Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35949 Brassica carinata HOM05D007390 ORTHO05D009114 2.3e-87 326.6 351 100.0
BcaB08g35944 Brassica carinata HOM05D007390 ORTHO05D009114 3.9e-71 272.7 228 74.6
BcaC04g20197 Brassica carinata HOM05D007390 ORTHO05D009114 8.3e-37 158.7 119 100.0
C09p46770 Brassica napus HOM05D007390 ORTHO05D009114 8.3e-37 158.7 119 100.0
BolC9t57528H Brassica oleracea HOM05D007390 ORTHO05D009114 1.2e-35 154.8 119 98.3
A10p13050 Brassica napus HOM05D007390 ORTHO05D009114 1.6e-32 144.4 119 81.5
BraA10t43400Z Brassica rapa HOM05D007390 ORTHO05D009114 1.6e-32 144.4 119 81.5
CARHR269210 Cardamine hirsuta HOM05D007390 ORTHO05D009114 9.1e-28 128.6 121 72.7
AL8G31410 Arabidopsis lyrata HOM05D007390 ORTHO05D009114 5.4e-20 102.8 84 61.9
Thhalv10012614m.g Eutrema salsugineum HOM05D007390 ORTHO05D009114 1.2e-19 101.7 83 62.7
RcHm_v2.0_Chr5g0076971 Rosa chinensis HOM05D007390 ORTHO05D009114 9.5e-17 92.0 58 65.5
Aqoxy4G00642 Aquilegia oxysepala HOM05D007390 ORTHO05D009114 1.2e-11 75.1 60 50.0
CsaV3_3G042310 Cucumis sativus L. HOM05D007390 ORTHO05D009114 6.0e-11 72.8 53 60.4
Cpa.g.sc959.2 Carica papaya HOM05D007390 ORTHO05D009114 1.3e-10 71.6 46 63.0
MELO3C009949.2 Cucumis melo HOM05D007390 ORTHO05D009114 1.3e-10 71.6 53 58.5
ClCG09G021340 Citrullus lanatus HOM05D007390 ORTHO05D009114 5.0e-10 69.7 57 52.6
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 1.5e-09 68.2 63 87.3
Medtr2g036080 Medicago truncatula HOM05D007390 ORTHO05D009114 2.5e-09 67.4 161 35.4
Psat1g149640 Pisum sativum HOM05D007390 ORTHO05D009114 2.5e-09 67.4 160 35.0
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 1.2e-06 58.5 65 78.5


User provided reference genes

Program Settings