Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35768 Brassica carinata HOM05D005857 ORTHO05D007193 1.8e-27 125.2 61 100.0
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 9.0e-16 86.3 44 95.5
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 9.0e-16 86.3 44 95.5
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 9.0e-16 86.3 44 95.5
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 7.7e-15 83.2 44 90.9
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 2.9e-14 81.3 44 90.9
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 6.5e-14 80.1 44 93.2
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 2.5e-13 78.2 44 90.9
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 5.5e-13 77.0 44 90.9
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 3.6e-12 74.3 44 81.8
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 6.1e-12 73.6 44 86.4
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.4e-11 72.4 44 84.1
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 1.4e-11 72.4 44 84.1
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 5.1e-11 70.5 44 81.8
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 2.0e-10 68.6 44 79.5
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 2.0e-10 68.6 44 79.5
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 2.0e-10 68.6 44 79.5
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 2.0e-10 68.6 44 79.5
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 2.0e-10 68.6 44 79.5
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 3.3e-10 67.8 44 77.3
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 5.7e-10 67.0 44 77.3
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.7e-09 65.5 44 75.0
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.7e-09 65.5 44 77.3
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 2.2e-09 65.1 44 77.3
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 2.2e-09 65.1 44 77.3
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 6.3e-09 63.5 44 77.3
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 8.2e-09 63.2 44 72.7
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 1.1e-08 62.8 45 71.1
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 4.1e-08 60.8 44 70.5
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 3.4e-07 57.8 40 75.0
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 7.7e-07 56.6 44 72.7
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.3e-06 55.8 40 67.5


User provided reference genes

Program Settings