 72.4 155 36.8
Sabra06G0211900 Salix brachista HOM05D001798 ORTHO05D005040 3.8e-11 72.0 120 44.2
HanXRQChr05g0137241 Helianthus annuus HOM05D001798 ORTHO05D005040 8.4e-11 70.9 134 35.8
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 1.1e-10 70.5 118 39.8
Sc01g0002270 Simmondsia chinensis HOM05D001798 ORTHO05D005040 1.1e-10 70.5 138 40.6
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.4e-10 70.1 114 36.8
Ah.11g043870 Amaranthus hybridus HOM05D001798 ORTHO05D005040 3.2e-10 68.9 119 37.0
Lsat_1_v5_gn_8_67120 Lactuca sativa HOM05D001798 ORTHO05D005040 3.2e-10 68.9 139 38.1
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 4.2e-10 68.6 129 40.3
AUR62022665 Chenopodium quinoa HOM05D001798 ORTHO05D005040 4.2e-10 68.6 121 39.7
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 4.2e-10 68.6 116 38.8
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 2.7e-09 65.9 128 40.6
CiPaw.07G212400 Carya illinoinensis HOM05D001798 ORTHO05D005040 2.7e-09 65.9 107 40.2
MD08G1128200 Malus domestica HOM05D001798 ORTHO05D005040 2.7e-09 65.9 131 36.6
Haze_21740 Corylus avellana HOM05D001798 ORTHO05D005040 3.5e-09 65.5 100 43.0
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 3.5e-09 65.5 70 52.9
ECA240G2061 Erigeron canadensis HOM05D001798 ORTHO05D005040 4.6e-09 65.1 129 36.4
ATR0580G067 Amborella trichopoda HOM05D001798 ORTHO05D005040 3.9e-08 62.0 110 39.1
HanXRQChr09g0254491 Helianthus annuus HOM05D001798 ORTHO05D005040 2.5e-07 59.3 135 32.6
EL10Ac2g03758 Beta vulgaris HOM05D001798 ORTHO05D005040 1.6e-06 56.6 142 36.6
Ah.05g179040 Amaranthus hybridus HOM05D001798 ORTHO05D005040 2.2e-06 56.2 165 30.9
HPP92_017412 Vanilla planifolia HOM05D001798 ORTHO05D005040 3.7e-06 55.5 43 58.1
MBI16_g35928_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 4.8e-06 55.1 82 41.5
HPP92_010486 Vanilla planifolia HOM05D001798 ORTHO05D005040 4.8e-06 55.1 158 31.0
PGSC0003DMG400026318 Solanum tuberosum HOM05D001798 ORTHO05D005040 6.3e-06 54.7 124 34.7


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