Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 1.9e-189 665.6 327 100.0
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 2.8e-71 273.1 273 54.2
C09p50140 Brassica napus HOM05D006289 ORTHO05D024275 2.9e-68 263.1 273 53.5
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 1.9e-64 250.4 277 50.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 4.6e-58 229.2 422 36.7
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.6e-55 220.7 423 34.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.2e-50 204.5 378 36.2
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 2.2e-44 183.7 424 31.4
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 2.7e-42 176.8 424 30.9
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 2.7e-42 176.8 424 30.9
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 9.1e-38 161.8 304 36.2
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 8.5e-28 128.6 400 28.0
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.7e-26 123.6 331 29.0
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 4.0e-25 119.8 250 34.4
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 8.8e-25 118.6 271 33.9
BolC9t57872H Brassica oleracea HOM05D006289 ORTHO05D024275 7.5e-24 115.5 68 79.4
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 3.7e-23 113.2 272 32.7
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.8e-22 110.9 368 29.1
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.1e-22 110.2 297 27.3
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 7.7e-21 105.5 176 37.5
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.2e-20 104.0 388 30.2
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 5.0e-20 102.8 259 32.8
C02p45470 Brassica napus HOM05D006289 ORTHO05D103884 6.1e-18 95.9 115 40.9
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 1.4e-17 94.7 324 27.5
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.8e-17 94.4 340 27.1
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 5.2e-17 92.8 84 54.8
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 5.2e-17 92.8 84 54.8
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 5.2e-17 92.8 84 54.8
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 2.0e-16 90.9 357 27.2
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 2.6e-16 90.5 343 26.5
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 3.7e-15 86.7 350 27.1
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 3.7e-15 86.7 350 27.1
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 8.3e-15 85.5 215 29.3
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 1.1e-14 85.1 360 25.0
BcaB01g01126 Brassica carinata HOM05D006289 ORTHO05D091123 2.4e-14 84.0 200 31.0
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 5.9e-13 79.3 376 25.5
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 5.0e-12 76.3 259 28.2
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 5.6e-11 72.8 253 28.1
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 5.6e-11 72.8 253 28.1
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 5.6e-11 72.8 253 28.1
BcaC01g02303 Brassica carinata HOM05D006289 ORTHO05D018698 7.2e-11 72.4 142 37.3
BraA08t34504Z Brassica rapa HOM05D006289 ORTHO05D039808 3.6e-10 70.1 205 28.3
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 8.0e-10 68.9 59 52.5
C02p45460 Brassica napus HOM05D044182 ORTHO05D102825 1.5e-08 64.7 68 55.9
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 3.4e-08 63.5 149 30.2
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 9.8e-08 62.0 90 36.7
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 2.2e-07 60.8 62 48.4
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 4.9e-07 59.7 56 48.2
C09p52190 Brassica napus HOM05D044182 ORTHO05D102078 1.1e-06 58.5 116 41.4
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 5.4e-06 56.2 71 39.4
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 5.4e-06 56.2 51 54.9
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 5.4e-06 56.2 71 39.4
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 5.4e-06 56.2 51 54.9
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 5.4e-06 56.2 71 39.4


User provided reference genes

Program Settings