Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35443 Brassica carinata HOM05D009117 ORTHO05D024074 1.4e-190 669.5 348 100.0
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 9.6e-70 268.1 285 58.9
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 6.9e-52 208.8 178 61.8
BraA05t21292Z Brassica rapa HOM05D009117 ORTHO05D024074 1.3e-34 151.4 176 58.5
A10p10590 Brassica napus HOM05D009117 ORTHO05D024074 2.9e-34 150.2 149 57.0
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 3.7e-21 106.7 289 34.6
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 2.9e-18 97.1 168 38.1
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 7.0e-12 75.9 59 59.3
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 9.1e-12 75.5 59 59.3
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 2.7e-11 73.9 59 57.6
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 2.7e-11 73.9 59 57.6
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 2.7e-11 73.9 58 58.6
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 2.7e-11 73.9 59 59.3
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 2.7e-11 73.9 59 59.3
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 2.7e-11 73.9 59 59.3
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 7.7e-11 72.4 59 57.6
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 7.7e-11 72.4 59 57.6
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-10 71.6 59 57.6
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 1.7e-10 71.2 59 57.6
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 5.0e-10 69.7 189 29.6
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 5.0e-10 69.7 189 29.6
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 6.5e-10 69.3 59 55.9
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 8.5e-10 68.9 168 30.4
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 1.5e-09 68.2 126 33.3
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 6.8e-07 59.3 153 28.1
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 1.5e-06 58.2 56 44.6
BcaB04g17714 Brassica carinata HOM05D009117 ORTHO05D091183 7.5e-06 55.8 63 47.6


User provided reference genes

Program Settings