Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-31 138.7 66 100.0
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-25 118.6 64 87.5
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-23 112.1 65 83.1
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 3.7e-23 110.9 65 81.5
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-22 108.2 65 80.0
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-19 98.2 65 75.4
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 2.5e-19 98.2 65 70.8
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-18 94.0 64 68.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-18 94.0 65 69.2
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 4.7e-18 94.0 65 69.2
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-18 93.6 65 64.6
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 6.1e-18 93.6 65 64.6
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 4.0e-17 90.9 65 63.1
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-17 90.5 54 81.5
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-16 87.8 65 63.1
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 4.4e-16 87.4 65 61.5
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 4.4e-16 87.4 66 63.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-16 86.3 65 60.0
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 9.8e-16 86.3 66 63.6
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 9.8e-16 86.3 66 63.6
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-15 85.9 66 63.6
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-15 85.9 66 63.6
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-15 85.1 66 63.6
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-15 85.1 66 63.6
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-15 85.1 66 63.6
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-15 85.1 66 63.6
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 2.2e-15 85.1 66 63.6
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-15 84.7 65 58.5
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-15 84.3 65 56.9
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-15 84.3 65 63.1
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-15 84.3 65 63.1
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-15 84.0 65 60.0
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 8.3e-15 83.2 66 62.1
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-14 82.0 66 62.1
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-14 82.0 66 62.1
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-14 81.6 66 62.1
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-14 81.6 64 62.5
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-14 81.6 66 62.1
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-14 81.6 66 62.1
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-14 81.3 66 62.1
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 3.1e-14 81.3 66 60.6
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-14 80.9 65 58.5
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-14 80.9 66 60.6
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-14 80.5 66 60.6
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-14 80.1 66 60.6
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 7.0e-14 80.1 66 60.6
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-14 79.7 66 60.6
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-13 77.4 59 64.4
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-13 77.4 51 70.6
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-13 77.0 65 52.3
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-12 76.3 66 57.6
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-12 74.7 59 61.0
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-11 70.5 66 53.0
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-10 69.3 66 50.0
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-10 68.2 66 53.0
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-10 67.8 64 46.9
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-08 61.6 64 43.8
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-08 61.2 64 42.2
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-08 60.8 58 44.8
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-08 60.5 64 42.2
BcaB05g23095 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-08 60.5 57 47.4
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-08 60.5 64 40.6
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-07 58.5 58 43.1
C03p75260 Brassica napus HOM05D017666 ORTHO05D042826 2.9e-07 58.2 53 58.5
C05p54280 Brassica napus HOM05D017666 ORTHO05D033272 2.9e-07 58.2 53 58.5
BolC3t19786H Brassica oleracea HOM05D017666 ORTHO05D042826 2.9e-07 58.2 53 58.5
BolC5t34095H Brassica oleracea HOM05D017666 ORTHO05D033272 2.9e-07 58.2 53 58.5
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 1.1e-06 56.2 55 54.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-06 55.5 64 37.5
BraA03t15418Z Brassica rapa HOM05D017666 ORTHO05D033272 1.9e-06 55.5 53 56.6
C09p43860 Brassica napus HOM05D017666 ORTHO05D003352 2.4e-06 55.1 53 56.6
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-06 54.7 44 52.3
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 7.0e-06 53.5 61 47.5
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 7.0e-06 53.5 61 47.5


User provided reference genes

Program Settings