Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 7.8e-55 216.9 107 100.0
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 3.9e-30 134.8 107 61.7
BcaB04g17916 Brassica carinata HOM05D000353 ORTHO05D023971 1.4e-27 126.3 107 57.9
C02p34250 Brassica napus HOM05D000353 ORTHO05D023971 7.9e-23 110.5 106 51.9
BcaC01g04969 Brassica carinata HOM05D000675 ORTHO05D032797 1.3e-20 103.2 75 65.3
BolC3t15504H Brassica oleracea HOM05D000675 ORTHO05D032797 1.3e-20 103.2 75 65.3
C03p31610 Brassica napus HOM05D000675 ORTHO05D032797 2.8e-20 102.1 75 64.0
BcaB05g22296 Brassica carinata HOM05D000675 ORTHO05D023971 7.6e-18 94.0 82 63.4
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 3.2e-16 88.6 94 47.9
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 1.2e-15 86.7 99 47.5
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 4.6e-15 84.7 99 45.5
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 4.6e-15 84.7 99 45.5
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 3.0e-14 82.0 97 44.3
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 2.5e-13 79.0 101 42.6
BcaC03g16593 Brassica carinata HOM05D000353 ORTHO05D027349 1.6e-12 76.3 80 45.0
C02p44150 Brassica napus HOM05D000353 ORTHO05D027349 1.6e-12 76.3 80 45.0
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-10 69.7 81 44.4
A02p27960 Brassica napus HOM05D000353 ORTHO05D027349 5.8e-10 67.8 80 43.8
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 1.3e-09 66.6 102 33.3
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 1.7e-09 66.2 102 33.3
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.9e-09 65.5 96 34.4
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 2.9e-09 65.5 99 34.3
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 2.9e-09 65.5 99 33.3
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 2.9e-09 65.5 99 33.3
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 3.8e-09 65.1 102 33.3
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 3.8e-09 65.1 99 34.3
BcaB06g27261 Brassica carinata HOM05D000471 ORTHO05D000199 4.9e-09 64.7 67 46.3
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 4.9e-09 64.7 102 33.3
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 4.9e-09 64.7 98 33.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 4.9e-09 64.7 102 33.3
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 6.5e-09 64.3 96 34.4
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 8.4e-09 63.9 99 32.3
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 1.1e-08 63.5 98 32.7
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 1.4e-08 63.2 102 31.4
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 1.4e-08 63.2 95 33.7
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 1.4e-08 63.2 103 35.0
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.9e-08 62.8 98 32.7
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 1.9e-08 62.8 99 32.3
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.9e-08 62.8 98 32.7
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.9e-08 62.8 99 32.3
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 2.5e-08 62.4 102 33.3
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-08 62.0 98 32.7
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-08 62.0 102 31.4
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 3.2e-08 62.0 99 31.3
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 3.2e-08 62.0 99 31.3
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-08 61.6 98 32.7
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 4.2e-08 61.6 96 33.3
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-08 61.6 98 33.7
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-08 61.6 98 33.7
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 5.5e-08 61.2 91 35.2
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 5.5e-08 61.2 98 32.7
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 5.5e-08 61.2 98 32.7
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 7.1e-08 60.8 99 31.3
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 7.1e-08 60.8 92 34.8
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 9.3e-08 60.5 98 32.7
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 9.3e-08 60.5 98 32.7
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-07 60.1 95 34.7
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.2e-07 60.1 95 34.7
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 1.6e-07 59.7 94 34.0
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 1.6e-07 59.7 95 32.6
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-07 59.7 98 32.7
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 1.6e-07 59.7 95 32.6
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 1.6e-07 59.7 98 32.7
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 1.6e-07 59.7 98 32.7
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-07 59.3 95 28.4
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 2.7e-07 58.9 98 32.7
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 2.7e-07 58.9 92 34.8
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 2.7e-07 58.9 98 31.6
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 2.7e-07 58.9 98 31.6
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 2.7e-07 58.9 98 32.7
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-06 57.0 92 33.7
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.0e-06 57.0 87 35.6
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 1.3e-06 56.6 91 33.0
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 1.3e-06 56.6 87 35.6
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-06 56.6 87 35.6
BcaB08g34464 Brassica carinata HOM05D009214 ORTHO05D093038 1.8e-06 56.2 73 42.5
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 2.3e-06 55.8 91 33.0
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.3e-06 55.8 84 38.1
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 2.3e-06 55.8 91 33.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-06 55.5 92 33.7
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-06 55.5 92 32.6
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-06 55.5 67 38.8
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 3.9e-06 55.1 84 33.3
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 6.7e-06 54.3 92 31.5
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 6.7e-06 54.3 95 29.5
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 6.7e-06 54.3 95 31.6
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 6.7e-06 54.3 90 32.2
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 8.7e-06 53.9 95 29.5
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 8.7e-06 53.9 86 32.6
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 8.7e-06 53.9 92 33.7
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 8.7e-06 53.9 92 33.7


User provided reference genes

Program Settings