Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 1.1e-207 726.5 379 100.0
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 2.7e-57 226.9 227 48.0
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 4.0e-45 186.4 183 47.5
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 2.2e-43 180.6 220 38.2
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 2.4e-42 177.2 220 37.7
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 4.1e-42 176.4 220 37.3
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 5.4e-42 176.0 258 34.9
BcaC02g10021 Brassica carinata HOM05D009356 ORTHO05D010353 2.6e-36 157.1 220 35.5
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 5.4e-34 149.4 284 33.5
BcaC05g28711 Brassica carinata HOM05D009356 ORTHO05D010353 1.3e-32 144.8 275 30.5
BcaC05g26363 Brassica carinata HOM05D009356 ORTHO05D010353 2.1e-30 137.5 220 33.2
BcaC03g14879 Brassica carinata HOM05D009356 ORTHO05D010353 3.1e-29 133.7 277 31.8
C07p25740 Brassica napus HOM05D009356 ORTHO05D010353 6.8e-29 132.5 189 36.0
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 1.9e-26 124.4 205 34.1
BcaC04g22051 Brassica carinata HOM05D009356 ORTHO05D010353 1.6e-25 121.3 176 34.1
BcaB08g35392 Brassica carinata HOM05D009356 ORTHO05D010353 2.7e-25 120.6 119 56.3
BcaC02g11800 Brassica carinata HOM05D009356 ORTHO05D010353 8.7e-24 115.5 160 35.0
Sp7g10380 Schrenkiella parvula HOM05D009356 ORTHO05D011005 1.9e-18 97.8 139 30.9
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 4.2e-18 96.7 203 31.5
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 7.1e-18 95.9 203 31.5
BcaB06g26813 Brassica carinata HOM05D012753 ORTHO05D010353 1.2e-17 95.1 275 26.9
Sp2g06700 Schrenkiella parvula HOM05D009356 ORTHO05D010353 1.2e-17 95.1 136 32.4
Sp1g28960 Schrenkiella parvula HOM05D009356 ORTHO05D010353 2.7e-17 94.0 135 35.6
BraA04t17225Z Brassica rapa HOM05D005339 ORTHO05D006561 6.6e-16 89.4 125 44.8
Sp3g26020 Schrenkiella parvula HOM05D009356 ORTHO05D011005 1.1e-15 88.6 287 28.6
BcaC02g10585 Brassica carinata HOM05D009356 ORTHO05D010353 9.6e-15 85.5 90 54.4
BcaB02g11029 Brassica carinata HOM05D009356 ORTHO05D010353 6.9e-13 79.3 86 47.7
Sp2g06710 Schrenkiella parvula HOM05D009356 ORTHO05D010353 1.2e-12 78.6 187 31.6
AL1G32780 Arabidopsis lyrata HOM05D021774 ORTHO05D002482 2.0e-12 77.8 173 29.5
AL2G32670 Arabidopsis lyrata HOM05D021774 ORTHO05D002482 2.0e-12 77.8 173 29.5
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 2.6e-12 77.4 288 24.0
Aa31sc181G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 4.5e-12 76.6 164 29.9
BcaC05g29185 Brassica carinata HOM05D000977 ORTHO05D010766 9.9e-12 75.5 184 27.2
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 9.9e-12 75.5 206 25.7
Aa31sc185G100 Aethionema arabicum HOM05D003849 ORTHO05D002482 2.2e-11 74.3 165 28.5
Aa31sc546G20 Aethionema arabicum HOM05D003849 ORTHO05D002482 2.2e-11 74.3 165 28.5
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 2.2e-11 74.3 165 25.5
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 2.2e-11 74.3 165 25.5
Aa31LG9G5300 Aethionema arabicum HOM05D003849 ORTHO05D002482 3.8e-11 73.6 165 27.9
AUR62040645 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.9e-11 73.2 173 27.2
Aa31LG7G11650 Aethionema arabicum HOM05D003849 ORTHO05D002482 6.4e-11 72.8 165 27.9
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-10 72.0 173 26.6
Aa31sc1459G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 2.4e-10 70.9 165 27.3
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 2.4e-10 70.9 220 25.5
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 2.4e-10 70.9 220 25.5
AL3G44170 Arabidopsis lyrata HOM05D024197 ORTHO05D006373 3.2e-10 70.5 168 26.2
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 3.2e-10 70.5 220 25.9
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 3.2e-10 70.5 223 26.0
Sp5g17470 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.2e-10 70.5 165 30.9
EL10Ac9g20896 Beta vulgaris HOM05D009474 ORTHO05D006373 4.2e-10 70.1 170 29.4
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 4.2e-10 70.1 148 27.7
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.3e-10 68.9 173 26.0
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.3e-10 68.9 173 26.0
BcaC03g16457 Brassica carinata HOM05D003849 ORTHO05D017533 2.1e-09 67.8 185 24.9
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 2.7e-09 67.4 160 30.0
EL10Ac3g06648 Beta vulgaris HOM05D009474 ORTHO05D006373 4.6e-09 66.6 170 30.0
SpUn0002_0360 Schrenkiella parvula HOM05D007883 ORTHO05D010332 4.6e-09 66.6 127 33.9
EL10Ac3g06674 Beta vulgaris HOM05D009474 ORTHO05D006373 7.9e-09 65.9 205 26.3
Aa31sc596G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 1.0e-08 65.5 166 25.9
Aa31sc886G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 1.0e-08 65.5 166 27.7
EL10Ac3g07114 Beta vulgaris HOM05D009952 ORTHO05D011763 1.0e-08 65.5 213 23.9
EL10Ac8g19408 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-08 65.5 205 26.8
EL10Ac9g20913 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-08 65.5 205 26.8
EL10As24g24232 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-08 65.5 205 26.8
EL10Ac3g05933 Beta vulgaris HOM05D009952 ORTHO05D011763 1.3e-08 65.1 213 23.9
THA.LOC104825741 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 1.3e-08 65.1 252 21.8
EL10Ac6g14023 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-08 64.7 205 26.8
EL10Ac6g14024 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-08 64.7 205 26.8
EL10Ac2g03310 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-08 64.3 205 26.3
EL10Ac4g08488 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-08 64.3 161 28.6
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-08 64.3 167 28.7
Aa31sc1272G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 3.0e-08 63.9 165 26.1
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.0e-08 63.9 131 27.5
EL10Ac2g03104 Beta vulgaris HOM05D009474 ORTHO05D006373 3.9e-08 63.5 205 26.3
Ah.01g012380 Amaranthus hybridus HOM05D009474 ORTHO05D006373 5.1e-08 63.2 161 29.2
EL10Ac7g16650 Beta vulgaris HOM05D009474 ORTHO05D006373 5.1e-08 63.2 198 26.3
EL10Ac8g19716 Beta vulgaris HOM05D009474 ORTHO05D006373 5.1e-08 63.2 206 26.2
Sp3g26400 Schrenkiella parvula HOM05D007883 ORTHO05D010332 5.1e-08 63.2 101 34.7
EL10Ac4g08745 Beta vulgaris HOM05D009474 ORTHO05D006373 6.7e-08 62.8 205 25.9
Aa31LG7G11120 Aethionema arabicum HOM05D003849 ORTHO05D002482 8.7e-08 62.4 165 27.3
Ah.11g039660 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.1e-07 62.0 198 23.2
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-07 62.0 161 26.1
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.1e-07 62.0 161 26.1
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-07 62.0 161 26.1
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.1e-07 62.0 161 26.1
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-07 62.0 161 26.1
EL10Ac5g12647 Beta vulgaris HOM05D009474 ORTHO05D006373 1.5e-07 61.6 197 25.4
THA.LOC104804846 Tarenaya hassleriana HOM05D062396 ORTHO05D006373 1.5e-07 61.6 196 24.5
Ah.15g098220 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.9e-07 61.2 198 23.7
EL10Ac5g11109 Beta vulgaris HOM05D009474 ORTHO05D006373 1.9e-07 61.2 205 25.4
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.9e-07 61.2 161 26.1
EL10Ac1g01682 Beta vulgaris HOM05D009474 ORTHO05D006373 2.5e-07 60.8 205 25.4
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.5e-07 60.8 161 26.1
TPR.G36100 Trifolium pratense HOM05D014681 ORTHO05D006373 2.5e-07 60.8 168 23.8
EL10Ac5g11398 Beta vulgaris HOM05D009952 ORTHO05D011763 3.3e-07 60.5 214 23.8
Aa31sc128G70 Aethionema arabicum HOM05D003849 ORTHO05D002482 4.3e-07 60.1 243 25.1
Ah.13g068710 Amaranthus hybridus HOM05D009952 ORTHO05D011763 4.3e-07 60.1 200 23.5
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 4.3e-07 60.1 148 29.1
Aa31sc714G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 1.3e-06 58.5 162 25.3
AUR62006881 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.6e-06 58.2 164 25.6
HanXRQChr05g0135901 Helianthus annuus HOM05D018814 ORTHO05D020816 2.8e-06 57.4 222 24.8
Sp5g17800 Schrenkiella parvula HOM05D007883 ORTHO05D010332 2.8e-06 57.4 151 29.1
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 3.7e-06 57.0 140 22.9
BcaC09g48661 Brassica carinata HOM05D000267 ORTHO05D010766 4.8e-06 56.6 90 32.2
Sp1g31480 Schrenkiella parvula HOM05D007883 ORTHO05D010332 4.8e-06 56.6 197 26.9
AUR62015317 Chenopodium quinoa HOM05D014981 ORTHO05D017491 6.2e-06 56.2 183 23.5
AUR62015318 Chenopodium quinoa HOM05D014981 ORTHO05D017491 6.2e-06 56.2 183 23.5
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 6.2e-06 56.2 175 22.3
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 8.1e-06 55.8 175 22.3


User provided reference genes

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