Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-237 825.5 405 100.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 9.2e-24 115.5 68 88.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.3e-21 107.1 114 58.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 4.3e-21 106.7 126 57.1
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 4.3e-21 106.7 65 86.2
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 4.3e-21 106.7 65 86.2
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 9.6e-21 105.5 65 86.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.2e-20 105.1 65 86.2
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.1e-19 102.1 114 56.1
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.4e-19 101.7 64 85.9
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.8e-19 101.3 114 55.3
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.1e-19 100.5 67 80.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 3.1e-19 100.5 117 56.4
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 3.1e-19 100.5 117 56.4
BcaC06g32550 Brassica carinata HOM05D000044 ORTHO05D027225 5.8e-18 96.3 109 54.1
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 5.8e-18 96.3 117 53.8
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 9.9e-18 95.5 71 69.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.2e-17 94.4 65 75.4
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.8e-17 93.6 64 78.1
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 4.9e-17 93.2 65 76.9
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.9e-17 93.2 64 76.6
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 6.4e-17 92.8 64 76.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 6.4e-17 92.8 68 72.1
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.4e-17 92.8 64 76.6
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 6.4e-17 92.8 64 78.1
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.1e-16 92.0 64 73.4
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.4e-16 91.7 64 75.0
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.9e-16 91.3 64 75.0
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.9e-16 91.3 64 73.4
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.9e-16 91.3 65 72.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.4e-16 90.9 114 51.8
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.4e-16 90.9 64 73.4
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 2.4e-16 90.9 64 71.9
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.4e-16 90.9 62 77.4
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.2e-16 90.5 64 71.9
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 3.2e-16 90.5 63 76.2
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.2e-16 90.5 64 75.0
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 4.2e-16 90.1 64 73.4
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 5.4e-16 89.7 64 73.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.1e-16 89.4 64 73.4
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 9.3e-16 89.0 64 73.4
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.2e-15 88.6 71 64.8
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.2e-15 88.6 62 75.8
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.2e-15 88.6 62 75.8
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.6e-15 88.2 64 73.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.6e-15 88.2 64 71.9
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.6e-15 88.2 64 71.9
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.1e-15 87.8 64 70.3
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.1e-15 87.8 64 73.4
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.7e-15 87.4 64 70.3
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.5e-15 87.0 64 70.3
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 3.5e-15 87.0 108 50.0
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 3.5e-15 87.0 64 70.3
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.6e-15 86.7 64 70.3
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.6e-15 86.7 64 70.3
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.6e-15 86.7 64 70.3
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 6.0e-15 86.3 64 70.3
BcaB08g34578 Brassica carinata HOM05D024903 ORTHO05D027225 6.0e-15 86.3 64 68.8
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.0e-15 86.3 64 71.9
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.0e-15 86.3 64 71.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 6.0e-15 86.3 64 68.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.8e-15 85.9 64 70.3
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.8e-15 85.9 64 68.8
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 7.8e-15 85.9 64 70.3
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.0e-14 85.5 65 66.2
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.3e-14 85.1 64 68.8
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.3e-14 85.1 64 67.2
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.3e-14 85.1 64 65.6
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.7e-14 84.7 64 68.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.7e-14 84.7 64 70.3
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.3e-14 84.3 64 70.3
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.0e-14 84.0 64 68.8
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.0e-14 84.0 64 68.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 3.9e-14 83.6 64 68.8
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 5.1e-14 83.2 84 58.3
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.1e-14 83.2 63 65.1
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 6.6e-14 82.8 63 69.8
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.6e-14 82.8 126 45.2
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 8.7e-14 82.4 64 67.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 8.7e-14 82.4 64 67.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.1e-13 82.0 64 67.2
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.1e-13 82.0 64 67.2
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.5e-13 81.6 62 67.7
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.5e-13 81.6 64 65.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.9e-13 81.3 64 67.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 2.5e-13 80.9 60 70.0
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.6e-13 79.7 63 66.7
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.6e-13 79.7 63 66.7
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 5.6e-13 79.7 62 67.7
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 7.3e-13 79.3 105 48.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 7.3e-13 79.3 64 65.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 7.3e-13 79.3 64 64.1
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 9.6e-13 79.0 61 67.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.3e-12 78.6 64 64.1
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.6e-12 78.2 64 64.1
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.8e-12 77.4 70 64.3
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 4.8e-12 76.6 64 62.5
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.4e-11 74.3 65 60.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.4e-11 74.3 57 70.2
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.1e-11 73.9 58 67.2
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.0e-11 73.6 64 60.9
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 5.3e-11 73.2 55 74.5
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.2e-10 72.0 53 73.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 6.4e-09 66.2 55 67.3
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.9e-08 64.7 64 53.1
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.4e-08 64.3 72 43.1
C02p21480 Brassica napus HOM05D024903 ORTHO05D027225 7.1e-08 62.8 55 61.8
BolC2t08287H Brassica oleracea HOM05D024903 ORTHO05D027225 7.1e-08 62.8 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.6e-07 61.6 64 46.9
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.1e-07 61.2 64 51.6
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 6.0e-07 59.7 36 77.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 6.7e-06 56.2 51 64.7


User provided reference genes

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