Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 6.1e-278 960.3 528 100.0
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 1.1e-82 311.6 328 56.1
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 7.5e-66 255.8 183 76.0
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 9.7e-66 255.4 183 76.0
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.3e-65 255.0 183 76.0
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.1e-64 251.9 347 49.9
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.4e-64 251.5 343 50.1
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 1.8e-64 251.1 289 55.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 2.0e-63 247.7 343 53.4
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 9.1e-56 222.2 207 69.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 1.2e-52 211.8 209 64.6
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 1.4e-51 208.4 208 66.3
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 1.5e-50 204.9 206 65.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.8e-49 200.7 374 40.9
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 1.6e-47 194.9 144 73.6
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 3.9e-46 190.3 243 58.0
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 3.9e-46 190.3 194 67.0
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 3.3e-45 187.2 215 62.3
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 3.3e-45 187.2 215 62.3
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 3.3e-45 187.2 215 62.3
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 3.6e-44 183.7 353 39.1
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 4.7e-44 183.3 354 38.4
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 1.8e-43 181.4 124 77.4
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 3.4e-42 177.2 197 60.4
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 1.3e-41 175.3 210 64.8
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 1.1e-40 172.2 106 80.2
BcaNung05554 Brassica carinata HOM05D007694 ORTHO05D019980 1.7e-33 148.3 143 71.3
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 2.2e-33 147.9 110 66.4
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 6.4e-33 146.4 87 85.1
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 1.9e-32 144.8 185 60.5
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.9e-32 144.8 196 49.0
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 2.7e-31 141.0 221 48.9
BcaC01g05258 Brassica carinata HOM05D007694 ORTHO05D096253 5.8e-26 123.2 157 51.6
BcaC07g37747 Brassica carinata HOM05D007694 ORTHO05D019980 1.1e-24 119.0 75 77.3
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.7e-22 111.7 198 58.6
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.9e-22 110.5 199 54.3
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 1.4e-19 102.1 73 71.2
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 4.0e-19 100.5 103 55.3
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 4.0e-19 100.5 103 55.3
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 4.0e-19 100.5 103 55.3
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 5.2e-19 100.1 288 30.9
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.2e-18 99.0 103 53.4
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.6e-18 97.8 103 53.4
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 4.4e-18 97.1 152 63.8
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 2.2e-17 94.7 103 52.4
BraA02t05833Z Brassica rapa HOM05D012090 ORTHO05D012993 6.4e-17 93.2 54 85.2
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 8.4e-17 92.8 102 52.0
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 8.4e-17 92.8 97 53.6
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.1e-16 92.4 102 52.0
C07p21690 Brassica napus HOM05D012090 ORTHO05D016799 1.9e-16 91.7 87 59.8
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 2.4e-16 91.3 57 77.2
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 2.4e-16 91.3 103 50.5
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 4.2e-16 90.5 354 38.1
BolC7t42700H Brassica oleracea HOM05D012090 ORTHO05D016799 4.2e-16 90.5 87 58.6
BcaC06g34930 Brassica carinata HOM05D012090 ORTHO05D016799 5.4e-16 90.1 86 59.3
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 5.4e-16 90.1 103 48.5
C05p30650 Brassica napus HOM05D012090 ORTHO05D016799 7.1e-16 89.7 62 75.8
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 7.1e-16 89.7 354 38.1
BcaC05g27170 Brassica carinata HOM05D012090 ORTHO05D016799 1.2e-15 89.0 119 47.9
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.2e-15 89.0 103 47.6
BolC5t31798H Brassica oleracea HOM05D012090 ORTHO05D016799 1.2e-15 89.0 119 47.9
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 2.1e-15 88.2 103 49.5
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 3.5e-15 87.4 103 51.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 3.5e-15 87.4 103 51.5
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 6.0e-15 86.7 103 47.6
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.7e-14 85.1 103 49.5
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 3.0e-14 84.3 95 51.6
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 3.9e-14 84.0 103 50.5
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 3.9e-14 84.0 45 88.9
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 3.9e-14 84.0 103 49.5
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 1.1e-13 82.4 103 49.5
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 1.5e-13 82.0 103 48.5
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.9e-13 81.6 103 49.5
A02p28260 Brassica napus HOM05D012090 ORTHO05D016799 3.3e-13 80.9 62 69.4
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 7.3e-13 79.7 103 48.5
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 9.6e-13 79.3 133 39.8
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.3e-12 79.0 81 54.3
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 1.3e-12 79.0 81 54.3
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 1.3e-12 79.0 103 48.5
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 1.3e-12 79.0 81 54.3
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.3e-12 79.0 61 63.9
BcaC03g16495 Brassica carinata HOM05D007986 ORTHO05D003268 3.6e-12 77.4 77 46.8
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 4.8e-12 77.0 126 41.3
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 6.2e-12 76.6 128 40.6
BcaB06g27774 Brassica carinata HOM05D007986 ORTHO05D003268 8.1e-12 76.3 137 35.0
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 1.1e-11 75.9 68 58.8
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.1e-11 75.9 102 45.1
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 1.4e-11 75.5 102 45.1
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 1.8e-11 75.1 88 48.9
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 1.8e-11 75.1 88 48.9
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 4.0e-11 73.9 94 38.3
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 4.0e-11 73.9 88 47.7
BcaC03g16268 Brassica carinata HOM05D008596 ORTHO05D093714 9.0e-11 72.8 66 48.5
BcaC07g38100 Brassica carinata HOM05D007694 ORTHO05D093269 1.5e-10 72.0 84 54.8
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 2.6e-10 71.2 82 52.4
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.6e-10 71.2 82 52.4
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 3.4e-10 70.9 85 43.5
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 3.4e-10 70.9 91 48.4
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 3.4e-10 70.9 91 48.4
BcaC03g16132 Brassica carinata HOM05D007986 ORTHO05D003268 4.4e-10 70.5 73 42.5
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 4.4e-10 70.5 91 48.4
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 4.4e-10 70.5 87 40.2
BraA05t21054Z Brassica rapa HOM05D007986 ORTHO05D003268 5.8e-10 70.1 81 44.4
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 7.6e-10 69.7 74 55.4
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 7.6e-10 69.7 79 49.4
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 7.6e-10 69.7 79 49.4
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 7.6e-10 69.7 82 52.4
BcaC01g02179 Brassica carinata HOM05D007986 ORTHO05D003268 9.9e-10 69.3 74 45.9
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 9.9e-10 69.3 80 51.2
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 9.9e-10 69.3 74 52.7
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 9.9e-10 69.3 88 37.5
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 1.3e-09 68.9 123 46.3
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 1.3e-09 68.9 112 49.1
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 1.3e-09 68.9 123 46.3
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 1.7e-09 68.6 123 45.5
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 1.7e-09 68.6 116 48.3
BraA09t38727Z Brassica rapa HOM05D007986 ORTHO05D003268 1.7e-09 68.6 85 37.6
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 1.7e-09 68.6 123 45.5
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 2.2e-09 68.2 83 41.0
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 6.4e-09 66.6 94 34.0
BcaC03g16524 Brassica carinata HOM05D007986 ORTHO05D003268 8.4e-09 66.2 74 41.9
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 1.4e-08 65.5 149 32.9
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.4e-08 65.5 68 52.9
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.4e-08 65.5 68 52.9
BraA09t38672Z Brassica rapa HOM05D044414 ORTHO05D043157 1.9e-08 65.1 60 45.0
BcaB08g34673 Brassica carinata HOM05D007986 ORTHO05D003268 2.4e-08 64.7 86 37.2
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 3.2e-08 64.3 82 45.1
BcaC01g02127 Brassica carinata HOM05D007986 ORTHO05D003268 3.2e-08 64.3 81 38.3
BcaC01g02176 Brassica carinata HOM05D008596 ORTHO05D027031 3.2e-08 64.3 67 44.8
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 3.2e-08 64.3 45 77.8
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 3.2e-08 64.3 199 30.7
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 3.2e-08 64.3 67 44.8
BolSC21t60287H Brassica oleracea HOM05D008596 ORTHO05D027031 3.2e-08 64.3 67 44.8
C03p67400 Brassica napus HOM05D008596 ORTHO05D027031 5.4e-08 63.5 67 44.8
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 7.1e-08 63.2 88 52.3
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 3.5e-07 60.8 36 80.6
A03p66770 Brassica napus HOM05D008596 ORTHO05D003268 3.5e-07 60.8 86 34.9
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-07 60.5 73 43.8
BcaC05g27639 Brassica carinata HOM05D008596 ORTHO05D032374 6.0e-07 60.1 63 41.3
A01p26840 Brassica napus HOM05D008596 ORTHO05D003268 7.9e-07 59.7 68 36.8
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 1.3e-06 58.9 145 37.9
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 1.3e-06 58.9 62 43.5
BcaB07g33058 Brassica carinata HOM05D003421 ORTHO05D003268 2.3e-06 58.2 74 41.9
BcaC05g27662 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-06 58.2 64 37.5
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 2.3e-06 58.2 56 41.1
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 3.0e-06 57.8 54 63.0
BcaB02g11464 Brassica carinata HOM05D007986 ORTHO05D003268 5.1e-06 57.0 74 39.2
A09p41260 Brassica napus HOM05D016611 ORTHO05D099774 5.1e-06 57.0 45 66.7
C05p36280 Brassica napus HOM05D008596 ORTHO05D032374 6.6e-06 56.6 54 44.4
BraA01t00165Z Brassica rapa HOM05D009832 ORTHO05D012823 6.6e-06 56.6 43 67.4
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 8.7e-06 56.2 85 38.8


User provided reference genes

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