Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 1.1e-87 326.6 172 100.0
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 1.9e-74 282.7 174 88.5
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 1.0e-72 276.9 173 85.0
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 1.6e-65 253.1 173 78.6
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 8.6e-64 247.3 173 78.0
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 1.9e-63 246.1 173 78.0
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 1.6e-62 243.0 173 77.5
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 1.1e-61 240.4 173 78.0
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 1.5e-60 236.5 173 75.7
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 9.9e-60 233.8 176 77.3
BolC9t57396H Brassica oleracea HOM05D010845 ORTHO05D002692 1.3e-59 233.4 142 88.7
C09p45220 Brassica napus HOM05D010845 ORTHO05D002692 6.4e-59 231.1 139 88.5
BraA10t43305Z Brassica rapa HOM05D010845 ORTHO05D002692 6.4e-59 231.1 170 75.3
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 1.1e-58 230.3 175 75.4
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 1.4e-58 229.9 175 76.6
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 3.5e-57 225.3 172 74.4
C02p16670 Brassica napus HOM05D010845 ORTHO05D002692 1.0e-40 170.6 141 71.6
Aa31LG3G10720 Aethionema arabicum HOM05D010845 ORTHO05D002692 9.4e-18 94.4 174 42.0
THA.LOC104813418 Tarenaya hassleriana HOM05D010845 ORTHO05D002692 6.1e-17 91.7 186 40.3
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 2.6e-15 86.3 191 38.2
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 4.5e-12 75.5 185 39.5
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 7.7e-12 74.7 189 37.0
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.0e-11 74.3 191 37.7
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 1.7e-11 73.6 166 40.4
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.2e-11 73.2 196 37.2
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.9e-11 72.8 193 39.4
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.9e-11 72.8 168 35.1
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 2.9e-11 72.8 169 39.6
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 3.8e-11 72.4 180 33.9
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 5.0e-11 72.0 182 35.2
Gorai.013G163000 Gossypium raimondii HOM05D002846 ORTHO05D002692 6.5e-11 71.6 168 34.5
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 8.5e-11 71.2 172 36.0
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 8.5e-11 71.2 155 34.8
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.1e-10 70.9 188 36.7
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 1.9e-10 70.1 197 35.5
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.9e-10 70.1 168 36.9
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 1.9e-10 70.1 181 34.8
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.5e-10 69.7 186 36.0
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 3.2e-10 69.3 180 36.1
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 5.5e-10 68.6 182 34.6
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 5.5e-10 68.6 194 35.6
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 7.2e-10 68.2 172 37.2
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 9.4e-10 67.8 175 36.6
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.6e-09 67.0 193 36.8
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 1.6e-09 67.0 180 33.3
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 2.1e-09 66.6 189 32.8
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 2.7e-09 66.2 172 40.1
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 3.6e-09 65.9 189 32.8
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 3.6e-09 65.9 195 37.4
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 6.1e-09 65.1 177 30.5
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.1e-09 65.1 180 36.1
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 6.1e-09 65.1 186 33.3
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 6.1e-09 65.1 200 33.5
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 8.0e-09 64.7 206 35.4
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 1.0e-08 64.3 186 33.9
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.0e-08 64.3 206 32.5
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.8e-08 63.5 201 34.8
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 2.3e-08 63.2 165 38.2
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.3e-08 63.2 188 34.6
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 2.3e-08 63.2 163 38.7
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 2.3e-08 63.2 180 35.6
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 2.3e-08 63.2 184 36.4
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 2.3e-08 63.2 182 34.6
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 2.3e-08 63.2 182 36.3
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 3.0e-08 62.8 186 34.4
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 3.0e-08 62.8 159 37.1
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.9e-08 62.4 182 34.1
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 3.9e-08 62.4 189 33.3
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 5.2e-08 62.0 224 30.8
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 5.2e-08 62.0 196 34.7
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 6.7e-08 61.6 216 32.9
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.7e-08 61.6 169 33.7
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 6.7e-08 61.6 183 34.4
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 8.8e-08 61.2 169 35.5
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 8.8e-08 61.2 182 35.2
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 8.8e-08 61.2 161 34.2
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 8.8e-08 61.2 197 36.5
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 8.8e-08 61.2 160 36.2
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 1.1e-07 60.8 161 33.5
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 1.5e-07 60.5 181 33.7
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.0e-07 60.1 168 34.5
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.0e-07 60.1 176 37.5
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 2.6e-07 59.7 181 33.7
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 2.6e-07 59.7 176 31.2
HanXRQChr05g0159181 Helianthus annuus HOM05D002846 ORTHO05D002692 2.6e-07 59.7 163 33.1
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 2.6e-07 59.7 181 32.0
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 2.6e-07 59.7 173 34.1
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 3.3e-07 59.3 169 35.5
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 4.4e-07 58.9 182 33.5
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 4.4e-07 58.9 160 34.4
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 4.4e-07 58.9 172 32.6
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 9.7e-07 57.8 199 34.7
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 9.7e-07 57.8 189 31.7
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 1.3e-06 57.4 166 36.1
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 1.3e-06 57.4 181 33.1
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.3e-06 57.4 156 35.9
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 1.3e-06 57.4 170 32.4
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 1.7e-06 57.0 158 33.5
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 1.7e-06 57.0 180 33.3
Atru.chr2.3239 Acer truncatum HOM05D002846 ORTHO05D002692 2.2e-06 56.6 114 36.0
MSTRG.14152 Avicennia marina HOM05D002846 ORTHO05D002692 2.2e-06 56.6 169 30.2
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.2e-06 56.6 183 32.8
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 2.2e-06 56.6 179 34.1
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 2.2e-06 56.6 194 36.6
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 2.8e-06 56.2 201 27.9
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.8e-06 56.2 186 31.7
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.8e-06 56.2 163 35.6
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 3.7e-06 55.8 203 30.5
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 3.7e-06 55.8 170 35.3
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.7e-06 55.8 184 33.2
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 3.7e-06 55.8 190 33.2
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.7e-06 55.8 160 36.2
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 4.8e-06 55.5 186 35.5
FvH4_3g22010 Fragaria vesca HOM05D002846 ORTHO05D002692 4.8e-06 55.5 192 35.9
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 4.8e-06 55.5 187 34.2
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 6.3e-06 55.1 189 33.9
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 6.3e-06 55.1 166 33.7
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 8.2e-06 54.7 180 33.3
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 8.2e-06 54.7 174 32.8
Sed0000680 Sechium edule HOM05D002846 ORTHO05D002692 8.2e-06 54.7 175 31.4


User provided reference genes

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