Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 5.5e-178 627.5 306 100.0
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-68 261.5 477 38.4
BcaC07g38371 Brassica carinata HOM05D009521 ORTHO05D027438 2.8e-57 226.5 322 43.8
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 2.4e-56 223.4 497 33.2
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 2.5e-50 203.4 487 34.5
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-48 196.4 450 34.9
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 1.2e-28 131.3 325 32.3
BcaC06g34875 Brassica carinata HOM05D000003 ORTHO05D000006 2.3e-27 127.1 65 84.6
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-26 123.2 532 25.9
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 8.3e-25 118.6 517 26.7
BolC6t35884H Brassica oleracea HOM05D000496 ORTHO05D013247 1.4e-24 117.9 171 44.4
BcaC05g28546 Brassica carinata HOM05D000003 ORTHO05D000006 3.1e-24 116.7 70 72.9
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 7.0e-24 115.5 520 27.1
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 3.5e-23 113.2 332 28.6
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-22 111.7 299 29.1
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 1.3e-22 111.3 305 29.8
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-22 110.9 292 29.5
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-22 110.5 510 26.9
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-22 110.5 557 23.9
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-22 109.8 70 70.0
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-22 109.8 570 23.9
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 8.5e-22 108.6 319 26.3
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-21 107.8 70 68.6
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 5.5e-21 105.9 169 39.1
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 7.2e-21 105.5 125 44.8
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-21 105.1 553 25.7
BraA04t15790Z Brassica rapa HOM05D009214 ORTHO05D027438 2.1e-20 104.0 124 47.6
BcaC05g27908 Brassica carinata HOM05D000003 ORTHO05D000006 3.0e-19 100.1 64 67.2
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 3.0e-19 100.1 129 46.5
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-19 99.4 66 68.2
BcaB06g28004 Brassica carinata HOM05D000003 ORTHO05D000006 5.2e-19 99.4 295 29.8
BcaC07g36967 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-19 99.4 66 66.7
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-19 99.0 592 23.1
BcaC03g15337 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-18 98.2 65 61.5
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-18 97.1 554 23.6
BcaC03g17105 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-18 96.7 121 46.3
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-18 96.7 399 27.8
BcaC08g43434 Brassica carinata HOM05D009521 ORTHO05D013247 7.5e-18 95.5 344 29.7
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 7.5e-18 95.5 312 29.5
BcaC09g47652 Brassica carinata HOM05D000003 ORTHO05D000006 2.8e-17 93.6 62 62.9
BolC2t06006H Brassica oleracea HOM05D010185 ORTHO05D027115 3.7e-17 93.2 126 42.1
BolC8t47400H Brassica oleracea HOM05D000003 ORTHO05D000006 3.7e-17 93.2 55 72.7
BcaB08g34387 Brassica carinata HOM05D000003 ORTHO05D000006 4.9e-17 92.8 64 59.4
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-17 92.0 576 23.6
C02p49320 Brassica napus HOM05D000003 ORTHO05D013521 1.1e-16 91.7 65 58.5
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 3.1e-16 90.1 78 51.3
BcaC02g09909 Brassica carinata HOM05D000003 ORTHO05D000006 4.1e-16 89.7 64 57.8
BcaC03g13088 Brassica carinata HOM05D000003 ORTHO05D027115 1.6e-15 87.8 126 41.3
BcaB03g15672 Brassica carinata HOM05D000003 ORTHO05D000006 2.7e-15 87.0 101 45.5
BcaB05g25282 Brassica carinata HOM05D000003 ORTHO05D000006 2.7e-15 87.0 70 54.3
BcaB05g21810 Brassica carinata HOM05D009521 ORTHO05D013247 1.0e-14 85.1 94 52.1
Carub.0002s0960 Capsella rubella HOM05D000003 ORTHO05D000006 2.9e-14 83.6 70 52.9
BcaB01g04306 Brassica carinata HOM05D000003 ORTHO05D000006 8.6e-14 82.0 57 61.4
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 1.1e-13 81.6 100 52.0
BcaB07g32061 Brassica carinata HOM05D000003 ORTHO05D000006 3.3e-13 80.1 64 51.6
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 3.3e-13 80.1 364 25.8
BcaC01g00332 Brassica carinata HOM05D000003 ORTHO05D000006 4.2e-13 79.7 70 51.4
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 9.5e-13 78.6 77 46.8
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 1.2e-12 78.2 85 52.9
BcaB03g14951 Brassica carinata HOM05D009521 ORTHO05D013247 1.8e-11 74.3 73 54.8
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 2.3e-11 73.9 66 50.0
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 2.3e-11 73.9 88 47.7
A09p12700 Brassica napus HOM05D011474 ORTHO05D016098 4.0e-11 73.2 122 36.9
BcaC04g21195 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-11 72.8 401 23.4
BcaC09g51489 Brassica carinata HOM05D000003 ORTHO05D000411 5.2e-11 72.8 93 39.8
BraA07t28028Z Brassica rapa HOM05D010185 ORTHO05D015459 5.2e-11 72.8 139 36.7
BraA06t26209Z Brassica rapa HOM05D010185 ORTHO05D015459 8.9e-11 72.0 125 40.0
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 1.2e-10 71.6 161 32.9
A04p28190 Brassica napus HOM05D010185 ORTHO05D016098 1.2e-10 71.6 89 43.8
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-10 71.6 96 42.7
BcaC03g14454 Brassica carinata HOM05D009521 ORTHO05D092480 1.5e-10 71.2 66 54.5
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 2.0e-10 70.9 148 31.8
BolC3t20253H Brassica oleracea HOM05D010185 ORTHO05D016098 2.0e-10 70.9 79 43.0
BcaB01g00821 Brassica carinata HOM05D010185 ORTHO05D015459 2.6e-10 70.5 93 44.1
A02p27000 Brassica napus HOM05D009214 ORTHO05D016098 3.4e-10 70.1 102 38.2
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 5.7e-10 69.3 70 52.9
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 5.7e-10 69.3 120 35.8
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 9.8e-10 68.6 201 30.8
BolC8t47004H Brassica oleracea HOM05D009521 ORTHO05D013247 9.8e-10 68.6 116 37.9
BraA02t07715Z Brassica rapa HOM05D010185 ORTHO05D016098 9.8e-10 68.6 104 39.4
A04p11750 Brassica napus HOM05D009214 ORTHO05D024265 1.3e-09 68.2 113 41.6
C07p06470 Brassica napus HOM05D010185 ORTHO05D015459 1.3e-09 68.2 170 32.9
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-09 68.2 79 48.1
C03p80010 Brassica napus HOM05D010185 ORTHO05D016098 2.9e-09 67.0 116 33.6
A03p15520 Brassica napus HOM05D010185 ORTHO05D015459 3.7e-09 66.6 80 46.2
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 6.3e-09 65.9 93 36.6
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 6.3e-09 65.9 57 47.4
BraA03t10622Z Brassica rapa HOM05D009521 ORTHO05D013247 6.3e-09 65.9 68 54.4
BolC5t31358H Brassica oleracea HOM05D010185 ORTHO05D015459 8.3e-09 65.5 103 39.8
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 8.3e-09 65.5 129 31.0
BolC8t47401H Brassica oleracea HOM05D009521 ORTHO05D013247 8.3e-09 65.5 171 32.7
BraA08t32635Z Brassica rapa HOM05D010185 ORTHO05D015459 1.1e-08 65.1 170 30.0
BcaB04g17620 Brassica carinata HOM05D009521 ORTHO05D013247 1.4e-08 64.7 111 45.0
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 1.4e-08 64.7 170 32.4
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-08 64.3 97 36.1
BcaB02g10743 Brassica carinata HOM05D010185 ORTHO05D000006 1.8e-08 64.3 127 34.6
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 64.3 64 43.8
A01p35560 Brassica napus HOM05D010185 ORTHO05D015459 1.8e-08 64.3 169 31.4
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 2.4e-08 63.9 184 29.3
BolC8t46808H Brassica oleracea HOM05D010185 ORTHO05D000411 2.4e-08 63.9 111 36.9
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 3.2e-08 63.5 159 31.4
BolC9t57308H Brassica oleracea HOM05D010185 ORTHO05D015459 3.2e-08 63.5 94 37.2
BcaB08g34738 Brassica carinata HOM05D010185 ORTHO05D016098 4.1e-08 63.2 151 33.1
Aa31sc914G60 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.4e-08 62.8 384 21.9
BcaC04g20372 Brassica carinata HOM05D010185 ORTHO05D015459 5.4e-08 62.8 94 36.2
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 9.2e-08 62.0 64 42.2
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 9.2e-08 62.0 331 24.8
BcaC09g49291 Brassica carinata HOM05D000496 ORTHO05D000411 9.2e-08 62.0 59 42.4
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 61.6 65 40.0
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-07 61.6 61 44.3
BcaB05g24019 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 61.2 65 40.0
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.6e-07 61.2 62 40.3
BolC4t25083H Brassica oleracea HOM05D009214 ORTHO05D024265 1.6e-07 61.2 116 37.9
Dinv17960 Davidia involucrata HOM05D000003 ORTHO05D000006 1.6e-07 61.2 67 35.8
BcaB06g27132 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-07 60.8 93 35.5
BcaB07g33945 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 60.8 62 46.8
BcaC02g11124 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-07 60.8 70 40.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 2.0e-07 60.8 66 42.4
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 2.7e-07 60.5 63 44.4
C05p16970 Brassica napus HOM05D009214 ORTHO05D024265 2.7e-07 60.5 244 29.5
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 3.5e-07 60.1 50 48.0
BcaC05g27164 Brassica carinata HOM05D000003 ORTHO05D000006 4.6e-07 59.7 61 42.6
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-07 59.7 64 40.6
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-07 59.7 61 42.6
Dinv43698 Davidia involucrata HOM05D000003 ORTHO05D000006 4.6e-07 59.7 66 40.9
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-07 59.3 323 26.0
Carub.0005s0877 Capsella rubella HOM05D000003 ORTHO05D000006 5.9e-07 59.3 53 43.4
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 1.0e-06 58.5 88 36.4
BcaB02g10751 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-06 58.2 61 37.7
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 1.3e-06 58.2 61 41.0
C02p64250 Brassica napus HOM05D009521 ORTHO05D039737 1.3e-06 58.2 90 40.0
C05p17450 Brassica napus HOM05D017968 ORTHO05D020075 1.3e-06 58.2 68 41.2
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-06 58.2 61 44.3
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 57.8 71 38.0
Aa31LG8G10670 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.7e-06 57.8 55 43.6
BcaB06g26355 Brassica carinata HOM05D009521 ORTHO05D013247 1.7e-06 57.8 70 44.3
BcaB08g34297 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 57.8 65 40.0
BcaC01g04220 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-06 57.8 65 38.5
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-06 57.8 81 43.2
Aa31sc174G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 86 30.2
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-06 57.4 65 36.9
BcaB07g33381 Brassica carinata HOM05D000003 ORTHO05D000006 2.3e-06 57.4 45 48.9
A03p57130 Brassica napus HOM05D009214 ORTHO05D000411 2.3e-06 57.4 86 33.7
BolC7t41849H Brassica oleracea HOM05D000003 ORTHO05D000006 2.3e-06 57.4 60 40.0
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 2.3e-06 57.4 112 30.4
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.3e-06 57.4 67 37.3
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.3e-06 57.4 78 42.3
BcaB02g11325 Brassica carinata HOM05D009214 ORTHO05D013521 2.9e-06 57.0 113 32.7
Aa31LG2G18920 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-06 56.6 73 35.6
Aa31LG4G8300 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-06 56.6 71 38.0
BcaC07g37122 Brassica carinata HOM05D009214 ORTHO05D027576 3.9e-06 56.6 83 33.7
BcaC07g37730 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-06 56.2 57 45.6
BolC7t43207H Brassica oleracea HOM05D000496 ORTHO05D000411 5.0e-06 56.2 150 30.0
Carub.0002s0756 Capsella rubella HOM05D000003 ORTHO05D000006 5.0e-06 56.2 53 39.6
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 55.8 71 38.0
Aa31sc16G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 55.8 63 33.3
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 6.6e-06 55.8 345 22.3
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 6.6e-06 55.8 85 35.3
C03p32630 Brassica napus HOM05D000496 ORTHO05D000411 6.6e-06 55.8 90 31.1
C08p02090 Brassica napus HOM05D009521 ORTHO05D013247 6.6e-06 55.8 190 34.7
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 6.6e-06 55.8 90 31.1
FvH4_3g32112 Fragaria vesca HOM05D000003 ORTHO05D000006 6.6e-06 55.8 70 37.1
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-06 55.5 97 35.1
Aa31sc369G10 Aethionema arabicum HOM05D000003 ORTHO05D000411 8.6e-06 55.5 64 42.2
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 8.6e-06 55.5 94 38.3
A05p25540 Brassica napus HOM05D009214 ORTHO05D013521 8.6e-06 55.5 115 30.4


User provided reference genes

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