Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 8.1e-160 567.0 281 100.0
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 5.4e-156 554.3 281 97.2
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 1.2e-155 553.1 281 96.8
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 4.6e-155 551.2 281 96.8
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 7.8e-155 550.4 281 96.1
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 7.8e-155 550.4 281 96.1
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 3.3e-153 545.0 281 95.4
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.2e-152 543.1 281 95.4
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 2.3e-151 538.9 281 94.0
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 5.2e-151 537.7 281 93.6
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.2e-150 536.6 283 94.3
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 3.4e-150 535.0 281 93.2
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.3e-149 533.1 282 94.0
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 7.1e-148 527.3 283 92.9
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 2.9e-141 505.4 282 89.4
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 8.4e-141 503.8 275 91.3
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.4e-132 476.5 281 83.3
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.8e-130 469.5 282 81.6
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 5.1e-130 468.0 282 81.6
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 5.1e-130 468.0 281 80.1
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 7.4e-129 464.2 283 81.3
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 7.4e-129 464.2 283 81.3
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 9.6e-129 463.8 288 80.6
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 1.6e-128 463.0 284 79.9
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 1.6e-128 463.0 284 79.9
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 2.1e-128 462.6 282 80.5
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 2.4e-127 459.1 283 80.2
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 3.1e-127 458.8 282 80.1
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 1.2e-126 456.8 284 80.6
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 7.6e-126 454.1 284 80.3
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 7.6e-126 454.1 284 80.3
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 1.3e-125 453.4 283 80.9
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 1.8e-122 443.0 275 80.0
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 4.9e-117 424.9 277 76.2
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 1.6e-107 393.3 281 67.6
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.5e-105 386.7 285 66.7
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 2.2e-104 382.9 278 67.6
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 1.1e-103 380.6 278 66.2
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 1.1e-103 380.6 287 66.2
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 1.1e-103 380.6 286 65.4
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 1.8e-103 379.8 281 66.2
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 6.9e-103 377.9 282 64.9
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 1.2e-102 377.1 281 65.8
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 4.5e-102 375.2 281 65.8
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 1.3e-101 373.6 283 63.3
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.3e-101 373.6 281 63.0
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 1.7e-101 373.2 286 66.8
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 2.2e-101 372.9 282 64.2
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 5.0e-101 371.7 281 64.8
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 5.0e-101 371.7 285 64.2
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 8.5e-101 370.9 285 64.6
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 2.5e-100 369.4 281 64.4
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 2.5e-100 369.4 283 62.5
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 9.4e-100 367.5 281 64.8
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 1.2e-99 367.1 277 65.0
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.6e-99 366.7 282 65.6
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 1.6e-99 366.7 284 65.1
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 1.6e-99 366.7 282 64.5
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 2.1e-99 366.3 284 62.7
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 2.1e-99 366.3 282 63.1
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 3.6e-99 365.5 281 63.7
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.6e-99 365.5 283 65.4
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 3.6e-99 365.5 277 65.3
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 3.6e-99 365.5 281 64.4
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 4.6e-99 365.2 278 64.0
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 4.6e-99 365.2 280 62.9
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 1.0e-98 364.0 278 62.9
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.4e-98 363.6 289 64.4
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 1.8e-98 363.2 281 62.6
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 1.8e-98 363.2 280 62.1
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 3.0e-98 362.5 282 63.8
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 3.0e-98 362.5 281 62.3
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 5.1e-98 361.7 287 62.0
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 8.8e-98 360.9 285 62.1
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 1.1e-97 360.5 283 62.9
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.5e-97 360.1 282 61.7
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 3.3e-97 359.0 282 61.3
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 5.7e-97 358.2 285 63.5
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 1.3e-96 357.1 282 61.3
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 1.7e-96 356.7 285 61.4
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.7e-96 356.7 284 62.0
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 2.2e-96 356.3 284 61.6
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 2.8e-96 355.9 288 61.1
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 4.8e-96 355.1 242 69.0
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 6.3e-96 354.8 282 62.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 6.3e-96 354.8 285 61.4
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 8.2e-96 354.4 281 62.3
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 8.2e-96 354.4 281 61.2
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 1.1e-95 354.0 279 62.0
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.8e-95 353.2 281 61.6
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 1.8e-95 353.2 275 64.4
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 3.1e-95 352.4 278 61.9
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 4.1e-95 352.1 281 61.9
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.3e-95 351.7 283 62.9
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 6.9e-95 351.3 242 67.8
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 1.2e-94 350.5 278 62.6
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.2e-94 350.5 283 62.5
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 2.0e-94 349.7 283 62.5
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 2.0e-94 349.7 283 61.8
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 2.6e-94 349.4 281 61.2
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 3.4e-94 349.0 288 59.4
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 4.5e-94 348.6 281 61.9
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 7.7e-94 347.8 285 58.6
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 7.7e-94 347.8 285 58.6
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 7.7e-94 347.8 282 61.3
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 1.0e-93 347.4 282 60.3
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 2.9e-93 345.9 281 59.8
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 3.8e-93 345.5 283 59.7
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 3.8e-93 345.5 284 58.8
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 8.5e-93 344.4 282 60.6
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 1.1e-92 344.0 285 60.4
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-92 343.2 283 59.0
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-92 343.2 283 59.0
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 2.5e-92 342.8 284 61.3
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 2.5e-92 342.8 283 60.4
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.2e-92 342.4 281 60.9
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 5.5e-92 341.7 281 58.7
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 9.4e-92 340.9 285 57.5
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 2.1e-91 339.7 281 60.1
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 2.1e-91 339.7 279 59.5
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 2.7e-91 339.3 281 61.2
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 2.7e-91 339.3 281 60.1
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 6.1e-91 338.2 311 54.7
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 7.9e-91 337.8 286 58.4
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 2.6e-89 332.8 280 58.9
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 5.7e-89 331.6 285 57.2
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 9.7e-89 330.9 281 58.7
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 4.1e-87 325.5 242 64.9
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 7.0e-87 324.7 282 57.8
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 7.0e-87 324.7 286 57.0
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.2e-86 323.9 304 54.3
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 4.5e-86 322.0 242 62.4
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 3.8e-85 318.9 282 56.7
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 8.5e-85 317.8 277 56.7
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 1.9e-84 316.6 277 57.4
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 1.2e-83 313.9 281 56.9
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.7e-83 312.8 281 55.2
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 4.7e-83 312.0 283 54.8
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 5.7e-81 305.1 281 57.3
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 5.7e-81 305.1 284 57.0
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 9.7e-81 304.3 246 59.8
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 2.2e-80 303.1 258 59.3
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 5.3e-79 298.5 283 52.3
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.9e-76 290.0 185 73.0
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 2.5e-76 289.7 242 57.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.2e-76 288.9 274 52.6
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 1.3e-72 277.3 283 50.5
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 5.4e-71 271.9 253 56.5
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 2.7e-70 269.6 138 93.5
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 1.0e-69 267.7 138 92.8
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 1.0e-69 267.7 138 92.8
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 7.2e-68 261.5 197 61.4
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 1.0e-66 257.7 246 49.2
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 3.1e-63 246.1 229 52.0
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 5.6e-60 235.3 240 46.2
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 3.4e-57 226.1 286 40.6
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 2.9e-56 223.0 186 57.5
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 2.8e-51 206.5 186 54.8
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 7.0e-47 191.8 164 55.5
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 7.8e-46 188.3 163 57.7
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.7e-45 187.2 166 58.4
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 2.5e-44 183.3 213 44.1
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.1e-43 180.3 251 44.6
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 4.7e-43 179.1 185 55.1
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 1.5e-41 174.1 113 75.2
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 5.4e-39 165.6 240 33.8
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.8e-26 124.0 74 82.4
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 7.3e-20 102.1 123 39.0
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 6.0e-14 82.4 189 31.2


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