Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35642 Brassica carinata HOM05D000353 ORTHO05D024100 1.8e-66 255.8 126 100.0
BcaC02g09187 Brassica carinata HOM05D000353 ORTHO05D024100 7.8e-46 187.2 150 66.0
BcaC01g04104 Brassica carinata HOM05D000353 ORTHO05D021758 1.4e-42 176.4 126 71.4
BcaC03g15554 Brassica carinata HOM05D000353 ORTHO05D021758 2.0e-41 172.6 126 70.6
C09p37730 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-34 149.1 250 40.0
BolC9t56603H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-34 149.1 250 40.0
A07p41090 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-34 147.1 250 39.6
BraA06t25871Z Brassica rapa HOM05D000353 ORTHO05D000174 3.4e-33 145.2 250 39.2
C04p39820 Brassica napus HOM05D000353 ORTHO05D000174 5.8e-33 144.4 247 39.3
BcaC08g46571 Brassica carinata HOM05D000353 ORTHO05D000174 5.8e-25 117.9 78 74.4
C03p49590 Brassica napus HOM05D000353 ORTHO05D000174 9.3e-23 110.5 215 35.3
BolC3t17257H Brassica oleracea HOM05D000353 ORTHO05D000174 9.3e-23 110.5 215 35.3
A01p27320 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-22 107.5 91 60.4
C06p35410 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-22 107.5 226 36.3
BraA01t02870Z Brassica rapa HOM05D000353 ORTHO05D000174 7.8e-22 107.5 91 60.4
BolC8t50703H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-21 105.5 229 35.4
C09p24300 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-21 105.1 91 59.3
BolC9t55347H Brassica oleracea HOM05D000353 ORTHO05D000174 3.9e-21 105.1 91 59.3
BraA03t13683Z Brassica rapa HOM05D000353 ORTHO05D000174 6.6e-21 104.4 91 58.2
BcaC05g27705 Brassica carinata HOM05D000353 ORTHO05D000174 7.6e-17 90.9 156 32.7
A02p35900 Brassica napus HOM05D000353 ORTHO05D000174 6.4e-16 87.8 58 72.4
BNapus_Darmor_BZH_scaffold_82p00080 Brassica napus HOM05D000353 ORTHO05D024100 6.4e-16 87.8 58 72.4
C04p11940 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-14 82.8 78 51.3
C03p61110 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-14 81.6 179 33.0
C05p51080 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-14 81.6 78 50.0
C03p46930 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-13 79.3 76 51.3
BcaC08g43038 Brassica carinata HOM05D020492 ORTHO05D020063 3.0e-13 79.0 44 81.8
A08p15810 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-13 78.6 58 63.8
BcaC02g07795 Brassica carinata HOM05D000353 ORTHO05D000174 5.1e-13 78.2 76 50.0
C09p58500 Brassica napus HOM05D000096 ORTHO05D000045 5.1e-13 78.2 105 39.0
BolC9t55696H Brassica oleracea HOM05D000353 ORTHO05D000174 5.1e-13 78.2 76 50.0
BraA09t38076Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-12 76.6 79 49.4
A04p07180 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-12 76.3 79 49.4
A07p12890 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-12 76.3 79 49.4
A09p15810 Brassica napus HOM05D000353 ORTHO05D024100 1.9e-12 76.3 51 70.6
BolC2t10477H Brassica oleracea HOM05D000353 ORTHO05D000174 2.5e-12 75.9 205 28.8
BolC3t14396H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-11 73.6 210 30.5
BraA09t38700Z Brassica rapa HOM05D000353 ORTHO05D000174 1.3e-11 73.6 79 46.8
A03p68730 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-11 73.2 80 47.5
BraA04t16943Z Brassica rapa HOM05D000353 ORTHO05D000174 1.6e-11 73.2 80 47.5
A05p24020 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-11 72.8 79 46.8
C01p30610 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-11 72.8 80 47.5
BraA08t34238Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-11 72.8 79 46.8
BraA04t16747Z Brassica rapa HOM05D000353 ORTHO05D000174 2.8e-11 72.4 38 86.8
BolC4t24212H Brassica oleracea HOM05D000353 ORTHO05D000174 3.6e-11 72.0 60 53.3
BraA01t02637Z Brassica rapa HOM05D000353 ORTHO05D000174 3.6e-11 72.0 79 46.8
Carub.0149s0002 Capsella rubella HOM05D000353 ORTHO05D000174 3.6e-11 72.0 133 33.8
BcaC08g44124 Brassica carinata HOM05D000353 ORTHO05D027748 6.2e-11 71.2 113 39.8
C04p59210 Brassica napus HOM05D000353 ORTHO05D000174 6.2e-11 71.2 119 32.8
BolC4t27431H Brassica oleracea HOM05D000353 ORTHO05D000174 6.2e-11 71.2 119 32.8
BolC9t57836H Brassica oleracea HOM05D000353 ORTHO05D000174 6.2e-11 71.2 80 46.2
BolC5t32432H Brassica oleracea HOM05D000353 ORTHO05D000174 8.1e-11 70.9 79 43.0
C03p35490 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-10 70.1 58 62.1
BraA08t33914Z Brassica rapa HOM05D000353 ORTHO05D000174 1.4e-10 70.1 80 46.2
BolC1t02998H Brassica oleracea HOM05D000353 ORTHO05D000174 4.0e-10 68.6 80 46.2
BolC7t40561H Brassica oleracea HOM05D000353 ORTHO05D024100 6.9e-10 67.8 48 68.8
BraA06t25347Z Brassica rapa HOM05D000353 ORTHO05D000174 6.9e-10 67.8 105 36.2
C07p08280 Brassica napus HOM05D000353 ORTHO05D000174 9.0e-10 67.4 78 43.6
BolC8t47824H Brassica oleracea HOM05D000353 ORTHO05D000174 9.0e-10 67.4 63 47.6
BcaB01g01501 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-09 67.0 90 43.3
BolC5t34379H Brassica oleracea HOM05D000096 ORTHO05D014489 4.5e-09 65.1 147 28.6
BolC9t58609H Brassica oleracea HOM05D000353 ORTHO05D021758 4.5e-09 65.1 56 60.7
BolC3t19832H Brassica oleracea HOM05D000353 ORTHO05D000174 9.9e-09 63.9 78 42.3
A06p22240 Brassica napus HOM05D000353 ORTHO05D020063 2.2e-08 62.8 35 80.0
Thhalv10003082m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.2e-08 62.8 145 31.0
C02p32960 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-08 61.6 155 27.1
C05p30670 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-08 61.6 76 46.1
BcaC05g28968 Brassica carinata HOM05D000353 ORTHO05D000174 6.4e-08 61.2 86 40.7
BolC3t18786H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-08 61.2 76 46.1
A01p36270 Brassica napus HOM05D000353 ORTHO05D021758 8.4e-08 60.8 48 60.4
C03p65000 Brassica napus HOM05D000353 ORTHO05D000174 8.4e-08 60.8 76 43.4
BcaC02g11686 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-07 60.5 58 53.4
BcaC07g38223 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-07 59.3 78 41.0
C02p13860 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 59.3 86 38.4
BolC2t07505H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-07 59.3 86 38.4
BolC8t48651H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-07 59.3 78 41.0
BraA08t32474Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-07 59.3 83 42.2
BcaC04g20811 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-07 58.5 89 40.4
BcaNung01031 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-07 58.5 89 39.3
A06p22250 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-07 58.5 54 55.6
A09p51930 Brassica napus HOM05D000353 ORTHO05D027862 4.2e-07 58.5 43 58.1
C09p41000 Brassica napus HOM05D000353 ORTHO05D027862 4.2e-07 58.5 47 61.7
BolC9t56755H Brassica oleracea HOM05D000353 ORTHO05D000174 4.2e-07 58.5 89 40.4
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 5.5e-07 58.2 84 42.9
BcaC03g18563 Brassica carinata HOM05D000353 ORTHO05D000174 5.5e-07 58.2 45 57.8
BcaC04g20196 Brassica carinata HOM05D000353 ORTHO05D000174 5.5e-07 58.2 67 41.8
A04p04290 Brassica napus HOM05D000353 ORTHO05D101512 5.5e-07 58.2 56 53.6
BraA09t38370Z Brassica rapa HOM05D000353 ORTHO05D000174 5.5e-07 58.2 44 56.8
BcaC05g27946 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-07 57.8 89 39.3
C04p06370 Brassica napus HOM05D000353 ORTHO05D000174 9.3e-07 57.4 76 42.1
A04p27050 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-06 56.6 83 41.0
C06p45450 Brassica napus HOM05D000353 ORTHO05D021758 1.6e-06 56.6 81 39.5
BolC3t16829H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 56.6 78 39.7
C02p34900 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 56.2 51 51.0
BolC6t35446H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-06 56.2 51 51.0
BcaB03g16606 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 55.8 45 55.6
A03p29610 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 55.5 63 49.2
BraA01t03745Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 55.5 63 49.2
BraA01t03746Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 55.5 63 49.2
BraA01t03747Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 55.5 63 49.2
BraA09t38906Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 55.5 45 55.6
BcaC09g50793 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-06 55.1 92 38.0
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-06 55.1 84 40.5
BcaB06g27468 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-06 54.7 152 29.6
BcaC09g49834 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-06 54.7 79 40.5
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-06 54.7 84 40.5
BolC3t18107H Brassica oleracea HOM05D000353 ORTHO05D000174 6.0e-06 54.7 78 38.5
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 6.0e-06 54.7 84 40.5
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 7.9e-06 54.3 79 36.7
BcaC09g47904 Brassica carinata HOM05D000353 ORTHO05D021758 7.9e-06 54.3 48 56.2
C05p27590 Brassica napus HOM05D000353 ORTHO05D000174 7.9e-06 54.3 62 38.7
BolC5t31479H Brassica oleracea HOM05D000353 ORTHO05D000174 7.9e-06 54.3 62 38.7


User provided reference genes

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