Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 5.6e-152 540.8 253 100.0
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 7.5e-141 503.8 265 91.3
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-138 496.5 264 90.5
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-138 496.1 264 90.2
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 7.8e-138 493.8 264 90.2
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-129 465.7 264 86.7
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 3.9e-129 464.9 259 87.3
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-125 451.8 264 84.5
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-123 445.3 264 83.3
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-116 421.4 254 81.9
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-113 413.7 264 79.9
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 2.5e-112 409.1 264 78.8
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 4.0e-102 375.2 264 68.2
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 7.6e-101 370.9 264 67.8
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.9e-99 366.3 264 67.0
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 6.0e-98 361.3 273 65.9
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-97 359.8 266 65.8
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-97 359.4 266 65.4
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 5.1e-97 358.2 275 64.0
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-96 357.1 266 65.4
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 4.3e-96 355.1 275 64.0
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 7.4e-96 354.4 264 66.3
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 1.6e-95 353.2 275 64.4
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-94 350.1 255 66.3
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-94 349.0 265 66.0
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 5.5e-91 338.2 267 64.0
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 7.2e-91 337.8 264 64.8
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 4.6e-90 335.1 194 84.5
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 7.9e-90 334.3 266 63.9
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 7.9e-90 334.3 266 63.9
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-89 334.0 209 79.9
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 1.3e-89 333.6 266 63.9
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.1e-88 330.5 249 65.5
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.2e-87 326.2 236 65.7
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.3e-84 317.0 267 62.9
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 1.4e-83 313.5 273 59.3
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 1.4e-83 313.5 266 60.9
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-81 304.7 256 60.5
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-78 296.6 253 61.7
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 1.2e-77 293.9 172 79.7
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 3.4e-77 292.4 168 81.5
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 5.9e-77 291.6 171 80.1
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 1.0e-76 290.8 264 57.6
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 1.3e-76 290.4 179 77.7
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 5.0e-76 288.5 168 81.5
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 8.5e-76 287.7 169 81.7
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 4.2e-75 285.4 207 67.1
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 7.2e-75 284.6 265 57.0
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 3.6e-74 282.3 168 80.4
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 4.7e-74 282.0 265 54.0
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 1.0e-73 280.8 265 53.6
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 1.4e-73 280.4 265 56.2
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 3.3e-72 275.8 257 54.5
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 9.7e-72 274.2 168 78.0
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 3.7e-71 272.3 253 55.3
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 1.2e-69 267.3 219 61.2
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.6e-69 266.9 210 61.4
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 4.5e-69 265.4 254 53.5
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 1.0e-68 264.2 254 53.5
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 5.5e-67 258.5 205 62.9
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 8.0e-66 254.6 210 60.5
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.1e-62 244.2 255 54.9
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 1.2e-61 240.7 154 75.3
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-59 234.2 157 72.6
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.5e-59 233.8 215 56.3
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 1.2e-58 230.7 154 73.4
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-57 227.3 157 72.0
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 4.0e-57 225.7 157 72.0
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 4.4e-56 222.2 157 70.1
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 1.2e-53 214.2 261 46.4
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 1.2e-53 214.2 261 46.4
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 1.1e-51 207.6 224 50.0
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 1.5e-51 207.2 254 46.9
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-50 204.1 253 47.8
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 1.6e-50 203.8 213 51.6
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 4.7e-50 202.2 254 45.3
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-49 199.9 144 66.0
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 6.8e-49 198.4 95 96.8
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.5e-48 197.2 245 45.7
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 2.0e-48 196.8 242 45.9
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 2.2e-47 193.4 145 65.5
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.1e-46 191.0 161 60.2
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 4.1e-46 189.1 173 55.5
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 3.5e-45 186.0 123 71.5
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 4.5e-45 185.7 123 72.4
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 7.8e-45 184.9 118 77.1
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 7.8e-45 184.9 224 46.0
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 1.0e-44 184.5 123 71.5
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 1.0e-44 184.5 209 48.8
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 1.0e-44 184.5 151 62.9
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 1.7e-44 183.7 207 50.2
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 2.3e-44 183.3 151 63.6
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 2.9e-44 183.0 118 74.6
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 8.6e-44 181.4 207 49.8
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.9e-43 180.3 139 61.2
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 3.6e-42 176.0 153 58.8
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 6.1e-42 175.3 286 38.5
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 1.8e-41 173.7 204 49.5
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 9.8e-40 167.9 242 41.3
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 4.1e-38 162.5 123 62.6
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 4.1e-38 162.5 123 62.6
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 9.2e-38 161.4 160 55.0
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 3.5e-37 159.5 130 63.8
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 1.0e-36 157.9 253 38.7
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 6.6e-36 155.2 160 53.1
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 6.6e-36 155.2 253 37.5
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 1.1e-33 147.9 93 76.3
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.8e-33 147.1 160 51.2
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 6.8e-33 145.2 73 94.5
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 8.9e-33 144.8 158 50.0
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 8.9e-33 144.8 158 50.0
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 1.5e-32 144.1 158 50.0
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 1.5e-32 144.1 158 50.0
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 4.4e-32 142.5 127 58.3
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 4.4e-32 142.5 92 70.7
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 7.5e-32 141.7 106 66.0
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 9.8e-32 141.4 132 57.6
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 1.1e-30 137.9 140 51.4
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 1.4e-30 137.5 136 55.9
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 3.2e-30 136.3 123 53.7
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 1.6e-29 134.0 105 61.0
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 3.5e-29 132.9 205 38.5
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 3.5e-29 132.9 205 38.5
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 6.0e-29 132.1 142 52.1
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 6.0e-29 132.1 142 52.1
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 8.6e-28 128.3 102 62.7
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 3.3e-27 126.3 86 64.0
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 9.5e-27 124.8 153 43.8
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 1.6e-26 124.0 97 62.9
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 4.0e-25 119.4 95 63.2
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 3.4e-24 116.3 95 57.9
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.9e-22 110.5 89 62.9
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 1.2e-21 107.8 87 62.1
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 1.2e-21 107.8 73 68.5
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 3.5e-21 106.3 156 41.7
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 4.6e-21 105.9 67 67.2
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 7.8e-21 105.1 105 55.2
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 1.3e-20 104.4 156 41.7
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 1.7e-20 104.0 253 32.4
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 2.3e-20 103.6 71 66.2
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 2.3e-20 103.6 71 66.2
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 5.6e-19 99.0 111 49.5
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 4.7e-18 95.9 101 49.5
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 5.2e-17 92.4 53 71.7
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 1.5e-16 90.9 86 57.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.3e-15 87.8 89 53.9
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 4.9e-15 85.9 73 60.3
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 1.9e-14 84.0 67 62.7
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 7.1e-14 82.0 89 49.4
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 9.2e-14 81.6 90 51.1
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 1.0e-12 78.2 95 44.2
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 1.7e-12 77.4 49 69.4
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.9e-11 73.9 61 62.3
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 7.3e-11 72.0 71 49.3
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 9.6e-11 71.6 73 50.7
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 3.6e-10 69.7 264 26.5
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 4.7e-10 69.3 82 48.8
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 2.9e-07 60.1 116 32.8
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 1.9e-06 57.4 39 59.0


User provided reference genes

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